RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 C18orf15Q96N68 181 aa12.92□□□□□ -0.34
XRCC3-209ENST00000554913 IGHV3-35A0A0C4DH35 117 aa12.91□□□□□ -0.34
XRCC3-209ENST00000554913 H3BRM9 83 aa12.91□□□□□ -0.34
XRCC3-209ENST00000554913 IGLC6P0CF74 106 aa12.91□□□□□ -0.34
XRCC3-209ENST00000554913 RPL7P18124 248 aaKnown RBP12.91□□□□□ -0.34
XRCC3-209ENST00000554913 KIR3DS1Q14943 382 aa12.91□□□□□ -0.34
XRCC3-209ENST00000554913 ARPC1AQ92747 370 aa12.91□□□□□ -0.34
XRCC3-209ENST00000554913 A6NDN8 102 aa12.91□□□□□ -0.34
XRCC3-209ENST00000554913 NCBP2LA6PVI3 153 aaKnown RBP12.91□□□□□ -0.34
XRCC3-209ENST00000554913 UFSP1Q6NVU6 142 aa12.91□□□□□ -0.34
XRCC3-209ENST00000554913 NBASA2RRP1 2371 aa12.9□□□□□ -0.34
XRCC3-209ENST00000554913 MED13LQ71F56 2210 aa12.9□□□□□ -0.34
XRCC3-209ENST00000554913 ATRXP46100 2492 aa12.9□□□□□ -0.34
XRCC3-209ENST00000554913 SAP30O75446 220 aa12.9□□□□□ -0.34
XRCC3-209ENST00000554913 ORM1P02763 201 aa12.9□□□□□ -0.34
XRCC3-209ENST00000554913 HSD52Q0P140 79 aa12.9□□□□□ -0.34
XRCC3-209ENST00000554913 RNF185Q96GF1 192 aa12.9□□□□□ -0.34
XRCC3-209ENST00000554913 ZNF48Q96MX3 618 aaPredicted RBP12.9□□□□□ -0.34
XRCC3-209ENST00000554913 AP1S3Q96PC3 154 aa12.9□□□□□ -0.34
XRCC3-209ENST00000554913 CHD8Q9HCK8 2581 aa12.9□□□□□ -0.34
XRCC3-209ENST00000554913 GRNP28799 593 aaKnown RBP12.9□□□□□ -0.34
XRCC3-209ENST00000554913 ZNF562Q6V9R5 426 aa12.9□□□□□ -0.34
XRCC3-209ENST00000554913 OR9G4Q8NGQ1 327 aa12.9□□□□□ -0.34
XRCC3-209ENST00000554913 RAB37Q96AX2 223 aa12.9□□□□□ -0.34
XRCC3-209ENST00000554913 CTSGP08311 255 aa12.89□□□□□ -0.35
XRCC3-209ENST00000554913 BMI1P35226 326 aa12.89□□□□□ -0.35
XRCC3-209ENST00000554913 CACNA1BQ00975 2339 aa12.89□□□□□ -0.35
XRCC3-209ENST00000554913 CEACAM3P40198 252 aa12.89□□□□□ -0.35
XRCC3-209ENST00000554913 DYNAPQ8N1N2 210 aa12.89□□□□□ -0.35
XRCC3-209ENST00000554913 TTC9CQ8N5M4 171 aa12.89□□□□□ -0.35
XRCC3-209ENST00000554913 PPIFP30405 207 aaKnown RBP12.88□□□□□ -0.35
XRCC3-209ENST00000554913 ERCC8Q13216 396 aa12.88□□□□□ -0.35
XRCC3-209ENST00000554913 PSMG3-AS1Q96PY0 264 aa12.88□□□□□ -0.35
XRCC3-209ENST00000554913 A0A0G2JLM5 398 aa12.88□□□□□ -0.35
XRCC3-209ENST00000554913 K7ERU9 68 aa12.88□□□□□ -0.35
XRCC3-209ENST00000554913 EVI2AP22794 236 aa12.88□□□□□ -0.35
XRCC3-209ENST00000554913 TM4SF20Q53R12 229 aa12.88□□□□□ -0.35
XRCC3-209ENST00000554913 ODF3BA8MYP8 253 aa12.87□□□□□ -0.35
XRCC3-209ENST00000554913 SIVA1O15304 175 aa12.87□□□□□ -0.35
XRCC3-209ENST00000554913 GTF2H5Q6ZYL4 71 aa12.87□□□□□ -0.35
XRCC3-209ENST00000554913 OR4X2Q8NGF9 303 aa12.87□□□□□ -0.35
XRCC3-209ENST00000554913 NCOR2Q9Y618 2525 aa12.87□□□□□ -0.35
XRCC3-209ENST00000554913 PRAC2D3DTV9 90 aa12.87□□□□□ -0.35
XRCC3-209ENST00000554913 GATA1P15976 413 aaPredicted RBP12.87□□□□□ -0.35
XRCC3-209ENST00000554913 LEPP41159 167 aa12.87□□□□□ -0.35
XRCC3-209ENST00000554913 SVIPQ8NHG7 77 aa12.87□□□□□ -0.35
XRCC3-209ENST00000554913 TTTY13Q9BZ97 58 aa12.87□□□□□ -0.35
XRCC3-209ENST00000554913 MEGF9Q9H1U4 602 aa12.87□□□□□ -0.35
XRCC3-209ENST00000554913 MAP1LC3AQ9H492 121 aa12.87□□□□□ -0.35
XRCC3-209ENST00000554913 IGKV2D-26A0A0A0MRZ7 120 aa12.86□□□□□ -0.35
XRCC3-209ENST00000554913 FAM90A27PA6NNH2 459 aa12.86□□□□□ -0.35
XRCC3-209ENST00000554913 K7EP34 96 aa12.86□□□□□ -0.35
XRCC3-209ENST00000554913 TNFRSF6BO95407 300 aa12.85□□□□□ -0.35
XRCC3-209ENST00000554913 SMIM15Q7Z3B0 74 aa12.85□□□□□ -0.35
XRCC3-209ENST00000554913 FABP5P3A8MUU1 101 aa12.85□□□□□ -0.35
XRCC3-209ENST00000554913 PRTN3P24158 256 aa12.85□□□□□ -0.35
XRCC3-209ENST00000554913 RNF182Q8N6D2 247 aa12.85□□□□□ -0.35
XRCC3-209ENST00000554913 OR2K2Q8NGT1 345 aa12.85□□□□□ -0.35
XRCC3-209ENST00000554913 FBLL1A6NHQ2 334 aaKnown RBP12.84□□□□□ -0.35
XRCC3-209ENST00000554913 ODF1Q14990 250 aa12.84□□□□□ -0.35
XRCC3-209ENST00000554913 VKORC1Q9BQB6 163 aa12.84□□□□□ -0.35
XRCC3-209ENST00000554913 CNFNQ9BYD5 112 aa12.84□□□□□ -0.35
XRCC3-209ENST00000554913 HHLA3Q9XRX5 114 aa12.84□□□□□ -0.35
XRCC3-209ENST00000554913 FCER1GP30273 86 aa12.84□□□□□ -0.35
XRCC3-209ENST00000554913 NPFFR1Q9GZQ6 430 aa12.84□□□□□ -0.35
XRCC3-209ENST00000554913 PRSS1P07477 247 aa12.83□□□□□ -0.36
XRCC3-209ENST00000554913 IL17RELQ6ZVW7 336 aa12.83□□□□□ -0.36
XRCC3-209ENST00000554913 IGHV3-66A0A0C4DH42 116 aa12.83□□□□□ -0.36
XRCC3-209ENST00000554913 M0R1W7 72 aa12.83□□□□□ -0.36
XRCC3-209ENST00000554913 VMO1Q7Z5L0 202 aa12.83□□□□□ -0.36
XRCC3-209ENST00000554913 Q8N6K4 173 aa12.83□□□□□ -0.36
XRCC3-209ENST00000554913 IGHV7-81A0A0B4J1V7 117 aa12.82□□□□□ -0.36
XRCC3-209ENST00000554913 LINC01546A6NGU7 62 aa12.82□□□□□ -0.36
XRCC3-209ENST00000554913 SRSF2Q01130 221 aaKnown RBP12.82□□□□□ -0.36
XRCC3-209ENST00000554913 CSTL1Q9H114 145 aa12.82□□□□□ -0.36
XRCC3-209ENST00000554913 ZMAT4Q9H898 229 aa12.82□□□□□ -0.36
XRCC3-209ENST00000554913 SVEP1Q4LDE5 3571 aa12.82□□□□□ -0.36
XRCC3-209ENST00000554913 A0A1W2PPM0 123 aa12.82□□□□□ -0.36
XRCC3-209ENST00000554913 S100A7P31151 101 aa12.82□□□□□ -0.36
XRCC3-209ENST00000554913 RIPPLY3P57055 190 aa12.82□□□□□ -0.36
XRCC3-209ENST00000554913 DTX2Q86UW9 622 aa12.82□□□□□ -0.36
XRCC3-209ENST00000554913 IGHV3OR16-13A0A075B7E8 117 aa12.81□□□□□ -0.36
XRCC3-209ENST00000554913 IGHV3-74A0A0B4J1X5 117 aa12.81□□□□□ -0.36
XRCC3-209ENST00000554913 GCSHP23434 173 aa12.81□□□□□ -0.36
XRCC3-209ENST00000554913 FXYD2P54710 66 aa12.81□□□□□ -0.36
XRCC3-209ENST00000554913 TMEM158Q8WZ71 300 aa12.81□□□□□ -0.36
XRCC3-209ENST00000554913 TIMD4Q96H15 378 aa12.81□□□□□ -0.36
XRCC3-209ENST00000554913 NXT2Q9NPJ8 142 aaKnown RBP12.81□□□□□ -0.36
XRCC3-209ENST00000554913 C11orf21Q9P2W6 132 aa12.81□□□□□ -0.36
XRCC3-209ENST00000554913 SPCS1Q9Y6A9 102 aa12.81□□□□□ -0.36
XRCC3-209ENST00000554913 TMEM11P17152 192 aa12.81□□□□□ -0.36
XRCC3-209ENST00000554913 LINC01559Q495D7 138 aa12.81□□□□□ -0.36
XRCC3-209ENST00000554913 FOXC2Q99958 501 aa12.81□□□□□ -0.36
XRCC3-209ENST00000554913 ASH1LQ9NR48 2969 aaKnown RBP12.8□□□□□ -0.36
XRCC3-209ENST00000554913 IGKV3D-20A0A0C4DH25 116 aa12.8□□□□□ -0.36
XRCC3-209ENST00000554913 TRGV3P03979 118 aa12.8□□□□□ -0.36
XRCC3-209ENST00000554913 GTSCR1Q86UQ5 136 aa12.8□□□□□ -0.36
XRCC3-209ENST00000554913 PIFOQ8TCI5 191 aa12.8□□□□□ -0.36
XRCC3-209ENST00000554913 C15orf32Q32M92 178 aa12.8□□□□□ -0.36
XRCC3-209ENST00000554913 CCDC144NLQ6NUI1 221 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms