RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 XGP55808 180 aa7.13□□□□□ -1.27
AL049839.2-201ENST00000553947 RBPMS2Q6ZRY4 209 aaKnown RBP7.13□□□□□ -1.27
AL049839.2-201ENST00000553947 CHAC1Q9BUX1 264 aa7.13□□□□□ -1.27
AL049839.2-201ENST00000553947 LTAP01374 205 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 FOXI1Q12951 378 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 LY6DQ14210 128 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 SIGLEC8Q9NYZ4 499 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 ONECUT1Q9UBC0 465 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 SIGLEC9Q9Y336 463 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 A0A1W2PPR1 153 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 TCRBV4S1A1TA0A5B7 111 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 NPIPB6E9PJ23 425 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 MOSP00540 346 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 KLRD1Q13241 179 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 ZNF502Q8TBZ5 544 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 PRELID3AQ96N28 172 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 FBXL15Q9H469 300 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 E9PLD3 99 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 LY6LH3BQJ8 138 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 RPL27AP46776 148 aaKnown RBP7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 SUB1P53999 127 aaKnown RBP eCLIP7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 LCNL1Q6ZST4 164 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 C8orf46Q8TAG6 207 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 CDIP1Q9H305 208 aa7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 SOX21Q9Y651 276 aaPredicted RBP7.12□□□□□ -1.27
AL049839.2-201ENST00000553947 CHD8Q9HCK8 2581 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 FSTL3O95633 263 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 FAM106CPP0CH98 169 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 COL8A1P27658 744 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 IFI27P40305 119 aaPredicted RBP7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 LGALS9BQ3B8N2 356 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 FAM106AQ4KMX7 169 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 LGALS9CQ6DKI2 356 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 C11orf71Q6IPW1 123 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 THAP8Q8NA92 274 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 LY6G5BQ8NDX9 201 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 RPEQ96AT9 228 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 PAXXQ9BUH6 204 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 TEX22C9J3V5 150 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 PVRIGQ6DKI7 326 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 PPP1R27Q86WC6 154 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 RAB1BQ9H0U4 201 aa7.11□□□□□ -1.27
AL049839.2-201ENST00000553947 NCOR2Q9Y618 2525 aa7.1□□□□□ -1.27
AL049839.2-201ENST00000553947 TRBV20-1A0A075B6N2 111 aa7.1□□□□□ -1.27
AL049839.2-201ENST00000553947 COX7A2P2O60397 106 aa7.1□□□□□ -1.27
AL049839.2-201ENST00000553947 C10orf113Q5VZT2 155 aa7.1□□□□□ -1.27
AL049839.2-201ENST00000553947 SFTA2Q6UW10 78 aa7.1□□□□□ -1.27
AL049839.2-201ENST00000553947 MRPL32Q9BYC8 188 aaKnown RBP7.1□□□□□ -1.27
AL049839.2-201ENST00000553947 ASH1LQ9NR48 2969 aaKnown RBP7.1□□□□□ -1.27
AL049839.2-201ENST00000553947 TIMM23O14925 209 aa7.1□□□□□ -1.27
AL049839.2-201ENST00000553947 LOXL1Q08397 574 aaPredicted RBP7.1□□□□□ -1.27
AL049839.2-201ENST00000553947 ODF1Q14990 250 aa7.1□□□□□ -1.27
AL049839.2-201ENST00000553947 LINC00322Q6ZN03 302 aaPredicted RBP7.1□□□□□ -1.27
AL049839.2-201ENST00000553947 DKK2Q9UBU2 259 aa7.1□□□□□ -1.27
AL049839.2-201ENST00000553947 PGPA6NDG6 321 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 GAGE12JA6NER3 117 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 NDUFS7O75251 213 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 GAGE7O76087 117 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 RBP4P02753 201 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 GAGE12FP0CL80 117 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 GAGE12GP0CL81 117 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 GAGE12IP0CL82 117 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 ID1P41134 155 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 GAGE4Q13068 117 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 ZNF329Q86UD4 541 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 CEND1Q8N111 149 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 IFI27L1Q96BM0 104 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 TM2D2Q9BX73 214 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 NPIPB5A8MRT5 1133 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 J3KRW8 73 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 BRI3O95415 125 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 ORM2P19652 201 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 LINC00305Q7Z4B0 112 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 ITPR1Q14643 2758 aa7.09□□□□□ -1.27
AL049839.2-201ENST00000553947 C12orf74Q32Q52 190 aa7.09□□□□□ -1.28
AL049839.2-201ENST00000553947 TTC32Q5I0X7 151 aa7.09□□□□□ -1.28
AL049839.2-201ENST00000553947 SRSF12Q8WXF0 261 aaKnown RBP7.09□□□□□ -1.28
AL049839.2-201ENST00000553947 FXYD5Q96DB9 178 aa7.09□□□□□ -1.28
AL049839.2-201ENST00000553947 HIST1H4GQ99525 98 aa7.09□□□□□ -1.28
AL049839.2-201ENST00000553947 ABCA1O95477 2261 aa7.09□□□□□ -1.28
AL049839.2-201ENST00000553947 TRBV25-1A0A075B6N4 114 aa7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 PRSS1P07477 247 aa7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 Q6AWC8 147 aa7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 OR1L4Q8NGR5 311 aa7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 PHLDA1Q8WV24 401 aaPredicted RBP7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 YAE1D1Q9NRH1 226 aa7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 EPDR1Q9UM22 224 aa7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 TMSB15BA0A087X1C1 80 aa7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 LOC107984156A0A0G2JMH3 177 aa7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 A0A1B0GUT8 65 aa7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 ARL17AQ8IVW1 177 aa7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 CFHR4Q92496 578 aa7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 TIMD4Q96H15 378 aa7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 HIVEP3Q5T1R4 2406 aa7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 SPTBN1Q01082 2364 aaKnown RBP7.08□□□□□ -1.28
AL049839.2-201ENST00000553947 IGKV2D-26A0A0A0MRZ7 120 aa7.07□□□□□ -1.28
AL049839.2-201ENST00000553947 H3BTX0 84 aa7.07□□□□□ -1.28
AL049839.2-201ENST00000553947 RIGQ13278 110 aa7.07□□□□□ -1.28
AL049839.2-201ENST00000553947 PLGLAQ15195 96 aa7.07□□□□□ -1.28
AL049839.2-201ENST00000553947 GTSCR1Q86UQ5 136 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms