RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 TMED6Q8WW62 240 aa5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 LINC01587Q99440 93 aa5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 NDFIP1Q9BT67 221 aa5.94□□□□□ -1.46
TM4SF1-204ENST00000493348 TRAV12-2A0A075B6T6 113 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 IGKV2-40A0A087WW87 121 aaPredicted RBP5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 SERTM2A0A1B0GWG4 89 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 A0A1W2PRE2 83 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 RBAKDNA6NC62 111 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 PRAC2D3DTV9 90 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 NPIPB6E9PJ23 425 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 F6UZH7 168 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 IGKV2D-40P01614 121 aaPredicted RBP5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 PRB4P10163 310 aaPredicted RBP5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 HTN1P15515 57 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 FGF8P55075 233 aaPredicted RBP5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 UBE2G2P60604 165 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 SUMO1P63165 101 aaKnown RBP5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 ERCC8Q13216 396 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 RRN3P1Q2M238 152 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 CCDC28AQ8IWP9 274 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 ARL6IP6Q8N6S5 226 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 C5orf17Q8NAS9 161 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 ZNF503Q96F45 646 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 ODF3Q96PU9 254 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 C20orf144Q9BQM9 153 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 STAB2Q8WWQ8 2551 aa5.93□□□□□ -1.46
TM4SF1-204ENST00000493348 TENM3Q9P273 2699 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 TEX48A0A1B0GUV7 120 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 A0A1B0GV50 99 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 CXorf65A6NEN9 183 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 A8MTW9 85 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 ZNF705EA8MWA4 302 aaPredicted RBP5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 DIRC3C9JPN6 131 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 C3orf84H3BNL1 204 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 H7BYZ3 331 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 IFNA1P01562 189 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 ZNF138P52744 262 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 EMP1P54849 157 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 CST9LP1Q5W188 147 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 C9orf47Q6ZRZ4 202 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 GOLT1AQ6ZVE7 132 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 C9orf62Q8N4C0 152 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 C11orf45Q8TAV5 145 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 MUC7Q8TAX7 377 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 NEU1Q99519 415 aa5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 C11orf68Q9H3H3 251 aaKnown RBP5.92□□□□□ -1.46
TM4SF1-204ENST00000493348 IGHV4-28A0A0C4DH34 117 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 LOC102723971A0A1B0GUV8 181 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 C7orf71A4D174 169 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 FBLL1A6NHQ2 334 aaKnown RBP5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 RGS13O14921 159 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 DEFB4AO15263 64 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 GIG44P09565 113 aaPredicted RBP5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 CT45A10P0DMU9 189 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 RNASE4P34096 147 aaKnown RBP5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 UBE2G1P62253 170 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 PMS2P11Q13670 270 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 AMTNQ6UX39 209 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 SSX7Q7RTT5 188 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 CSNK1G2-AS1Q8NCQ2 148 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 VGLL1Q99990 258 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 AGPAT4-IT1Q9H0P7 198 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 TMPRSS5Q9H3S3 457 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 PGPEP1Q9NXJ5 209 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 ZNF492Q9P255 531 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 LENEPQ9Y5L5 61 aa5.91□□□□□ -1.46
TM4SF1-204ENST00000493348 TRAV12-3A0A0B4J271 114 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 TRBV7-9A0A0J9YWB2 115 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 SNURFLB1AK76 121 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 TCRAP04437 139 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 NMBP08949 121 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 SPART-AS1P0CW21 52 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 FHITP49789 147 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 SULT1A2P50226 295 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 NKX2-5P52952 324 aaPredicted RBP5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 TAS2R60P59551 318 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 GNG5P63218 68 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 BLOC1S1P78537 153 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 CD300CQ08708 224 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 ZNF726P1Q15940 193 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 GFI1BQ5VTD9 330 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 ZNF705AQ6ZN79 300 aaPredicted RBP5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 CYB561D1Q8N8Q1 229 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 SUN5Q8TC36 379 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 MBD3L1Q8WWY6 194 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 HIST1H2BAQ96A08 127 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 C16orf74Q96GX8 76 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 TCEAL7Q9BRU2 100 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 ATG101Q9BSB4 218 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 EDA2RQ9HAV5 297 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 MANBALQ9NQG1 85 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 EPDR1Q9UM22 224 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 ARL2-SNX15V9GYD0 113 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 X6R8D5 127 aa5.9□□□□□ -1.46
TM4SF1-204ENST00000493348 NUPR2A6NF83 97 aa5.89□□□□□ -1.47
TM4SF1-204ENST00000493348 CBY3A6NI87 242 aa5.89□□□□□ -1.47
TM4SF1-204ENST00000493348 FAM74A7A6NL05 159 aa5.89□□□□□ -1.47
TM4SF1-204ENST00000493348 ZNF705GA8MUZ8 300 aaPredicted RBP5.89□□□□□ -1.47
TM4SF1-204ENST00000493348 PEX7O00628 323 aa5.89□□□□□ -1.47
TM4SF1-204ENST00000493348 PAGE4O60829 102 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms