RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 GPHB5Q86YW7 130 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 SBSPONQ8IVN8 264 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 CMTM2Q8TAZ6 248 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 C18orf32Q8TCD1 76 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 C20orf78Q9BR46 151 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 XAGE1AQ9HD64 81 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 IL36BQ9NZH7 164 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 EPDR1Q9UM22 224 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 KIF1AQ12756 1690 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 ITSN2Q9NZM3 1697 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.2□□□□□ -2.06
PTPRK-220ENST00000531466 DOCK3Q8IZD9 2030 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 NUP210LQ5VU65 1888 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 COL1A1P02452 1464 aaPredicted RBP2.2□□□□□ -2.06
PTPRK-220ENST00000531466 SUPT6HQ7KZ85 1726 aaKnown RBP2.2□□□□□ -2.06
PTPRK-220ENST00000531466 SHANK3Q9BYB0 1731 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 CEP170Q5SW79 1584 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 ZSWIM8A7E2V4 1837 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 MYH1P12882 1939 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 PPLO60437 1756 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 ABCC6O95255 1503 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 KCPQ6ZWJ8 1503 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 A0A0D9SEW6 157 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 MUC21A0A0G2JKD1 596 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 MUC21A0A140T8X8 626 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 SNRPGP15A8MWD9 76 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 BUB1B-PAK6H3BSN5 160 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 H3BUT2 72 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 SDCBPO00560 298 aaPredicted RBP2.19□□□□□ -2.06
PTPRK-220ENST00000531466 FAUP35544 74 aaKnown RBP2.19□□□□□ -2.06
PTPRK-220ENST00000531466 FGF12P61328 243 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 PCBD1P61457 104 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 RSPO1Q2MKA7 263 aaPredicted RBP2.19□□□□□ -2.06
PTPRK-220ENST00000531466 LINC01554Q52M75 96 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 CASC10Q5T4H9 136 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 MIC13Q5XKP0 118 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 C5orf38Q86SI9 138 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 OR5AS1Q8N127 324 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 FAM213BQ8TBF2 198 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 STAG3L4Q8TBR4 150 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 C7orf33Q8WU49 177 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 DIRC1Q969H9 104 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 LSM10Q969L4 123 aaKnown RBP2.19□□□□□ -2.06
PTPRK-220ENST00000531466 SPTSSAQ969W0 71 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 ZC2HC1AQ96GY0 325 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 DSCR8Q96T75 97 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 NPCDR1Q9BY65 106 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 PLA2G12AQ9BZM1 189 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 OSTCQ9NRP0 149 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 TAS2R4Q9NYW5 299 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 TP73-AS1Q9UF72 201 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 ZNF835Q9Y2P0 537 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 V9GYH0 126 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 CC2D2AQ9P2K1 1620 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 BIVM-ERCC5R4GMW8 1640 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 MYH9P35579 1960 aaKnown RBP2.19□□□□□ -2.06
PTPRK-220ENST00000531466 COL24A1Q17RW2 1714 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 CEP170BQ9Y4F5 1589 aaPredicted RBP2.19□□□□□ -2.06
PTPRK-220ENST00000531466 LAMC3Q9Y6N6 1575 aa2.19□□□□□ -2.06
PTPRK-220ENST00000531466 GTF3C1Q12789 2109 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 MYO3AQ8NEV4 1616 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 THSD7BQ9C0I4 1608 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 IGKV1D-43A0A0B4J1Z2 117 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 IGKV1-9A0A0C4DH69 117 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 K7ERJ3 54 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 NDUFC1O43677 76 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 OR1I1O60431 355 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 TCL1BO95988 128 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 C1QAP02745 245 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 SAA1P0DJI8 122 aaPredicted RBP2.18□□□□□ -2.06
PTPRK-220ENST00000531466 PIPP12273 146 aaPredicted RBP2.18□□□□□ -2.06
PTPRK-220ENST00000531466 COL8A2P25067 703 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 SSR2P43308 183 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 CCL8P80075 99 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 CIRBPQ14011 172 aaKnown RBP2.18□□□□□ -2.06
PTPRK-220ENST00000531466 ETDBQ3ZM63 59 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 ASB16-AS1Q495Z4 193 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 MPV17L2Q567V2 206 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 TMEM136Q6ZRR5 245 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 MARCH3Q86UD3 253 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 OR8B3Q8NGG8 313 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 FGF13Q92913 245 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 TRGV9Q99603 122 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 KLK5Q9Y337 293 aaPredicted RBP2.18□□□□□ -2.06
PTPRK-220ENST00000531466 LINC00588Q9Y4M8 146 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 F11RQ9Y624 299 aaKnown RBP2.18□□□□□ -2.06
PTPRK-220ENST00000531466 LY96Q9Y6Y9 160 aa2.18□□□□□ -2.06
PTPRK-220ENST00000531466 CHD2O14647 1828 aaKnown RBP2.18□□□□□ -2.06
PTPRK-220ENST00000531466 PPRC1Q5VV67 1664 aaKnown RBP2.18□□□□□ -2.06
PTPRK-220ENST00000531466 EFCAB6Q5THR3 1501 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 ABCA5Q8WWZ7 1642 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 ECM29Q5VYK3 1845 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 IGHV3OR15-7A0A075B7D8 119 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 IGHV3-74A0A0B4J1X5 117 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 NAP1L6A6NFF2 107 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 INS-IGF2F8WCM5 200 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 J3QLW9 94 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 CREBL2O60519 120 aaPredicted RBP2.17□□□□□ -2.06
PTPRK-220ENST00000531466 TIMM17BO60830 172 aa2.17□□□□□ -2.06
PTPRK-220ENST00000531466 ZNF737O75373 536 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms