RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 ASXL1Q8IXJ9 1541 aa3.17□□□□□ -1.9
CTNNA1-202ENST00000517533 QRICH2Q9H0J4 1663 aa3.17□□□□□ -1.9
CTNNA1-202ENST00000517533 ARID1AO14497 2285 aa3.17□□□□□ -1.9
CTNNA1-202ENST00000517533 F6UZH7 168 aa3.16□□□□□ -1.9
CTNNA1-202ENST00000517533 IGLV1-51P01701 117 aa3.16□□□□□ -1.9
CTNNA1-202ENST00000517533 HLA-DRB4P13762 266 aa3.16□□□□□ -1.9
CTNNA1-202ENST00000517533 ZNF181Q2M3W8 571 aa3.16□□□□□ -1.9
CTNNA1-202ENST00000517533 TMEM91Q6ZNR0 172 aa3.16□□□□□ -1.9
CTNNA1-202ENST00000517533 LINC00311Q8N616 119 aa3.16□□□□□ -1.9
CTNNA1-202ENST00000517533 POP5Q969H6 163 aaKnown RBP3.16□□□□□ -1.9
CTNNA1-202ENST00000517533 MCEEQ96PE7 176 aa3.16□□□□□ -1.9
CTNNA1-202ENST00000517533 SDF2Q99470 211 aa3.16□□□□□ -1.9
CTNNA1-202ENST00000517533 TCEAL7Q9BRU2 100 aa3.16□□□□□ -1.9
CTNNA1-202ENST00000517533 HLA-DRB4X5D2U9 266 aa3.16□□□□□ -1.9
CTNNA1-202ENST00000517533 PPIP5K1Q6PFW1 1433 aa3.16□□□□□ -1.9
CTNNA1-202ENST00000517533 NSD3Q9BZ95 1437 aa3.16□□□□□ -1.9
CTNNA1-202ENST00000517533 NRXN3Q9Y4C0 1643 aa3.15□□□□□ -1.9
CTNNA1-202ENST00000517533 MALRD1Q5VYJ5 2156 aa3.15□□□□□ -1.9
CTNNA1-202ENST00000517533 CPS1P31327 1500 aa3.15□□□□□ -1.9
CTNNA1-202ENST00000517533 TULP4Q9NRJ4 1543 aa3.15□□□□□ -1.9
CTNNA1-202ENST00000517533 ZNF142P52746 1687 aaPredicted RBP3.15□□□□□ -1.9
CTNNA1-202ENST00000517533 FOCADQ5VW36 1801 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 IGLV2-18A0A075B6J9 118 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 TMSB15BA0A087X1C1 80 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 IGKV2D-26A0A0A0MRZ7 120 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 TRAV1-1A0A0B4J248 108 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 SPAARA0A1B0GVQ0 90 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 LRCOL1A6NCL2 159 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 G3V3Q6 166 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 OR1I1O60431 355 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 ZNF737O75373 536 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 MGST1P10620 155 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 ZNF90Q03938 601 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 SCIMPQ6UWF3 145 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 NHP2Q9NX24 153 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 COA4Q9NYJ1 87 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 EDC4Q6P2E9 1401 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 MYO5AQ9Y4I1 1855 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 PRR14LQ5THK1 2151 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 ATP7BP35670 1465 aa3.15□□□□□ -1.91
CTNNA1-202ENST00000517533 KNDC1Q76NI1 1749 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 CPSF1Q10570 1443 aaKnown RBP3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 ANKARQ7Z5J8 1434 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 HMSDA8MTL9 139 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 METTL15P1P0C7V9 234 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 FABP4P15090 132 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 ROMO1P60602 79 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 ZNF345Q14585 488 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 TEN1Q86WV5 123 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 RPS19BP1Q86WX3 136 aaKnown RBP3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 Q8N814 137 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 CCL4L1Q8NHW4 92 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 DEDD2Q8WXF8 326 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 C20orf166-AS1Q96NR2 134 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 TAS2R4Q9NYW5 299 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 DNAJC15Q9Y5T4 150 aa3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 COL1A1P02452 1464 aaPredicted RBP3.14□□□□□ -1.91
CTNNA1-202ENST00000517533 CPAMD8Q8IZJ3 1885 aa3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 RTL8CO15255 209 aa3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 PMP2P02689 132 aa3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 SMIM6P0DI80 62 aa3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 TPT1P13693 172 aaKnown RBP3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 HINT1P49773 126 aaPredicted RBP3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 LINC00315P59091 139 aa3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 PLGLB1Q02325 96 aa3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 SS18Q15532 418 aa3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 OR5D14Q8NGL3 314 aa3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 OR10AC1Q8NH08 325 aa3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 CLEC2BQ92478 149 aa3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 LINC00467Q9BRT7 94 aa3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 CD163L1Q9NR16 1453 aa3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.13□□□□□ -1.91
CTNNA1-202ENST00000517533 ADGRB2O60241 1585 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 CACNA1DQ01668 2161 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 USP32Q8NFA0 1604 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 MYOM1P52179 1685 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 NKTRP30414 1462 aaKnown RBP3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 IGKV2-28A0A075B6P5 120 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 MUC21A0A0G2JKD1 596 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 MUC21A0A140T8X8 626 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 IGKV2D-28P01615 120 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 CD14P08571 375 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 SLC25A4P12235 298 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 TMEM258P61165 79 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 BLCAPP62952 87 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 MRPS36P82909 103 aaKnown RBP3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 LY6EQ16553 131 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 RNASE10Q5GAN6 216 aaKnown RBP3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 ZNF826PQ6ZT77 177 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 LINC00301Q8NCQ3 95 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 LSM2Q9Y333 95 aaKnown RBP3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 SOX21Q9Y651 276 aaPredicted RBP3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 XRN1Q8IZH2 1706 aaKnown RBP3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 CDC42BPGQ6DT37 1551 aa3.12□□□□□ -1.91
CTNNA1-202ENST00000517533 RGS12O14924 1447 aa3.11□□□□□ -1.91
CTNNA1-202ENST00000517533 IBA57-AS1B1ANH7 110 aa3.11□□□□□ -1.91
CTNNA1-202ENST00000517533 CORTO00230 105 aa3.11□□□□□ -1.91
CTNNA1-202ENST00000517533 CD3DP04234 171 aa3.11□□□□□ -1.91
CTNNA1-202ENST00000517533 CTSGP08311 255 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms