RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 FAM104BQ5XKR9 115 aa11.55□□□□□ -0.56
UBXN11-216ENST00000496466 FA2HQ7L5A8 372 aa11.55□□□□□ -0.56
UBXN11-216ENST00000496466 OR4C5Q8NGB2 326 aa11.55□□□□□ -0.56
UBXN11-216ENST00000496466 PRSS3P2Q8NHM4 247 aa11.55□□□□□ -0.56
UBXN11-216ENST00000496466 ST20Q9HBF5 79 aa11.55□□□□□ -0.56
UBXN11-216ENST00000496466 ABCA2Q9BZC7 2435 aa11.55□□□□□ -0.56
UBXN11-216ENST00000496466 FLNCQ14315 2725 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 MUC21A0A0G2JKD1 596 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 MUC21A0A140T8X8 626 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 D6R8Y8 96 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 G3V318 75 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 HINT1P49773 126 aaPredicted RBP11.54□□□□□ -0.56
UBXN11-216ENST00000496466 MUC21Q5SSG8 566 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 AMN1Q8IY45 258 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 SPOCK3Q9BQ16 436 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 PIMREGQ9BSJ6 248 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 MCRIP2Q9BUT9 160 aaKnown RBP11.54□□□□□ -0.56
UBXN11-216ENST00000496466 TIMM8BQ9Y5J9 83 aaPredicted RBP11.54□□□□□ -0.56
UBXN11-216ENST00000496466 A0A087X0K7 114 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 BUB3O43684 328 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 BMI1P35226 326 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 PAX8Q06710 450 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 ZNF575Q86XF7 245 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 CCDC140Q96MF4 163 aa11.54□□□□□ -0.56
UBXN11-216ENST00000496466 GOSR1O95249 250 aa11.53□□□□□ -0.56
UBXN11-216ENST00000496466 IFI27P40305 119 aaPredicted RBP11.53□□□□□ -0.56
UBXN11-216ENST00000496466 C10orf105Q8TEF2 133 aa11.53□□□□□ -0.56
UBXN11-216ENST00000496466 CLPSL1A2RUU4 121 aa11.53□□□□□ -0.56
UBXN11-216ENST00000496466 PRAC2D3DTV9 90 aa11.53□□□□□ -0.56
UBXN11-216ENST00000496466 ERCC8Q13216 396 aa11.53□□□□□ -0.56
UBXN11-216ENST00000496466 RNF151Q2KHN1 245 aa11.53□□□□□ -0.56
UBXN11-216ENST00000496466 FAM106AQ4KMX7 169 aa11.53□□□□□ -0.56
UBXN11-216ENST00000496466 CLEC19AQ6UXS0 136 aa11.53□□□□□ -0.56
UBXN11-216ENST00000496466 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.53□□□□□ -0.56
UBXN11-216ENST00000496466 FER1L6-AS1Q8NA97 138 aa11.53□□□□□ -0.56
UBXN11-216ENST00000496466 PRELID3AQ96N28 172 aa11.53□□□□□ -0.56
UBXN11-216ENST00000496466 ZNF747Q9BV97 191 aa11.53□□□□□ -0.56
UBXN11-216ENST00000496466 USP9XQ93008 2570 aaPredicted RBP11.53□□□□□ -0.56
UBXN11-216ENST00000496466 CACNA1BQ00975 2339 aa11.52□□□□□ -0.56
UBXN11-216ENST00000496466 DOPEY1Q5JWR5 2465 aa11.52□□□□□ -0.56
UBXN11-216ENST00000496466 H0Y8G0 127 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 IGLC6P0CF74 106 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 RAB9AP51151 201 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 MRPL51Q4U2R6 128 aaKnown RBP11.52□□□□□ -0.57
UBXN11-216ENST00000496466 BRD3OSQ6XYD6 125 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 Q6ZVH6 145 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 OR10AG1Q8NH19 301 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 SIGLEC8Q9NYZ4 499 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 VPS13CQ709C8 3753 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 IGHV3-66A0A0C4DH42 116 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 LOC389332A0A1B0GUA5 103 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 ATP5J2P56134 94 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 SRSF2Q01130 221 aaKnown RBP11.52□□□□□ -0.57
UBXN11-216ENST00000496466 LOXL1Q08397 574 aaPredicted RBP11.52□□□□□ -0.57
UBXN11-216ENST00000496466 LINC01545Q5VT33 79 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 TMEM219Q86XT9 240 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 ORMDL3Q8N138 153 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 PSMG3-AS1Q96PY0 264 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 TP73-AS1Q9UF72 201 aa11.52□□□□□ -0.57
UBXN11-216ENST00000496466 IGHV4-30-2A0A087WSY4 118 aa11.51□□□□□ -0.57
UBXN11-216ENST00000496466 TWIST1Q15672 202 aa11.51□□□□□ -0.57
UBXN11-216ENST00000496466 RNF182Q8N6D2 247 aa11.51□□□□□ -0.57
UBXN11-216ENST00000496466 C5orf56Q8N8D9 126 aa11.51□□□□□ -0.57
UBXN11-216ENST00000496466 EEF1AKMT3Q96AZ1 226 aa11.51□□□□□ -0.57
UBXN11-216ENST00000496466 A0A096LNJ9 63 aa11.51□□□□□ -0.57
UBXN11-216ENST00000496466 HSBP1L1C9JCN9 74 aa11.51□□□□□ -0.57
UBXN11-216ENST00000496466 PRB1P04280 392 aa11.51□□□□□ -0.57
UBXN11-216ENST00000496466 PMCHL2Q9BQD1 86 aa11.51□□□□□ -0.57
UBXN11-216ENST00000496466 SPG11Q96JI7 2443 aa11.5□□□□□ -0.57
UBXN11-216ENST00000496466 TRAV40A0A0B4J280 105 aa11.5□□□□□ -0.57
UBXN11-216ENST00000496466 IGHV1-69DA0A0B4J2H0 117 aa11.5□□□□□ -0.57
UBXN11-216ENST00000496466 FABP5P3A8MUU1 101 aa11.5□□□□□ -0.57
UBXN11-216ENST00000496466 IGHV1-69P01742 117 aa11.5□□□□□ -0.57
UBXN11-216ENST00000496466 ORM1P02763 201 aa11.5□□□□□ -0.57
UBXN11-216ENST00000496466 IGHV3OR16-13A0A075B7E8 117 aa11.49□□□□□ -0.57
UBXN11-216ENST00000496466 IGHV3-74A0A0B4J1X5 117 aa11.49□□□□□ -0.57
UBXN11-216ENST00000496466 NCR2O95944 276 aa11.49□□□□□ -0.57
UBXN11-216ENST00000496466 CLEC2AQ6UVW9 174 aa11.49□□□□□ -0.57
UBXN11-216ENST00000496466 NRGNQ92686 78 aa11.49□□□□□ -0.57
UBXN11-216ENST00000496466 SLC50A1Q9BRV3 221 aa11.49□□□□□ -0.57
UBXN11-216ENST00000496466 SCRT2Q9NQ03 307 aa11.49□□□□□ -0.57
UBXN11-216ENST00000496466 TRBV7-1A0A0A6YYK4 115 aa11.49□□□□□ -0.57
UBXN11-216ENST00000496466 RBAKDNA6NC62 111 aa11.49□□□□□ -0.57
UBXN11-216ENST00000496466 SMKR1H3BMG3 65 aa11.48□□□□□ -0.57
UBXN11-216ENST00000496466 OCIAD2Q56VL3 154 aa11.48□□□□□ -0.57
UBXN11-216ENST00000496466 SLC25A34Q6PIV7 304 aa11.48□□□□□ -0.57
UBXN11-216ENST00000496466 PIFOQ8TCI5 191 aa11.48□□□□□ -0.57
UBXN11-216ENST00000496466 VPS25Q9BRG1 176 aa11.48□□□□□ -0.57
UBXN11-216ENST00000496466 MS4A6AQ9H2W1 248 aa11.48□□□□□ -0.57
UBXN11-216ENST00000496466 CST9LQ9H4G1 147 aa11.48□□□□□ -0.57
UBXN11-216ENST00000496466 CHTOPQ9Y3Y2 248 aaKnown RBP11.48□□□□□ -0.57
UBXN11-216ENST00000496466 NDUFS8O00217 210 aa11.48□□□□□ -0.57
UBXN11-216ENST00000496466 ZNF207O43670 478 aaKnown RBP11.48□□□□□ -0.57
UBXN11-216ENST00000496466 IGHV4-38-2P0DP08 117 aa11.48□□□□□ -0.57
UBXN11-216ENST00000496466 CKS2P33552 79 aa11.48□□□□□ -0.57
UBXN11-216ENST00000496466 IL17RELQ6ZVW7 336 aa11.48□□□□□ -0.57
UBXN11-216ENST00000496466 CSTL1Q9H114 145 aa11.48□□□□□ -0.57
UBXN11-216ENST00000496466 MSRB1Q9NZV6 116 aa11.48□□□□□ -0.57
UBXN11-216ENST00000496466 IGHV3-49A0A0A0MS15 119 aa11.47□□□□□ -0.57
UBXN11-216ENST00000496466 TRAV8-2A0A0B4J237 113 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms