RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 BRWD1Q9NSI6 2320 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 EML6Q6ZMW3 1958 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 A0A087WSZ3 146 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 E7EUB6 86 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 TRACP01848 142 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 LINC00694P0DN24 101 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 ETV6P41212 452 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 GUCA1AP43080 201 aaPredicted RBP1.82□□□□□ -2.12
USP47-211ENST00000531513 CIRBPQ14011 172 aaKnown RBP1.82□□□□□ -2.12
USP47-211ENST00000531513 GLIPR1L1Q6UWM5 242 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 C2orf82Q6UX34 121 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 ATOH7Q8N100 152 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 Q8N2B8 174 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 Q8N814 137 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 C4orf3Q8WVX3 66 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 SAR1AQ9NR31 198 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 CCDC167Q9P0B6 97 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 XIRP1Q702N8 1843 aaKnown RBP1.82□□□□□ -2.12
USP47-211ENST00000531513 TNS3Q68CZ2 1445 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 ANKRD31Q8N7Z5 1873 aa1.82□□□□□ -2.12
USP47-211ENST00000531513 ANAPC1Q9H1A4 1944 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 SCN8AQ9UQD0 1980 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 RBP4P02753 201 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 CCL4P13236 92 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 BLCAPP62952 87 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 MRPS10P82664 201 aaKnown RBP1.81□□□□□ -2.12
USP47-211ENST00000531513 NEDD8Q15843 81 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 C1orf137Q5JT78 98 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 C1orf134Q5TEV5 83 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 OR5AK2Q8NH90 309 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 ZNF431Q8TF32 576 aaPredicted RBP1.81□□□□□ -2.12
USP47-211ENST00000531513 GGACTQ9BVM4 153 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 NIT2Q9NQR4 276 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 METTL1Q9UBP6 276 aaKnown RBP1.81□□□□□ -2.12
USP47-211ENST00000531513 FN1P02751 2386 aaKnown RBP1.81□□□□□ -2.12
USP47-211ENST00000531513 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 ROCK2O75116 1388 aaKnown RBP1.81□□□□□ -2.12
USP47-211ENST00000531513 TMEM2Q9UHN6 1383 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 NAIPQ13075 1403 aa1.81□□□□□ -2.12
USP47-211ENST00000531513 TCRBV4S1A1TA0A5B7 111 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 ZNF670-ZNF695F2Z2N8 137 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 CDC42EP2O14613 210 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 GNG7O60262 68 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 SLC25A4P12235 298 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 PLGLB1Q02325 96 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 DIAPH2-AS1Q14236 149 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 SCIMPQ6UWF3 145 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 ARPINQ7Z6K5 226 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 CLECL1Q8IZS7 167 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 ZNF563Q8TA94 476 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 CLEC2BQ92478 149 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 RAB37Q96AX2 223 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 TCEAL7Q9BRU2 100 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 REG4Q9BYZ8 158 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 SLC35B3Q9H1N7 401 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 COMMD3Q9UBI1 195 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 IBTKQ9P2D0 1353 aaPredicted RBP1.8□□□□□ -2.12
USP47-211ENST00000531513 PTPRGP23470 1445 aa1.8□□□□□ -2.12
USP47-211ENST00000531513 MRPS14O60783 128 aaKnown RBP1.79□□□□□ -2.12
USP47-211ENST00000531513 ERC2-IT1O76042 136 aa1.79□□□□□ -2.12
USP47-211ENST00000531513 APODP05090 189 aa1.79□□□□□ -2.12
USP47-211ENST00000531513 CKS2P33552 79 aa1.79□□□□□ -2.12
USP47-211ENST00000531513 PCBD1P61457 104 aa1.79□□□□□ -2.12
USP47-211ENST00000531513 SNRPD3P62318 126 aaKnown RBP1.79□□□□□ -2.12
USP47-211ENST00000531513 IZUMO2Q6UXV1 221 aa1.79□□□□□ -2.12
USP47-211ENST00000531513 OR5AS1Q8N127 324 aa1.79□□□□□ -2.12
USP47-211ENST00000531513 C10orf111Q8N326 155 aa1.79□□□□□ -2.12
USP47-211ENST00000531513 NAA38Q9BRA0 125 aaKnown RBP1.79□□□□□ -2.12
USP47-211ENST00000531513 DNAJC15Q9Y5T4 150 aa1.79□□□□□ -2.12
USP47-211ENST00000531513 CHCHD2Q9Y6H1 151 aaPredicted RBP1.79□□□□□ -2.12
USP47-211ENST00000531513 GRIN2AQ12879 1464 aa1.79□□□□□ -2.12
USP47-211ENST00000531513 ZNF518AQ6AHZ1 1483 aa1.79□□□□□ -2.12
USP47-211ENST00000531513 FAM135AQ9P2D6 1515 aa1.79□□□□□ -2.12
USP47-211ENST00000531513 MICAL3Q7RTP6 2002 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 COL1A1P02452 1464 aaPredicted RBP1.78□□□□□ -2.12
USP47-211ENST00000531513 TRBV20-1A0A075B6N2 111 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 TRAV10A0A0B4J240 114 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 BBIP1A8MTZ0 92 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 HYPMO75409 117 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 FGF7P21781 194 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 CCSMST1Q4G0I0 132 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.78□□□□□ -2.12
USP47-211ENST00000531513 COPS9Q8WXC6 57 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 NABP2Q9BQ15 211 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 CST11Q9H112 138 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 RERGLQ9H628 205 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 MED9Q9NWA0 146 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 GNG8Q9UK08 70 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 MPC1Q9Y5U8 109 aa1.78□□□□□ -2.12
USP47-211ENST00000531513 MYO5AQ9Y4I1 1855 aaKnown RBP1.77□□□□□ -2.13
USP47-211ENST00000531513 RIMS1Q86UR5 1692 aaKnown RBP1.77□□□□□ -2.13
USP47-211ENST00000531513 EIF4G3O43432 1585 aaKnown RBP1.77□□□□□ -2.13
USP47-211ENST00000531513 TRBV6-8A0A0A6YYG3 113 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 FAM236AA0A1B0GUQ0 79 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 FAM236BA0A1B0GV22 79 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 IFITM5A6NNB3 132 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 IGF2P01344 180 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 PYYP10082 97 aa1.77□□□□□ -2.13
USP47-211ENST00000531513 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms