RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PRB3Q04118 309 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-218ENST00000537641 C5orf64Q2M2E5 130 aa9.47□□□□□ -0.89
CPSF7-218ENST00000537641 ZNF672Q499Z4 452 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-218ENST00000537641 C21orf62Q9NYP8 219 aa9.47□□□□□ -0.89
CPSF7-218ENST00000537641 SMPXQ9UHP9 88 aa9.47□□□□□ -0.89
CPSF7-218ENST00000537641 ATP5LO75964 103 aa9.46□□□□□ -0.89
CPSF7-218ENST00000537641 SMIM13P0DJ93 91 aa9.46□□□□□ -0.89
CPSF7-218ENST00000537641 FABP2P12104 132 aa9.46□□□□□ -0.89
CPSF7-218ENST00000537641 EVI2AP22794 236 aa9.46□□□□□ -0.89
CPSF7-218ENST00000537641 ODF1Q14990 250 aa9.46□□□□□ -0.89
CPSF7-218ENST00000537641 PCP2Q8IVA1 136 aa9.46□□□□□ -0.89
CPSF7-218ENST00000537641 TTC9CQ8N5M4 171 aa9.46□□□□□ -0.89
CPSF7-218ENST00000537641 PSMG3-AS1Q96PY0 264 aa9.46□□□□□ -0.89
CPSF7-218ENST00000537641 DKK2Q9UBU2 259 aa9.46□□□□□ -0.89
CPSF7-218ENST00000537641 GRNP28799 593 aaKnown RBP9.45□□□□□ -0.9
CPSF7-218ENST00000537641 ZNF80P51504 273 aaPredicted RBP9.45□□□□□ -0.9
CPSF7-218ENST00000537641 ARPC1AQ92747 370 aa9.45□□□□□ -0.9
CPSF7-218ENST00000537641 ONECUT1Q9UBC0 465 aa9.45□□□□□ -0.9
CPSF7-218ENST00000537641 ADGRG4Q8IZF6 3080 aa9.45□□□□□ -0.9
CPSF7-218ENST00000537641 ANKHD1Q8IWZ3 2542 aaKnown RBP9.45□□□□□ -0.9
CPSF7-218ENST00000537641 FABP5P3A8MUU1 101 aa9.45□□□□□ -0.9
CPSF7-218ENST00000537641 LYNX1G3V0Z9 82 aa9.45□□□□□ -0.9
CPSF7-218ENST00000537641 KALRNO60229 2985 aa9.45□□□□□ -0.9
CPSF7-218ENST00000537641 LYNX1P0DP58 116 aa9.45□□□□□ -0.9
CPSF7-218ENST00000537641 FXYD7P58549 80 aa9.45□□□□□ -0.9
CPSF7-218ENST00000537641 ZNF562Q6V9R5 426 aa9.45□□□□□ -0.9
CPSF7-218ENST00000537641 BCL6BQ8N143 479 aaPredicted RBP9.45□□□□□ -0.9
CPSF7-218ENST00000537641 RAB37Q96AX2 223 aa9.45□□□□□ -0.9
CPSF7-218ENST00000537641 SMG1Q96Q15 3661 aaKnown RBP9.44□□□□□ -0.9
CPSF7-218ENST00000537641 RBAKDNA6NC62 111 aa9.44□□□□□ -0.9
CPSF7-218ENST00000537641 ODF3BA8MYP8 253 aa9.44□□□□□ -0.9
CPSF7-218ENST00000537641 M0R1W7 72 aa9.44□□□□□ -0.9
CPSF7-218ENST00000537641 TNFRSF6BO95407 300 aa9.44□□□□□ -0.9
CPSF7-218ENST00000537641 IGKCP01834 107 aa9.44□□□□□ -0.9
CPSF7-218ENST00000537641 LEPP41159 167 aa9.44□□□□□ -0.9
CPSF7-218ENST00000537641 RAB9AP51151 201 aa9.44□□□□□ -0.9
CPSF7-218ENST00000537641 ADORA2A-AS1P86434 159 aa9.44□□□□□ -0.9
CPSF7-218ENST00000537641 KLF17Q5JT82 389 aaPredicted RBP9.44□□□□□ -0.9
CPSF7-218ENST00000537641 Q8N8P6 123 aa9.44□□□□□ -0.9
CPSF7-218ENST00000537641 VGLL1Q99990 258 aa9.44□□□□□ -0.9
CPSF7-218ENST00000537641 CHAC1Q9BUX1 264 aa9.44□□□□□ -0.9
CPSF7-218ENST00000537641 DPM2O94777 84 aa9.43□□□□□ -0.9
CPSF7-218ENST00000537641 PRB4P10163 310 aaPredicted RBP9.43□□□□□ -0.9
CPSF7-218ENST00000537641 SRSF1Q07955 248 aaKnown RBP eCLIP9.43□□□□□ -0.9
CPSF7-218ENST00000537641 SAMD5Q5TGI4 173 aa9.43□□□□□ -0.9
CPSF7-218ENST00000537641 PRSS57Q6UWY2 283 aa9.43□□□□□ -0.9
CPSF7-218ENST00000537641 ZNF575Q86XF7 245 aa9.43□□□□□ -0.9
CPSF7-218ENST00000537641 Q8TAT8 98 aa9.43□□□□□ -0.9
CPSF7-218ENST00000537641 SMAD5-AS1Q9Y6J3 95 aa9.43□□□□□ -0.9
CPSF7-218ENST00000537641 S4R3C0 116 aa9.43□□□□□ -0.9
CPSF7-218ENST00000537641 PRSS47A8MTI9 375 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 OOSP1A8MZH6 123 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 IGHG4P01861 327 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 ORM1P02763 201 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 TAL2Q16559 108 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 C18orf15Q96N68 181 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 NAA38Q9BRA0 125 aaKnown RBP9.42□□□□□ -0.9
CPSF7-218ENST00000537641 HHLA3Q9XRX5 114 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 GCSHP23434 173 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 FXYD2P54710 66 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 TCTAP57738 103 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 HES1Q14469 280 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 CCDC144NLQ6NUI1 221 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 TM2D2Q9BX73 214 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 IGF2RP11717 2491 aa9.42□□□□□ -0.9
CPSF7-218ENST00000537641 IGLV2-18A0A075B6J9 118 aa9.41□□□□□ -0.9
CPSF7-218ENST00000537641 IGKV2D-26A0A0A0MRZ7 120 aa9.41□□□□□ -0.9
CPSF7-218ENST00000537641 PRSS1P07477 247 aa9.41□□□□□ -0.9
CPSF7-218ENST00000537641 RIPPLY3P57055 190 aa9.41□□□□□ -0.9
CPSF7-218ENST00000537641 NDPQ00604 133 aa9.41□□□□□ -0.9
CPSF7-218ENST00000537641 CDSNQ15517 529 aa9.41□□□□□ -0.9
CPSF7-218ENST00000537641 WFDC3Q8IUB2 231 aa9.41□□□□□ -0.9
CPSF7-218ENST00000537641 Q8N6K4 173 aa9.41□□□□□ -0.9
CPSF7-218ENST00000537641 TMEM158Q8WZ71 300 aa9.41□□□□□ -0.9
CPSF7-218ENST00000537641 FOXC2Q99958 501 aa9.41□□□□□ -0.9
CPSF7-218ENST00000537641 SLC50A1Q9BRV3 221 aa9.41□□□□□ -0.9
CPSF7-218ENST00000537641 SPTA1P02549 2419 aa9.41□□□□□ -0.9
CPSF7-218ENST00000537641 TMEM238C9JI98 176 aa9.4□□□□□ -0.9
CPSF7-218ENST00000537641 CTSGP08311 255 aa9.4□□□□□ -0.9
CPSF7-218ENST00000537641 PRTN3P24158 256 aa9.4□□□□□ -0.9
CPSF7-218ENST00000537641 EBI3Q14213 229 aa9.4□□□□□ -0.9
CPSF7-218ENST00000537641 CEND1Q8N111 149 aa9.4□□□□□ -0.9
CPSF7-218ENST00000537641 PHLDA1Q8WV24 401 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-218ENST00000537641 TIMD4Q96H15 378 aa9.4□□□□□ -0.9
CPSF7-218ENST00000537641 MSRB1Q9NZV6 116 aa9.4□□□□□ -0.9
CPSF7-218ENST00000537641 TRBV25-1A0A075B6N4 114 aa9.39□□□□□ -0.91
CPSF7-218ENST00000537641 HLA-DMBP28068 263 aa9.39□□□□□ -0.91
CPSF7-218ENST00000537641 KLK9Q2XQG4 91 aa9.39□□□□□ -0.91
CPSF7-218ENST00000537641 IL17RELQ6ZVW7 336 aa9.39□□□□□ -0.91
CPSF7-218ENST00000537641 DYNAPQ8N1N2 210 aa9.39□□□□□ -0.91
CPSF7-218ENST00000537641 MRPL53Q96EL3 112 aaKnown RBP9.39□□□□□ -0.91
CPSF7-218ENST00000537641 KLK9Q9UKQ9 250 aa9.39□□□□□ -0.91
CPSF7-218ENST00000537641 LINC01619G3V211 115 aa9.39□□□□□ -0.91
CPSF7-218ENST00000537641 KLRD1Q13241 179 aa9.39□□□□□ -0.91
CPSF7-218ENST00000537641 ZC2HC1BQ5TFG8 222 aa9.39□□□□□ -0.91
CPSF7-218ENST00000537641 C11orf71Q6IPW1 123 aa9.39□□□□□ -0.91
CPSF7-218ENST00000537641 A0A1W2PRD5 423 aa9.38□□□□□ -0.91
CPSF7-218ENST00000537641 A0A1W2PRF3 423 aa9.38□□□□□ -0.91
CPSF7-218ENST00000537641 A0A1W2PRM7 423 aa9.38□□□□□ -0.91
CPSF7-218ENST00000537641 GAS8-AS1O95177 125 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms