RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 TMEM136Q6ZRR5 245 aa6.93□□□□□ -1.3
TMEM116-205ENST00000547878 FAM231DQ6ZW35 169 aa6.93□□□□□ -1.3
TMEM116-205ENST00000547878 SSX8Q7RTT4 187 aa6.93□□□□□ -1.3
TMEM116-205ENST00000547878 FAM216BQ8N7L0 139 aa6.93□□□□□ -1.3
TMEM116-205ENST00000547878 OR13C6PQ8NH95 151 aa6.93□□□□□ -1.3
TMEM116-205ENST00000547878 TMEM167AQ8TBQ9 72 aa6.93□□□□□ -1.3
TMEM116-205ENST00000547878 FAM167A-AS1Q96KT0 104 aa6.93□□□□□ -1.3
TMEM116-205ENST00000547878 TNCP24821 2201 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 CADP27708 2225 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 A0A087X0K7 114 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 HSBP1O75506 76 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 ACTL6BO94805 426 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 MOSP00540 346 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 AMY1AP04745 511 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 PRTN3P24158 256 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 CD40P25942 277 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 IER3P46695 156 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 RPS28P62857 69 aaKnown RBP6.92□□□□□ -1.3
TMEM116-205ENST00000547878 KRTAP24-1Q3LI83 254 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 PDPNQ86YL7 162 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 LINC00311Q8N616 119 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 THAP8Q8NA92 274 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 CFHR4Q92496 578 aa6.92□□□□□ -1.3
TMEM116-205ENST00000547878 MT-ATP8P03928 68 aa6.91□□□□□ -1.3
TMEM116-205ENST00000547878 MYOD1P15172 320 aa6.91□□□□□ -1.3
TMEM116-205ENST00000547878 NDUFV3P56181 108 aaKnown RBP6.91□□□□□ -1.3
TMEM116-205ENST00000547878 ERHP84090 104 aaKnown RBP6.91□□□□□ -1.3
TMEM116-205ENST00000547878 PSMG4Q5JS54 123 aa6.91□□□□□ -1.3
TMEM116-205ENST00000547878 FAM201AQ5SY85 155 aa6.91□□□□□ -1.3
TMEM116-205ENST00000547878 IBA57Q5T440 356 aaKnown RBP6.91□□□□□ -1.3
TMEM116-205ENST00000547878 PVRIGQ6DKI7 326 aa6.91□□□□□ -1.3
TMEM116-205ENST00000547878 SYT8Q8NBV8 401 aa6.91□□□□□ -1.3
TMEM116-205ENST00000547878 OR4C13Q8NGP0 309 aa6.91□□□□□ -1.3
TMEM116-205ENST00000547878 OR1L4Q8NGR5 311 aa6.91□□□□□ -1.3
TMEM116-205ENST00000547878 GTSF1Q8WW33 167 aa6.91□□□□□ -1.3
TMEM116-205ENST00000547878 TMEM190Q8WZ59 177 aa6.91□□□□□ -1.3
TMEM116-205ENST00000547878 CCL13Q99616 98 aa6.91□□□□□ -1.3
TMEM116-205ENST00000547878 SLC25A2Q9BXI2 301 aa6.91□□□□□ -1.3
TMEM116-205ENST00000547878 MRPL20Q9BYC9 149 aaKnown RBP6.91□□□□□ -1.3
TMEM116-205ENST00000547878 SVEP1Q4LDE5 3571 aa6.91□□□□□ -1.3
TMEM116-205ENST00000547878 H3BMG7 143 aa6.9□□□□□ -1.3
TMEM116-205ENST00000547878 SMIM13P0DJ93 91 aa6.9□□□□□ -1.3
TMEM116-205ENST00000547878 UBE2L3P68036 154 aaKnown RBP6.9□□□□□ -1.3
TMEM116-205ENST00000547878 ATP5G2Q06055 141 aa6.9□□□□□ -1.3
TMEM116-205ENST00000547878 MOB3BQ86TA1 216 aa6.9□□□□□ -1.3
TMEM116-205ENST00000547878 OR9G1Q8NH87 305 aa6.9□□□□□ -1.3
TMEM116-205ENST00000547878 RNF125Q96EQ8 232 aa6.9□□□□□ -1.3
TMEM116-205ENST00000547878 SPANXDQ9BXN6 97 aa6.9□□□□□ -1.3
TMEM116-205ENST00000547878 SAP30LQ9HAJ7 183 aa6.9□□□□□ -1.3
TMEM116-205ENST00000547878 SOX21Q9Y651 276 aaPredicted RBP6.9□□□□□ -1.3
TMEM116-205ENST00000547878 TCRBV4S1A1TA0A5B7 111 aa6.9□□□□□ -1.31
TMEM116-205ENST00000547878 IZUMO1RA6ND01 250 aa6.9□□□□□ -1.31
TMEM116-205ENST00000547878 BMPR1BO00238 502 aa6.9□□□□□ -1.31
TMEM116-205ENST00000547878 FSTL3O95633 263 aa6.9□□□□□ -1.31
TMEM116-205ENST00000547878 XGP55808 180 aa6.9□□□□□ -1.31
TMEM116-205ENST00000547878 SRSF2Q01130 221 aaKnown RBP6.9□□□□□ -1.31
TMEM116-205ENST00000547878 ATP5L2Q7Z4Y8 100 aa6.9□□□□□ -1.31
TMEM116-205ENST00000547878 FLYWCH2Q96CP2 140 aaKnown RBP6.9□□□□□ -1.31
TMEM116-205ENST00000547878 CCL19Q99731 98 aa6.9□□□□□ -1.31
TMEM116-205ENST00000547878 ASCL2Q99929 193 aa6.9□□□□□ -1.31
TMEM116-205ENST00000547878 RNASE7Q9H1E1 156 aaKnown RBP6.9□□□□□ -1.31
TMEM116-205ENST00000547878 UBTD1Q9HAC8 227 aa6.9□□□□□ -1.31
TMEM116-205ENST00000547878 DYSFO75923 2080 aa6.89□□□□□ -1.31
TMEM116-205ENST00000547878 C17orf100A8MU93 164 aa6.89□□□□□ -1.31
TMEM116-205ENST00000547878 E9PLD3 99 aa6.89□□□□□ -1.31
TMEM116-205ENST00000547878 J3KT08 172 aa6.89□□□□□ -1.31
TMEM116-205ENST00000547878 APCSP02743 223 aa6.89□□□□□ -1.31
TMEM116-205ENST00000547878 NTF3P20783 257 aa6.89□□□□□ -1.31
TMEM116-205ENST00000547878 MYCNOSP40205 109 aa6.89□□□□□ -1.31
TMEM116-205ENST00000547878 SUB1P53999 127 aaKnown RBP eCLIP6.89□□□□□ -1.31
TMEM116-205ENST00000547878 ST6GALNAC6Q969X2 333 aa6.89□□□□□ -1.31
TMEM116-205ENST00000547878 CHCHD1Q96BP2 118 aaKnown RBP6.89□□□□□ -1.31
TMEM116-205ENST00000547878 MAP1LC3CQ9BXW4 147 aa6.89□□□□□ -1.31
TMEM116-205ENST00000547878 MDFICQ9P1T7 246 aa6.89□□□□□ -1.31
TMEM116-205ENST00000547878 PRO0461Q9UI25 63 aa6.89□□□□□ -1.31
TMEM116-205ENST00000547878 IGKV1D-37A0A075B6S9 117 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 CGB1A6NKQ9 187 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 CCDC179H3BU77 68 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 PEX7O00628 323 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 COX7A2P2O60397 106 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 OR2J3O76001 311 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 IGLV2-23P01705 113 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 FRMD6-AS1P0C7T7 363 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 FAM106CPP0CH98 169 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 IFITM1P13164 125 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 WT1-ASQ06250 92 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 WFDC2Q14508 124 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 FAM106AQ4KMX7 169 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 CT83Q5H943 113 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 C10orf113Q5VZT2 155 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 ZNF329Q86UD4 541 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 PPP1R27Q86WC6 154 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 FAM19A2Q8N3H0 131 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 RPEQ96AT9 228 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 FXYD5Q96DB9 178 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 ZC2HC1AQ96GY0 325 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 C7orf69Q9H7B7 122 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 ZNF355PQ9NSJ1 428 aa6.88□□□□□ -1.31
TMEM116-205ENST00000547878 AMMECR1Q9Y4X0 333 aaPredicted RBP6.88□□□□□ -1.31
TMEM116-205ENST00000547878 CR1P17927 2039 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms