RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 VSIG2Q96IQ7 327 aa10.07□□□□□ -0.8
SCARNA20.5-201ENST00000516991 LINC00477Q96M19 166 aa10.07□□□□□ -0.8
SCARNA20.5-201ENST00000516991 AAMDCQ9H7C9 122 aa10.07□□□□□ -0.8
SCARNA20.5-201ENST00000516991 GSN-AS1Q9NRJ2 163 aa10.07□□□□□ -0.8
SCARNA20.5-201ENST00000516991 LYRM2Q9NU23 88 aaPredicted RBP10.07□□□□□ -0.8
SCARNA20.5-201ENST00000516991 FUT9Q9Y231 359 aa10.07□□□□□ -0.8
SCARNA20.5-201ENST00000516991 TIMM9Q9Y5J7 89 aa10.07□□□□□ -0.8
SCARNA20.5-201ENST00000516991 TRGV1A0A0A0MS02 117 aa10.06□□□□□ -0.8
SCARNA20.5-201ENST00000516991 TCRBP04435 133 aa10.06□□□□□ -0.8
SCARNA20.5-201ENST00000516991 NMBP08949 121 aa10.06□□□□□ -0.8
SCARNA20.5-201ENST00000516991 CRISP2P16562 243 aa10.06□□□□□ -0.8
SCARNA20.5-201ENST00000516991 FGF7P21781 194 aa10.06□□□□□ -0.8
SCARNA20.5-201ENST00000516991 TCL1AP56279 114 aa10.06□□□□□ -0.8
SCARNA20.5-201ENST00000516991 S100A10P60903 97 aa10.06□□□□□ -0.8
SCARNA20.5-201ENST00000516991 ATP6V1FQ16864 119 aa10.06□□□□□ -0.8
SCARNA20.5-201ENST00000516991 IBA57Q5T440 356 aaKnown RBP10.06□□□□□ -0.8
SCARNA20.5-201ENST00000516991 FAM19A4Q96LR4 140 aa10.06□□□□□ -0.8
SCARNA20.5-201ENST00000516991 ICOSQ9Y6W8 199 aa10.06□□□□□ -0.8
SCARNA20.5-201ENST00000516991 IGSF23A1L1A6 192 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 SIVA1O15304 175 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 PLA2G10O15496 165 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 ZNF324O75467 553 aaPredicted RBP10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 NDUFB4O95168 129 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 LINC00315P59091 139 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 KRTAP10-2P60368 255 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 ERCC8Q13216 396 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 BTN1A1Q13410 526 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 TMEM78Q5T7P6 136 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 C9orf47Q6ZRZ4 202 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 TMEM252Q8N6L7 170 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 SEC22CQ9BRL7 303 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 SCRT2Q9NQ03 307 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 NUDT15Q9NV35 164 aa10.05□□□□□ -0.8
SCARNA20.5-201ENST00000516991 TRAV6A0A075B6T7 132 aa10.04□□□□□ -0.8
SCARNA20.5-201ENST00000516991 SPINK4O60575 86 aa10.04□□□□□ -0.8
SCARNA20.5-201ENST00000516991 GPX1P07203 203 aa10.04□□□□□ -0.8
SCARNA20.5-201ENST00000516991 RNASE4P34096 147 aaKnown RBP10.04□□□□□ -0.8
SCARNA20.5-201ENST00000516991 CD300CQ08708 224 aa10.04□□□□□ -0.8
SCARNA20.5-201ENST00000516991 SLAQ13239 276 aa10.04□□□□□ -0.8
SCARNA20.5-201ENST00000516991 ST6GAL2Q96JF0 529 aa10.04□□□□□ -0.8
SCARNA20.5-201ENST00000516991 AGPAT4-IT1Q9H0P7 198 aa10.04□□□□□ -0.8
SCARNA20.5-201ENST00000516991 GPN1Q9HCN4 374 aaPredicted RBP10.04□□□□□ -0.8
SCARNA20.5-201ENST00000516991 RGS13O14921 159 aa10.03□□□□□ -0.8
SCARNA20.5-201ENST00000516991 EREGO14944 169 aa10.03□□□□□ -0.8
SCARNA20.5-201ENST00000516991 PAX4O43316 350 aa10.03□□□□□ -0.8
SCARNA20.5-201ENST00000516991 PYYP10082 97 aa10.03□□□□□ -0.8
SCARNA20.5-201ENST00000516991 RAB32Q13637 225 aa10.03□□□□□ -0.8
SCARNA20.5-201ENST00000516991 BLNKQ8WV28 456 aa10.03□□□□□ -0.8
SCARNA20.5-201ENST00000516991 VGLL1Q99990 258 aa10.03□□□□□ -0.8
SCARNA20.5-201ENST00000516991 ARPC5LQ9BPX5 153 aa10.03□□□□□ -0.8
SCARNA20.5-201ENST00000516991 NPCDR1Q9BY65 106 aa10.03□□□□□ -0.8
SCARNA20.5-201ENST00000516991 KCNIP2Q9NS61 270 aa10.03□□□□□ -0.8
SCARNA20.5-201ENST00000516991 KLF12Q9Y4X4 402 aa10.03□□□□□ -0.8
SCARNA20.5-201ENST00000516991 TRBV7-9A0A0J9YWB2 115 aa10.02□□□□□ -0.81
SCARNA20.5-201ENST00000516991 NXPH4O95158 308 aa10.02□□□□□ -0.81
SCARNA20.5-201ENST00000516991 ZNF415Q09FC8 603 aa10.02□□□□□ -0.81
SCARNA20.5-201ENST00000516991 IL15RAQ13261 267 aa10.02□□□□□ -0.81
SCARNA20.5-201ENST00000516991 ICAM4Q14773 271 aa10.02□□□□□ -0.81
SCARNA20.5-201ENST00000516991 Q6ZRN7 208 aaPredicted RBP10.02□□□□□ -0.81
SCARNA20.5-201ENST00000516991 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.81
SCARNA20.5-201ENST00000516991 ZFAND2AQ8N6M9 145 aa10.02□□□□□ -0.81
SCARNA20.5-201ENST00000516991 PTTG2Q9NZH5 202 aa10.02□□□□□ -0.81
SCARNA20.5-201ENST00000516991 PRO0255Q9UI72 69 aa10.02□□□□□ -0.81
SCARNA20.5-201ENST00000516991 APOBP04114 4563 aaKnown RBP10.02□□□□□ -0.81
SCARNA20.5-201ENST00000516991 IGHV1OR15-1A0A075B7D0 117 aa10.01□□□□□ -0.81
SCARNA20.5-201ENST00000516991 IGKV2-40A0A087WW87 121 aaPredicted RBP10.01□□□□□ -0.81
SCARNA20.5-201ENST00000516991 IGKV2D-40P01614 121 aaPredicted RBP10.01□□□□□ -0.81
SCARNA20.5-201ENST00000516991 H2AFB2P0C5Z0 115 aa10.01□□□□□ -0.81
SCARNA20.5-201ENST00000516991 ERVFC1-1P60608 527 aa10.01□□□□□ -0.81
SCARNA20.5-201ENST00000516991 CDPF1Q6NVV7 123 aa10.01□□□□□ -0.81
SCARNA20.5-201ENST00000516991 NFE4Q86UQ8 179 aa10.01□□□□□ -0.81
SCARNA20.5-201ENST00000516991 SLC25A2Q9BXI2 301 aa10.01□□□□□ -0.81
SCARNA20.5-201ENST00000516991 PGPEP1Q9NXJ5 209 aa10.01□□□□□ -0.81
SCARNA20.5-201ENST00000516991 NBEAP1P0C6P0 100 aa10□□□□□ -0.81
SCARNA20.5-201ENST00000516991 MRPL23Q16540 153 aaKnown RBP10□□□□□ -0.81
SCARNA20.5-201ENST00000516991 GCSAMLQ5JQS6 135 aa10□□□□□ -0.81
SCARNA20.5-201ENST00000516991 FAM122CQ6P4D5 195 aa10□□□□□ -0.81
SCARNA20.5-201ENST00000516991 CCDC32Q9BV29 185 aa10□□□□□ -0.81
SCARNA20.5-201ENST00000516991 MRPL32Q9BYC8 188 aaKnown RBP10□□□□□ -0.81
SCARNA20.5-201ENST00000516991 MRPL16Q9NX20 251 aaKnown RBP10□□□□□ -0.81
SCARNA20.5-201ENST00000516991 ZNF492Q9P255 531 aa10□□□□□ -0.81
SCARNA20.5-201ENST00000516991 IGHV3-53P01767 116 aa9.99□□□□□ -0.81
SCARNA20.5-201ENST00000516991 ZNF138P52744 262 aa9.99□□□□□ -0.81
SCARNA20.5-201ENST00000516991 CRYBA4P53673 196 aa9.99□□□□□ -0.81
SCARNA20.5-201ENST00000516991 PRR9Q5T870 116 aa9.99□□□□□ -0.81
SCARNA20.5-201ENST00000516991 FAM167A-AS1Q96KT0 104 aa9.99□□□□□ -0.81
SCARNA20.5-201ENST00000516991 SLC25A31Q9H0C2 315 aa9.99□□□□□ -0.81
SCARNA20.5-201ENST00000516991 OR51M1Q9H341 326 aa9.99□□□□□ -0.81
SCARNA20.5-201ENST00000516991 DNAH5Q8TE73 4624 aa9.99□□□□□ -0.81
SCARNA20.5-201ENST00000516991 TRAV9-2A0A087WT02 112 aa9.98□□□□□ -0.81
SCARNA20.5-201ENST00000516991 FAM240BA0A1B0GVZ2 78 aa9.98□□□□□ -0.81
SCARNA20.5-201ENST00000516991 K7EP13 123 aa9.98□□□□□ -0.81
SCARNA20.5-201ENST00000516991 CSN1S1P47710 185 aa9.98□□□□□ -0.81
SCARNA20.5-201ENST00000516991 MIR17HGQ75NE6 70 aa9.98□□□□□ -0.81
SCARNA20.5-201ENST00000516991 NEGR1Q7Z3B1 354 aa9.98□□□□□ -0.81
SCARNA20.5-201ENST00000516991 OR5C1Q8NGR4 320 aa9.98□□□□□ -0.81
SCARNA20.5-201ENST00000516991 THAP6Q8TBB0 222 aa9.98□□□□□ -0.81
SCARNA20.5-201ENST00000516991 PAXXQ9BUH6 204 aa9.98□□□□□ -0.81
SCARNA20.5-201ENST00000516991 TP53TG3Q9ULZ0 132 aa9.98□□□□□ -0.81
SCARNA20.5-201ENST00000516991 HHLA3Q9XRX5 114 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms