RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 SERF1AO75920 110 aa17.79■□□□□ 0.44
SLIT3-204ENST00000518140 LGALS1P09382 135 aaKnown RBP17.79■□□□□ 0.44
SLIT3-204ENST00000518140 ZNF705DP0CH99 300 aaPredicted RBP17.79■□□□□ 0.44
SLIT3-204ENST00000518140 ZNF705BP0CI00 300 aaPredicted RBP17.79■□□□□ 0.44
SLIT3-204ENST00000518140 Q86TA4 180 aa17.79■□□□□ 0.44
SLIT3-204ENST00000518140 GPHB5Q86YW7 130 aa17.79■□□□□ 0.44
SLIT3-204ENST00000518140 IGHV4OR15-8A0A075B7B6 117 aa17.79■□□□□ 0.44
SLIT3-204ENST00000518140 A0A087WW49 117 aa17.79■□□□□ 0.44
SLIT3-204ENST00000518140 IGKV2-40A0A087WW87 121 aaPredicted RBP17.79■□□□□ 0.44
SLIT3-204ENST00000518140 ZNF253O75346 499 aa17.79■□□□□ 0.44
SLIT3-204ENST00000518140 IGKV2D-40P01614 121 aaPredicted RBP17.79■□□□□ 0.44
SLIT3-204ENST00000518140 Q6ZWC4 215 aa17.79■□□□□ 0.44
SLIT3-204ENST00000518140 TRAV8-2A0A0B4J237 113 aa17.78■□□□□ 0.44
SLIT3-204ENST00000518140 COX19Q49B96 90 aa17.78■□□□□ 0.44
SLIT3-204ENST00000518140 FAM106AQ4KMX7 169 aa17.78■□□□□ 0.44
SLIT3-204ENST00000518140 WDR73Q6P4I2 378 aa17.78■□□□□ 0.44
SLIT3-204ENST00000518140 MT-ND6P03923 174 aa17.78■□□□□ 0.44
SLIT3-204ENST00000518140 FRMD6-AS1P0C7T7 363 aa17.78■□□□□ 0.44
SLIT3-204ENST00000518140 PSG3Q16557 428 aa17.78■□□□□ 0.44
SLIT3-204ENST00000518140 IBA57Q5T440 356 aaKnown RBP17.78■□□□□ 0.44
SLIT3-204ENST00000518140 BAGE3Q86Y29 109 aa17.78■□□□□ 0.44
SLIT3-204ENST00000518140 RHPN1-AS1Q9BWJ2 59 aa17.78■□□□□ 0.44
SLIT3-204ENST00000518140 DAZ1Q9NQZ3 744 aaKnown RBP17.78■□□□□ 0.44
SLIT3-204ENST00000518140 HIVEP1P15822 2718 aa17.77■□□□□ 0.44
SLIT3-204ENST00000518140 IGHV7-4-1A0A0J9YVY3 117 aa17.77■□□□□ 0.44
SLIT3-204ENST00000518140 PRAC2D3DTV9 90 aa17.77■□□□□ 0.44
SLIT3-204ENST00000518140 CHEK1O14757 476 aa17.77■□□□□ 0.44
SLIT3-204ENST00000518140 EREGO14944 169 aa17.77■□□□□ 0.44
SLIT3-204ENST00000518140 LCN12Q6JVE5 192 aa17.77■□□□□ 0.44
SLIT3-204ENST00000518140 C8orf86Q6ZUL3 223 aa17.77■□□□□ 0.44
SLIT3-204ENST00000518140 TMEM75Q8N9X5 138 aa17.77■□□□□ 0.44
SLIT3-204ENST00000518140 PSG8Q9UQ74 426 aa17.77■□□□□ 0.44
SLIT3-204ENST00000518140 SETD2Q9BYW2 2564 aaPredicted RBP17.76■□□□□ 0.43
SLIT3-204ENST00000518140 CA1P00915 261 aaPredicted RBP17.76■□□□□ 0.43
SLIT3-204ENST00000518140 CSN1S1P47710 185 aa17.76■□□□□ 0.43
SLIT3-204ENST00000518140 DEFB136Q30KP8 78 aa17.76■□□□□ 0.43
SLIT3-204ENST00000518140 NUDT10Q8NFP7 164 aa17.76■□□□□ 0.43
SLIT3-204ENST00000518140 NUDT11Q96G61 164 aa17.76■□□□□ 0.43
SLIT3-204ENST00000518140 RNASE1P07998 156 aaKnown RBP17.76■□□□□ 0.43
SLIT3-204ENST00000518140 NUTF2P61970 127 aaKnown RBP17.76■□□□□ 0.43
SLIT3-204ENST00000518140 SMPXQ9UHP9 88 aa17.76■□□□□ 0.43
SLIT3-204ENST00000518140 VGLL1Q99990 258 aa17.75■□□□□ 0.43
SLIT3-204ENST00000518140 SNHG12Q9BXW3 62 aa17.75■□□□□ 0.43
SLIT3-204ENST00000518140 TEX43Q6ZNM6 134 aa17.75■□□□□ 0.43
SLIT3-204ENST00000518140 TRBV6-1A0A0K0K1D8 114 aa17.74■□□□□ 0.43
SLIT3-204ENST00000518140 K7EMT4 169 aa17.74■□□□□ 0.43
SLIT3-204ENST00000518140 K7EQM0 130 aa17.74■□□□□ 0.43
SLIT3-204ENST00000518140 M0R143 59 aa17.74■□□□□ 0.43
SLIT3-204ENST00000518140 SYNJ2BPP57105 145 aa17.74■□□□□ 0.43
SLIT3-204ENST00000518140 TMEM136Q6ZRR5 245 aa17.74■□□□□ 0.43
SLIT3-204ENST00000518140 NAT8BQ9UHF3 227 aa17.74■□□□□ 0.43
SLIT3-204ENST00000518140 IGKV3-7A0A075B6H7 116 aa17.73■□□□□ 0.43
SLIT3-204ENST00000518140 F2Z2F3 143 aa17.73■□□□□ 0.43
SLIT3-204ENST00000518140 HOXD3P31249 432 aaPredicted RBP17.73■□□□□ 0.43
SLIT3-204ENST00000518140 ZNF418Q8TF45 676 aaPredicted RBP17.73■□□□□ 0.43
SLIT3-204ENST00000518140 SMIM12Q96EX1 92 aa17.73■□□□□ 0.43
SLIT3-204ENST00000518140 SMIM27A0A1W2PRY6 76 aa17.73■□□□□ 0.43
SLIT3-204ENST00000518140 A0A1W2PS18 150 aa17.73■□□□□ 0.43
SLIT3-204ENST00000518140 TMEM213A2RRL7 107 aa17.73■□□□□ 0.43
SLIT3-204ENST00000518140 CD33P20138 364 aa17.73■□□□□ 0.43
SLIT3-204ENST00000518140 HILS1P60008 231 aa17.73■□□□□ 0.43
SLIT3-204ENST00000518140 SLC50A1Q9BRV3 221 aa17.73■□□□□ 0.43
SLIT3-204ENST00000518140 SAMD10Q9BYL1 202 aa17.73■□□□□ 0.43
SLIT3-204ENST00000518140 TCL1AP56279 114 aa17.72■□□□□ 0.43
SLIT3-204ENST00000518140 ERCC8Q13216 396 aa17.72■□□□□ 0.43
SLIT3-204ENST00000518140 SCGB2A2Q13296 93 aa17.72■□□□□ 0.43
SLIT3-204ENST00000518140 OR10J3Q5JRS4 329 aa17.72■□□□□ 0.43
SLIT3-204ENST00000518140 FAM231DQ6ZW35 169 aa17.72■□□□□ 0.43
SLIT3-204ENST00000518140 C11orf44Q8N8P7 122 aa17.72■□□□□ 0.43
SLIT3-204ENST00000518140 WIPF2Q8TF74 440 aaPredicted RBP17.72■□□□□ 0.43
SLIT3-204ENST00000518140 ZC2HC1AQ96GY0 325 aa17.72■□□□□ 0.43
SLIT3-204ENST00000518140 GRAMD2BQ96HH9 432 aa17.72■□□□□ 0.43
SLIT3-204ENST00000518140 C8orf49Q96NF6 230 aa17.72■□□□□ 0.43
SLIT3-204ENST00000518140 DUX3Q96PT4 197 aa17.72■□□□□ 0.43
SLIT3-204ENST00000518140 C20orf144Q9BQM9 153 aa17.72■□□□□ 0.43
SLIT3-204ENST00000518140 INAFM1C9JVW0 142 aa17.71■□□□□ 0.43
SLIT3-204ENST00000518140 RAB4AP20338 218 aa17.71■□□□□ 0.43
SLIT3-204ENST00000518140 RPL11P62913 178 aaKnown RBP17.71■□□□□ 0.43
SLIT3-204ENST00000518140 KHDC1LQ5JSQ8 128 aa17.71■□□□□ 0.43
SLIT3-204ENST00000518140 C20orf173Q96LM9 149 aa17.71■□□□□ 0.43
SLIT3-204ENST00000518140 UFC1Q9Y3C8 167 aa17.71■□□□□ 0.43
SLIT3-204ENST00000518140 SPINK4O60575 86 aa17.71■□□□□ 0.43
SLIT3-204ENST00000518140 Q8TAT8 98 aa17.71■□□□□ 0.43
SLIT3-204ENST00000518140 C16orf92Q96LL3 132 aa17.71■□□□□ 0.43
SLIT3-204ENST00000518140 C19orf71A6NCJ1 209 aa17.7■□□□□ 0.42
SLIT3-204ENST00000518140 TCAPO15273 167 aa17.7■□□□□ 0.42
SLIT3-204ENST00000518140 ARL6IP6Q8N6S5 226 aa17.7■□□□□ 0.42
SLIT3-204ENST00000518140 LINC01006Q8NI28 216 aa17.7■□□□□ 0.42
SLIT3-204ENST00000518140 ZFP30Q9Y2G7 519 aa17.7■□□□□ 0.42
SLIT3-204ENST00000518140 GPX1P07203 203 aa17.7■□□□□ 0.42
SLIT3-204ENST00000518140 CRIP1P50238 77 aa17.7■□□□□ 0.42
SLIT3-204ENST00000518140 SLURP1P55000 103 aa17.7■□□□□ 0.42
SLIT3-204ENST00000518140 NEU1Q99519 415 aa17.7■□□□□ 0.42
SLIT3-204ENST00000518140 SOCS3O14543 225 aa17.69■□□□□ 0.42
SLIT3-204ENST00000518140 HLA-DQA1P01909 254 aa17.69■□□□□ 0.42
SLIT3-204ENST00000518140 MRPL52Q86TS9 123 aaKnown RBP17.69■□□□□ 0.42
SLIT3-204ENST00000518140 SERTM2A0A1B0GWG4 89 aa17.68■□□□□ 0.42
SLIT3-204ENST00000518140 IZUMO1RA6ND01 250 aa17.68■□□□□ 0.42
SLIT3-204ENST00000518140 SRSF2Q01130 221 aaKnown RBP17.68■□□□□ 0.42
SLIT3-204ENST00000518140 TDRG1Q3Y452 100 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms