RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 DIAPH2-AS1Q14236 149 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 GLIPR1L1Q6UWM5 242 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 TOMM20LQ6UXN7 152 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 LINC00299Q6ZSB3 139 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 OR5H6Q8NGV6 325 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 THEM6Q8WUY1 208 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 PRELID3AQ96N28 172 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 EFCAB11Q9BUY7 163 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 DDA1Q9BW61 102 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 WFDC10AQ9H1F0 79 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 TAF9BQ9HBM6 251 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 N4BP2Q86UW6 1770 aaPredicted RBP0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 ABCA1O95477 2261 aa0.34□□□□□ -2.36
TRAPPC11-210ENST00000513600 NUP210Q8TEM1 1887 aaPredicted RBP0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 ERBINQ96RT1 1412 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 TRAV23DV6A0A075B6W5 121 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 TRBV7-6A0A0J9YX20 115 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 TRBV27A0A0K0K1C4 114 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 A6NN06 94 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 PGRMC1O00264 195 aaKnown RBP0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 IFNA21P01568 189 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 SAA1P0DJI8 122 aaPredicted RBP0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 TPT1P13693 172 aaKnown RBP0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 SDC2P34741 201 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 SRP9P49458 86 aaKnown RBP0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 POLR2HP52434 150 aaKnown RBP0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 VMA21Q3ZAQ7 101 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 ZCCHC23Q6ZST2 131 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 OR9Q1Q8NGQ5 310 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 OR5AK2Q8NH90 309 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 GRPEL2Q8TAA5 225 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 RMND5BQ96G75 393 aaPredicted RBP0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 LXNQ9BS40 222 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 MED31Q9Y3C7 131 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 BDP1A6H8Y1 2624 aa0.33□□□□□ -2.36
TRAPPC11-210ENST00000513600 APCP25054 2843 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 BCL9O00512 1426 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 TRAV13-1A0A0B4J241 112 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 C5orf58C9J3I9 102 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 H3BMG7 143 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 K7EIL1 84 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 IGHV3-30P01768 117 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 CD14P08571 375 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 IGHV3-30-5P0DP03 117 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 PDE6GP18545 87 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 FOXA3P55318 350 aaPredicted RBP0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 FXYD4P59646 89 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 MAXP61244 160 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 CCSMST1Q4G0I0 132 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 OCIAD2Q56VL3 154 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 TMEM128Q5BJH2 165 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 HRCT1Q6UXD1 115 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 CASC2Q6XLA1 102 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 LINC00305Q7Z4B0 112 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 ATOH7Q8N100 152 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 CIB3Q96Q77 187 aaPredicted RBP0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 SELENOSQ9BQE4 189 aa0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 BOKQ9UMX3 212 aaPredicted RBP0.32□□□□□ -2.36
TRAPPC11-210ENST00000513600 NAV2Q8IVL1 2488 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 PHRF1Q9P1Y6 1649 aaKnown RBP0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 CACNA1HO95180 2353 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 ANKRD17O75179 2603 aaKnown RBP0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 C3orf85A0A1B0GTC6 90 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 PRORSD1PA6NEY8 169 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 ZNF727A8MUV8 499 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 SAMD13Q5VXD3 122 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 IZUMO2Q6UXV1 221 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 SMIM15Q7Z3B0 74 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 C10orf111Q8N326 155 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 TMEM229BQ8NBD8 167 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 MORN4Q8NDC4 146 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 SKA2Q8WVK7 121 aaPredicted RBP0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 CLEC2BQ92478 149 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 NABP2Q9BQ15 211 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 C10orf95Q9H7T3 257 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 NIT2Q9NQR4 276 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 C19orf12Q9NSK7 152 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 MPC1Q9Y5U8 109 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 MED13LQ71F56 2210 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 ESPL1Q14674 2120 aa0.31□□□□□ -2.36
TRAPPC11-210ENST00000513600 PTPRDP23468 1912 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 A2MP01023 1474 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 TCOF1Q13428 1488 aaKnown RBP0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 FRAS1Q86XX4 4008 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 F8P00451 2351 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 TRBV30A0A0K0K1B3 111 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 LOC107984640A0A0U1RRK4 108 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 LOC107986453A0A1B0GWG9 222 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 ARL5CA6NH57 179 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 SULT1C4O75897 302 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 PRH1P02810 166 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 GYPBP06028 91 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 CCL4P13236 92 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 RPL7P18124 248 aaKnown RBP0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 RPS3P23396 243 aaKnown RBP eCLIP0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 RPL22P35268 128 aaKnown RBP0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 DNAJB13P59910 316 aa0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 RPL37AP61513 92 aaKnown RBP0.3□□□□□ -2.36
TRAPPC11-210ENST00000513600 B2MP61769 119 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms