RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 LINC01545Q5VT33 79 aa9.22□□□□□ -0.93
ATM-222ENST00000533733 Q71RC1 249 aaPredicted RBP9.22□□□□□ -0.93
ATM-222ENST00000533733 CACNA1AO00555 2505 aa9.22□□□□□ -0.93
ATM-222ENST00000533733 D6R8Y8 96 aa9.22□□□□□ -0.93
ATM-222ENST00000533733 IGHG2P01859 326 aa9.22□□□□□ -0.93
ATM-222ENST00000533733 ORM1P02763 201 aa9.22□□□□□ -0.93
ATM-222ENST00000533733 TRGV3P03979 118 aa9.22□□□□□ -0.93
ATM-222ENST00000533733 IGLL1P15814 213 aa9.22□□□□□ -0.93
ATM-222ENST00000533733 MRPL51Q4U2R6 128 aaKnown RBP9.22□□□□□ -0.93
ATM-222ENST00000533733 SPOCK3Q9BQ16 436 aa9.22□□□□□ -0.93
ATM-222ENST00000533733 DCHS2Q6V1P9 2916 aa9.21□□□□□ -0.93
ATM-222ENST00000533733 TMSB15BA0A087X1C1 80 aa9.21□□□□□ -0.94
ATM-222ENST00000533733 TRAV40A0A0B4J280 105 aa9.21□□□□□ -0.94
ATM-222ENST00000533733 IGHV4-61A0A0C4DH41 118 aa9.21□□□□□ -0.94
ATM-222ENST00000533733 M0QZ24 198 aa9.21□□□□□ -0.94
ATM-222ENST00000533733 ARL3P36405 182 aa9.21□□□□□ -0.94
ATM-222ENST00000533733 TWIST1Q15672 202 aa9.21□□□□□ -0.94
ATM-222ENST00000533733 SAMD13Q5VXD3 122 aa9.21□□□□□ -0.94
ATM-222ENST00000533733 C8orf86Q6ZUL3 223 aa9.21□□□□□ -0.94
ATM-222ENST00000533733 Q8TAT8 98 aa9.21□□□□□ -0.94
ATM-222ENST00000533733 PIFOQ8TCI5 191 aa9.21□□□□□ -0.94
ATM-222ENST00000533733 PMCHL2Q9BQD1 86 aa9.21□□□□□ -0.94
ATM-222ENST00000533733 ZNF747Q9BV97 191 aa9.21□□□□□ -0.94
ATM-222ENST00000533733 A0A0G2JLM5 398 aa9.2□□□□□ -0.94
ATM-222ENST00000533733 TMEM213A2RRL7 107 aa9.2□□□□□ -0.94
ATM-222ENST00000533733 A6NDX4 124 aa9.2□□□□□ -0.94
ATM-222ENST00000533733 CSN3P07498 182 aa9.2□□□□□ -0.94
ATM-222ENST00000533733 CKS2P33552 79 aa9.2□□□□□ -0.94
ATM-222ENST00000533733 ZNF80P51504 273 aaPredicted RBP9.2□□□□□ -0.94
ATM-222ENST00000533733 SMIM15Q7Z3B0 74 aa9.2□□□□□ -0.94
ATM-222ENST00000533733 GLMPQ8WWB7 406 aa9.2□□□□□ -0.94
ATM-222ENST00000533733 NCOR2Q9Y618 2525 aa9.2□□□□□ -0.94
ATM-222ENST00000533733 TRBV7-9A0A0J9YWB2 115 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 LINC01546A6NGU7 62 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 LINC01548A6NM66 108 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 TCF21O43680 179 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 HBDP02042 147 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 MSMBP08118 114 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 HLA-DMBP28068 263 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 ATP5J2P56134 94 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 CACNG7P62955 275 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 AMN1Q8IY45 258 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 ATOH7Q8N100 152 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 LINC00477Q96M19 166 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 MAP1LC3AQ9H492 121 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 SIGLEC8Q9NYZ4 499 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 TRAV8-2A0A0B4J237 113 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 IGHV3-35A0A0C4DH35 117 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 B4DSR2 109 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 OVOL1O14753 267 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 IFI27P40305 119 aaPredicted RBP9.19□□□□□ -0.94
ATM-222ENST00000533733 LGALS9BQ3B8N2 356 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 LGALS9CQ6DKI2 356 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 SLC25A34Q6PIV7 304 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 C16orf92Q96LL3 132 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 AGPAT4-IT1Q9H0P7 198 aa9.19□□□□□ -0.94
ATM-222ENST00000533733 NXT2Q9NPJ8 142 aaKnown RBP9.19□□□□□ -0.94
ATM-222ENST00000533733 ABCA2Q9BZC7 2435 aa9.18□□□□□ -0.94
ATM-222ENST00000533733 TACC2O95359 2948 aa9.18□□□□□ -0.94
ATM-222ENST00000533733 PRAC2D3DTV9 90 aa9.18□□□□□ -0.94
ATM-222ENST00000533733 SLC25A16P16260 332 aa9.18□□□□□ -0.94
ATM-222ENST00000533733 PPIFP30405 207 aaKnown RBP9.18□□□□□ -0.94
ATM-222ENST00000533733 TMEM219Q86XT9 240 aa9.18□□□□□ -0.94
ATM-222ENST00000533733 OR1N2Q8NGR9 330 aa9.18□□□□□ -0.94
ATM-222ENST00000533733 IGHV4-4A0A075B6R2 117 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 DLEU1O43261 78 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 ZNF25P17030 456 aaPredicted RBP9.17□□□□□ -0.94
ATM-222ENST00000533733 BATFQ16520 125 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 IGFL4Q6B9Z1 124 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 LINC00173Q6ZV60 143 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 IL17RELQ6ZVW7 336 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 DEFB125Q8N687 156 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 PSMG3-AS1Q96PY0 264 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 IGHV3OR16-8A0A075B7F1 116 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 TMEM89A2RUT3 159 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 SNAI2O43623 268 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 ERCC8Q13216 396 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 MAJINQ3KP22 176 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 C12orf54Q6X4T0 127 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 BRD3OSQ6XYD6 125 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 RNF182Q8N6D2 247 aa9.17□□□□□ -0.94
ATM-222ENST00000533733 PRSS47A8MTI9 375 aa9.16□□□□□ -0.94
ATM-222ENST00000533733 ZNF575Q86XF7 245 aa9.16□□□□□ -0.94
ATM-222ENST00000533733 OR10J6PQ8NGY7 276 aa9.16□□□□□ -0.94
ATM-222ENST00000533733 SCRT2Q9NQ03 307 aa9.16□□□□□ -0.94
ATM-222ENST00000533733 A0A096LNJ9 63 aa9.15□□□□□ -0.94
ATM-222ENST00000533733 H3BUX3 64 aa9.15□□□□□ -0.94
ATM-222ENST00000533733 J3QLI3 93 aa9.15□□□□□ -0.94
ATM-222ENST00000533733 K7EMT4 169 aa9.15□□□□□ -0.94
ATM-222ENST00000533733 IGLV1-40P01703 118 aa9.15□□□□□ -0.94
ATM-222ENST00000533733 IGHV4-38-2P0DP08 117 aa9.15□□□□□ -0.94
ATM-222ENST00000533733 MED14OSP0DP75 135 aa9.15□□□□□ -0.94
ATM-222ENST00000533733 RNF185Q96GF1 192 aa9.15□□□□□ -0.94
ATM-222ENST00000533733 TMEM208Q9BTX3 173 aa9.15□□□□□ -0.94
ATM-222ENST00000533733 IGHV4-30-2A0A087WSY4 118 aa9.14□□□□□ -0.95
ATM-222ENST00000533733 IGKV3D-20A0A0C4DH25 116 aa9.14□□□□□ -0.95
ATM-222ENST00000533733 IGHV3-66A0A0C4DH42 116 aa9.14□□□□□ -0.95
ATM-222ENST00000533733 LOC389332A0A1B0GUA5 103 aa9.14□□□□□ -0.95
ATM-222ENST00000533733 NPYP01303 97 aa9.14□□□□□ -0.95
ATM-222ENST00000533733 PRR31Q5SQ13 230 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms