RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 CECR9P0C854 216 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 CFC1BP0CG36 223 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 CFC1P0CG37 223 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 GLRXP35754 106 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 EFNA4P52798 201 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 UCNP55089 124 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 HIST1H4AP62805 103 aaKnown RBP4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 HERVK_113P63121 156 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 RPL39P5Q59GN2 51 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 ZNF474Q6S9Z5 364 aaPredicted RBP4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 LYZL1Q6UWQ5 148 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 LYPD1Q8N2G4 141 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 OR13C6PQ8NH95 151 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 KLF14Q8TD94 323 aaPredicted RBP4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 CEP192Q8TEP8 1941 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 ARHGEF17Q96PE2 2063 aaPredicted RBP4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 FOXC2Q99958 501 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 PRADC1Q9BSG0 188 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 MRPL36Q9P0J6 103 aaKnown RBP4.08□□□□□ -1.76
LSM3P2-201ENST00000551246 TET2Q6N021 2002 aaPredicted RBP4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 TRAV8-2A0A0B4J237 113 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 TRAV8-4A0A0B4J246 113 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 A0A0J9YY99 117 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 TRBV10-2A0A0K0K1G8 114 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 IQCF6A8MYZ5 107 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 F5H768 121 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 F8VRH5 84 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 H7C1H1 209 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 MRPS12O15235 138 aaKnown RBP4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 IGHV3-13P01766 116 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 IGHV3-30P01768 117 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 IGHV3-33P01772 117 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 IGHV3-30-5P0DP03 117 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 CRIP2P52943 208 aaPredicted RBP4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 FXYD7P58549 80 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 TFF2Q03403 129 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 Q5XG85 94 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 LINC00305Q7Z4B0 112 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 C5orf38Q86SI9 138 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 NRACQ8N912 160 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 NEXN-AS1Q8NBZ9 246 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 IGFBPL1Q8WX77 278 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 PLEKHB2Q96CS7 222 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 SGK494Q96LW2 274 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 PRR25Q96S07 402 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 AMELXQ99217 191 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 RPP25Q9BUL9 199 aaKnown RBP4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 PLA2G2FQ9BZM2 168 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 AKIRIN1Q9H9L7 192 aaPredicted RBP4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 PCSK5Q92824 1860 aa4.07□□□□□ -1.76
LSM3P2-201ENST00000551246 RP1P56715 2156 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 TRAV8-1A0A0A6YYK1 113 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 IGHV3-43A0A0B4J1X8 118 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 TRAV2A0A0B4J234 112 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 A0A0B4J2C4 111 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 NCBP2LA6PVI3 153 aaKnown RBP4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 DUX1O43812 170 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 GAS8-AS1O95177 125 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 TNFRSF6BO95407 300 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 OXTP01178 125 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 PRSS1P07477 247 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 IGHV3-43DP0DP04 118 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 CKS2P33552 79 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 C17orf58Q2M2W7 97 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 LINC01620Q4KN68 170 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 SIGLEC15Q6ZMC9 328 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 TRPT1Q86TN4 253 aaKnown RBP4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 CD177Q8N6Q3 437 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 SLC25A29Q8N8R3 303 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 TMEM167AQ8TBQ9 72 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 NTN5Q8WTR8 489 aaPredicted RBP4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 TMEM263Q8WUH6 116 aaKnown RBP4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 IMMP1LQ96LU5 166 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 DUX5Q96PT3 197 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 CHCHD5Q9BSY4 110 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 DCTN5Q9BTE1 182 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 DEFB126Q9BYW3 111 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 AAMDCQ9H7C9 122 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 TMEM160Q9NX00 188 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 RNF186Q9NXI6 227 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 TIMM8BQ9Y5J9 83 aaPredicted RBP4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 UNC13CQ8NB66 2214 aa4.06□□□□□ -1.76
LSM3P2-201ENST00000551246 MYO9BQ13459 2157 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 TRBV19A0A075B6N1 114 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 IGHV4-4A0A075B6R2 117 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 RBAKDNA6NC62 111 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 DEFB108AA8MXU0 73 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 C5orf67F2Z3F1 127 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 SMKR1H3BMG3 65 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 H3BT86 120 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 CXCL13O43927 109 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 SCGB2A1O75556 95 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 CCL3P10147 92 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 COX7CP15954 63 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 CXCL5P42830 114 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 SUB1P53999 127 aaKnown RBP eCLIP4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 MFAP4P55083 255 aa4.05□□□□□ -1.76
LSM3P2-201ENST00000551246 ERCC8Q13216 396 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms