RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 ADGRL3Q9HAR2 1447 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 KIAA1107Q9UPP5 1409 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 ZFHX3Q15911 3703 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 DOCK2Q92608 1830 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 K7ERJ3 54 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 TAX1BP3O14907 124 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 GGCTO75223 188 aaKnown RBP-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 CRHP06850 196 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 OR10J4P0C629 311 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 IDO1P14902 403 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 SRP14P37108 136 aaKnown RBP-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 ETV6P41212 452 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 SERPINB9P50453 376 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 RAB5CP51148 216 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 INSL3P51460 131 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 MAGOHP61326 146 aaKnown RBP-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 LSM6P62312 80 aaKnown RBP-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 RHOBP62745 196 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 HIST1H3AP68431 136 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 H3F3AP84243 136 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 ZNF56Q15929 161 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 CASC2Q6XLA1 102 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 CCL4L1Q8NHW4 92 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 BORCS7Q96B45 105 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 CHCHD1Q96BP2 118 aaKnown RBP-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 ZHX1-C8orf76Q96EF9 292 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 DCUN1D1Q96GG9 259 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 ATP6V1G3Q96LB4 118 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 CMSS1Q9BQ75 279 aaKnown RBP-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 CCDC90BQ9GZT6 254 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 TCEAL2Q9H3H9 227 aaPredicted RBP-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 PARVBQ9HBI1 364 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 UQCC1Q9NVA1 299 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 GLTPQ9NZD2 209 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 OPTCQ9UBM4 332 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 VPS29Q9UBQ0 182 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 BOKQ9UMX3 212 aaPredicted RBP-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 PRELID3BQ9Y3B1 194 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 ATP6V1DQ9Y5K8 247 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 ARL5AQ9Y689 179 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 RYR1P21817 5038 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 VPS13DQ5THJ4 4388 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 LAMC1P11047 1609 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 TCOF1Q13428 1488 aaKnown RBP-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 ARAP1Q96P48 1450 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 IFT172Q9UG01 1749 aa-0.35□□□□□ -2.47
CSDE1-210ENST00000525878 DOPEY1Q5JWR5 2465 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 DSPPQ9NZW4 1301 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 RNF213Q63HN8 5207 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 MXRA5Q9NR99 2828 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 FAT3Q8TDW7 4589 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 CREBBPQ92793 2442 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 CDK13Q14004 1512 aaKnown RBP-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 LOC101927531A0A1B0GV80 90 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 DUXBA0A1W2PPF3 345 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 PRORSD1PA6NEY8 169 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 FAM159BA6NKW6 160 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 PDE6DO43924 150 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 TNNC2P02585 160 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 TCRBP04435 133 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 CXCL1P09341 107 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 RPS3P23396 243 aaKnown RBP eCLIP-0.36□□□□□ -2.471e-6■■□□□ 13
CSDE1-210ENST00000525878 OMPP47874 163 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 ARPP19P56211 112 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 MYL5Q02045 173 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 KLRD1Q13241 179 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 TMED1Q13445 227 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 EDDM3AQ14507 147 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 TMEM97Q5BJF2 176 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 LYRM7Q5U5X0 104 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 Q5XG85 94 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 CSAG1Q6PB30 78 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 S100A7AQ86SG5 101 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 LRRC18Q8N456 261 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 DDI1Q8WTU0 396 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 NAT14Q8WUY8 206 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 PRAP1Q96NZ9 151 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 LYSTQ99698 3801 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 NPCDR1Q9BY65 106 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 MRPS26Q9BYN8 205 aaKnown RBP-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 IMUPQ9GZP8 106 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 CST11Q9H112 138 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 TAF9BQ9HBM6 251 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 POPDC3Q9HBV1 291 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 TMEM14BQ9NUH8 114 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 MRPL35Q9NZE8 188 aaKnown RBP-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 USH2AO75445 5202 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 SETD2Q9BYW2 2564 aaPredicted RBP-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 RTL9Q8NET4 1388 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 EPPK1P58107 5090 aaKnown RBP-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 PRDM2Q13029 1718 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 PLB1Q6P1J6 1458 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 TCHHQ07283 1943 aa-0.36□□□□□ -2.47
CSDE1-210ENST00000525878 KDM5AP29375 1690 aaKnown RBP-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 PTPRGP23470 1445 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 UHRF1BP1Q6BDS2 1440 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 DOCK1Q14185 1865 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 TRAV5A0A0B4J249 113 aa-0.37□□□□□ -2.47
CSDE1-210ENST00000525878 M0R036 132 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms