RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 THAP8Q8NA92 274 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 IGHV7-4-1A0A0J9YVY3 117 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 GAGE12BA1L429 117 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 GAGE7O76087 117 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 IGKV1-39P01597 117 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 IGKV1D-39P04432 117 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 GAGE12FP0CL80 117 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 GAGE12GP0CL81 117 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 GAGE12IP0CL82 117 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 C8orf31Q8N9H6 132 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 ZNF503-AS2A6NEH8 195 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 OCIAD2Q56VL3 154 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 TCF20Q9UGU0 1960 aaKnown RBP12.99□□□□□ -0.33
BRAT1-206ENST00000493232 IGHV3-16A0A0C4DH30 117 aa12.99□□□□□ -0.33
BRAT1-206ENST00000493232 DLEU1O43261 78 aa12.98□□□□□ -0.33
BRAT1-206ENST00000493232 POLEQ07864 2286 aa12.98□□□□□ -0.33
BRAT1-206ENST00000493232 PI4KAP42356 2102 aa12.98□□□□□ -0.33
BRAT1-206ENST00000493232 NKAPP1Q8N9T2 125 aa12.98□□□□□ -0.33
BRAT1-206ENST00000493232 POU2AF1Q16633 256 aa12.98□□□□□ -0.33
BRAT1-206ENST00000493232 ZNF114Q8NC26 417 aa12.98□□□□□ -0.33
BRAT1-206ENST00000493232 ZNRF2Q8NHG8 242 aa12.98□□□□□ -0.33
BRAT1-206ENST00000493232 ARTNQ5T4W7 220 aa12.98□□□□□ -0.33
BRAT1-206ENST00000493232 COL4A6Q14031 1691 aa12.97□□□□□ -0.33
BRAT1-206ENST00000493232 K7EM74 188 aa12.97□□□□□ -0.33
BRAT1-206ENST00000493232 MRPL51Q4U2R6 128 aaKnown RBP12.97□□□□□ -0.33
BRAT1-206ENST00000493232 SNHG12Q9BXW3 62 aa12.97□□□□□ -0.33
BRAT1-206ENST00000493232 CACNA1BQ00975 2339 aa12.97□□□□□ -0.33
BRAT1-206ENST00000493232 STPG4Q8N801 248 aa12.97□□□□□ -0.33
BRAT1-206ENST00000493232 ATP6V0BQ99437 205 aa12.97□□□□□ -0.33
BRAT1-206ENST00000493232 IGLC1P0CG04 106 aa12.97□□□□□ -0.33
BRAT1-206ENST00000493232 H3BMM0 161 aa12.96□□□□□ -0.33
BRAT1-206ENST00000493232 ZNF625Q96I27 306 aaPredicted RBP12.96□□□□□ -0.33
BRAT1-206ENST00000493232 TPSG1Q9NRR2 321 aa12.96□□□□□ -0.33
BRAT1-206ENST00000493232 ABCA4P78363 2273 aa12.96□□□□□ -0.33
BRAT1-206ENST00000493232 A8MWP6 167 aa12.96□□□□□ -0.33
BRAT1-206ENST00000493232 C9JAW5 83 aa12.96□□□□□ -0.33
BRAT1-206ENST00000493232 GAGE2AQ6NT46 116 aa12.96□□□□□ -0.33
BRAT1-206ENST00000493232 INAFM2P0DMQ5 153 aa12.96□□□□□ -0.33
BRAT1-206ENST00000493232 SLAQ13239 276 aa12.96□□□□□ -0.33
BRAT1-206ENST00000493232 CYYR1Q96J86 154 aa12.96□□□□□ -0.33
BRAT1-206ENST00000493232 ROS1P08922 2347 aa12.96□□□□□ -0.34
BRAT1-206ENST00000493232 ZNF48Q96MX3 618 aaPredicted RBP12.95□□□□□ -0.34
BRAT1-206ENST00000493232 UBE2V1Q13404 147 aa12.95□□□□□ -0.34
BRAT1-206ENST00000493232 ZNF134P52741 427 aa12.95□□□□□ -0.34
BRAT1-206ENST00000493232 SMIM27A0A1W2PRY6 76 aa12.95□□□□□ -0.34
BRAT1-206ENST00000493232 RPL32P62910 135 aaKnown RBP12.95□□□□□ -0.34
BRAT1-206ENST00000493232 VWC2Q2TAL6 325 aa12.95□□□□□ -0.34
BRAT1-206ENST00000493232 EREGO14944 169 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 ZNF664Q8N3J9 261 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 V9GYV3 84 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 TRAV12-2A0A075B6T6 113 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 IGLV3-1P01715 115 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 HLA-DRB4P13762 266 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 RSPO1Q2MKA7 263 aaPredicted RBP12.94□□□□□ -0.34
BRAT1-206ENST00000493232 C20orf144Q9BQM9 153 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 TMEM126AQ9H061 195 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 HLA-DRB4X5D2U9 266 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 SOCS3O14543 225 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 IGHV2-5P01817 119 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 DIDO1Q9BTC0 2240 aaKnown RBP12.94□□□□□ -0.34
BRAT1-206ENST00000493232 MMP23AO75900 390 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 GAGE6Q13070 117 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 ZNF726P1Q15940 193 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 OR11H6Q8NGC7 330 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 PYGO2Q9BRQ0 406 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 TP53BP1Q12888 1972 aaPredicted RBP12.94□□□□□ -0.34
BRAT1-206ENST00000493232 TRBV20-1A0A075B6N2 111 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 C11orf52Q96A22 123 aa12.94□□□□□ -0.34
BRAT1-206ENST00000493232 FER1L5A0AVI2 2057 aa12.93□□□□□ -0.34
BRAT1-206ENST00000493232 PRSS57Q6UWY2 283 aa12.93□□□□□ -0.34
BRAT1-206ENST00000493232 FOXI2Q6ZQN5 318 aa12.93□□□□□ -0.34
BRAT1-206ENST00000493232 SMIM2Q9BVW6 85 aa12.93□□□□□ -0.34
BRAT1-206ENST00000493232 VPREB3Q9UKI3 123 aa12.93□□□□□ -0.34
BRAT1-206ENST00000493232 KIAA2026Q5HYC2 2103 aa12.93□□□□□ -0.34
BRAT1-206ENST00000493232 C9JQL5 133 aa12.93□□□□□ -0.34
BRAT1-206ENST00000493232 WISP1O95388 367 aa12.93□□□□□ -0.34
BRAT1-206ENST00000493232 PFN2P35080 140 aa12.93□□□□□ -0.34
BRAT1-206ENST00000493232 VOPP1Q96AW1 172 aa12.93□□□□□ -0.34
BRAT1-206ENST00000493232 C20orf78Q9BR46 151 aa12.93□□□□□ -0.34
BRAT1-206ENST00000493232 ABCA1O95477 2261 aa12.92□□□□□ -0.34
BRAT1-206ENST00000493232 IGHV2-70P01814 119 aa12.92□□□□□ -0.34
BRAT1-206ENST00000493232 FXYD5Q96DB9 178 aa12.92□□□□□ -0.34
BRAT1-206ENST00000493232 LGALS9BQ3B8N2 356 aa12.92□□□□□ -0.34
BRAT1-206ENST00000493232 LGALS9CQ6DKI2 356 aa12.92□□□□□ -0.34
BRAT1-206ENST00000493232 MRPL53Q96EL3 112 aaKnown RBP12.92□□□□□ -0.34
BRAT1-206ENST00000493232 SLX1AQ9BQ83 275 aa12.92□□□□□ -0.34
BRAT1-206ENST00000493232 PHF3Q92576 2039 aaKnown RBP12.92□□□□□ -0.34
BRAT1-206ENST00000493232 FAM120AOSQ5T036 256 aa12.92□□□□□ -0.34
BRAT1-206ENST00000493232 HOXB4P17483 251 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-206ENST00000493232 TSSC4Q9Y5U2 329 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-206ENST00000493232 HERVK_113P63121 156 aa12.91□□□□□ -0.34
BRAT1-206ENST00000493232 NDUFA12Q9UI09 145 aa12.91□□□□□ -0.34
BRAT1-206ENST00000493232 SHISA9B4DS77 424 aa12.91□□□□□ -0.34
BRAT1-206ENST00000493232 PRSS33Q8NF86 280 aa12.91□□□□□ -0.34
BRAT1-206ENST00000493232 GPR179Q6PRD1 2367 aa12.91□□□□□ -0.34
BRAT1-206ENST00000493232 TICRRQ7Z2Z1 1910 aa12.91□□□□□ -0.34
BRAT1-206ENST00000493232 ZC2HC1AQ96GY0 325 aa12.91□□□□□ -0.34
BRAT1-206ENST00000493232 C22orf46C9J442 243 aa12.9□□□□□ -0.34
BRAT1-206ENST00000493232 DIAPH2-AS1Q14236 149 aa12.9□□□□□ -0.34
BRAT1-206ENST00000493232 RBMY1FQ15415 496 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms