RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 GFI1BQ5VTD9 330 aa9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 Q6AWC8 147 aa9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 RBPMS2Q6ZRY4 209 aaKnown RBP9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 MS4A10Q96PG2 267 aa9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 JMJD8Q96S16 334 aa9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 GNB4Q9HAV0 340 aa9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 NIT2Q9NQR4 276 aa9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 COL7A1Q02388 2944 aa9.18□□□□□ -0.94
SRGAP3-210ENST00000491467 A0A1W2PS18 150 aa9.18□□□□□ -0.94
SRGAP3-210ENST00000491467 HIGD1CA8MV81 97 aa9.18□□□□□ -0.94
SRGAP3-210ENST00000491467 AVPP01185 164 aa9.18□□□□□ -0.94
SRGAP3-210ENST00000491467 APCSP02743 223 aa9.18□□□□□ -0.94
SRGAP3-210ENST00000491467 AMBPP02760 352 aa9.18□□□□□ -0.94
SRGAP3-210ENST00000491467 ARL3P36405 182 aa9.18□□□□□ -0.94
SRGAP3-210ENST00000491467 TPPP2P59282 170 aa9.18□□□□□ -0.94
SRGAP3-210ENST00000491467 HILS1P60008 231 aa9.18□□□□□ -0.94
SRGAP3-210ENST00000491467 LY6EQ16553 131 aa9.18□□□□□ -0.94
SRGAP3-210ENST00000491467 BCL6BQ8N143 479 aaPredicted RBP9.18□□□□□ -0.94
SRGAP3-210ENST00000491467 NEU1Q99519 415 aa9.18□□□□□ -0.94
SRGAP3-210ENST00000491467 SMAD5-AS1Q9Y6J3 95 aa9.18□□□□□ -0.94
SRGAP3-210ENST00000491467 A0A1B0GXF2 115 aa9.17□□□□□ -0.94
SRGAP3-210ENST00000491467 CLPSL1A2RUU4 121 aa9.17□□□□□ -0.94
SRGAP3-210ENST00000491467 FSHBP01225 129 aa9.17□□□□□ -0.94
SRGAP3-210ENST00000491467 BMI1P35226 326 aa9.17□□□□□ -0.94
SRGAP3-210ENST00000491467 TCL1AP56279 114 aa9.17□□□□□ -0.94
SRGAP3-210ENST00000491467 RPS20P60866 119 aaKnown RBP9.17□□□□□ -0.94
SRGAP3-210ENST00000491467 HBBP68871 147 aa9.17□□□□□ -0.94
SRGAP3-210ENST00000491467 JOSD1Q15040 202 aaPredicted RBP9.17□□□□□ -0.94
SRGAP3-210ENST00000491467 DMRTA1Q5VZB9 504 aa9.17□□□□□ -0.94
SRGAP3-210ENST00000491467 NDFIP1Q9BT67 221 aa9.17□□□□□ -0.94
SRGAP3-210ENST00000491467 PRDM13Q9H4Q3 707 aa9.17□□□□□ -0.94
SRGAP3-210ENST00000491467 PPP1R14DQ9NXH3 145 aa9.17□□□□□ -0.94
SRGAP3-210ENST00000491467 SH2D7A6NKC9 451 aaPredicted RBP9.16□□□□□ -0.94
SRGAP3-210ENST00000491467 A8MWP6 167 aa9.16□□□□□ -0.94
SRGAP3-210ENST00000491467 PRB2P02812 416 aaPredicted RBP9.16□□□□□ -0.94
SRGAP3-210ENST00000491467 RAB4BP61018 213 aa9.16□□□□□ -0.94
SRGAP3-210ENST00000491467 CFHR3Q02985 330 aa9.16□□□□□ -0.94
SRGAP3-210ENST00000491467 SCGB2A2Q13296 93 aa9.16□□□□□ -0.94
SRGAP3-210ENST00000491467 DEFB112Q30KQ8 113 aa9.16□□□□□ -0.94
SRGAP3-210ENST00000491467 PDZD11Q5EBL8 140 aa9.16□□□□□ -0.94
SRGAP3-210ENST00000491467 PYY3Q5JQD4 70 aa9.16□□□□□ -0.94
SRGAP3-210ENST00000491467 LCN12Q6JVE5 192 aa9.16□□□□□ -0.94
SRGAP3-210ENST00000491467 MRPL54Q6P161 138 aaKnown RBP9.16□□□□□ -0.94
SRGAP3-210ENST00000491467 LINC00322Q6ZN03 302 aaPredicted RBP9.16□□□□□ -0.94
SRGAP3-210ENST00000491467 SGK494Q96LW2 274 aa9.16□□□□□ -0.94
SRGAP3-210ENST00000491467 TRAV8-1A0A0A6YYK1 113 aa9.15□□□□□ -0.94
SRGAP3-210ENST00000491467 K7EMT4 169 aa9.15□□□□□ -0.94
SRGAP3-210ENST00000491467 CHEK1O14757 476 aa9.15□□□□□ -0.94
SRGAP3-210ENST00000491467 RIGQ13278 110 aa9.15□□□□□ -0.94
SRGAP3-210ENST00000491467 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.15□□□□□ -0.94
SRGAP3-210ENST00000491467 Q6YL49 198 aa9.15□□□□□ -0.94
SRGAP3-210ENST00000491467 BAGE3Q86Y29 109 aa9.15□□□□□ -0.94
SRGAP3-210ENST00000491467 GATD1Q8NB37 220 aa9.15□□□□□ -0.94
SRGAP3-210ENST00000491467 OR2D3Q8NGH3 330 aa9.15□□□□□ -0.94
SRGAP3-210ENST00000491467 MRAPQ8TCY5 172 aa9.15□□□□□ -0.94
SRGAP3-210ENST00000491467 ZC2HC1AQ96GY0 325 aa9.15□□□□□ -0.94
SRGAP3-210ENST00000491467 WWC2-AS2Q96NR7 200 aa9.15□□□□□ -0.94
SRGAP3-210ENST00000491467 PRR25Q96S07 402 aa9.15□□□□□ -0.94
SRGAP3-210ENST00000491467 M0R3E3 92 aa9.14□□□□□ -0.95
SRGAP3-210ENST00000491467 SPINK4O60575 86 aa9.14□□□□□ -0.95
SRGAP3-210ENST00000491467 CA1P00915 261 aaPredicted RBP9.14□□□□□ -0.95
SRGAP3-210ENST00000491467 IGHG4P01861 327 aa9.14□□□□□ -0.95
SRGAP3-210ENST00000491467 PF4V1P10720 104 aa9.14□□□□□ -0.95
SRGAP3-210ENST00000491467 BLCAPP62952 87 aa9.14□□□□□ -0.95
SRGAP3-210ENST00000491467 KLF5Q13887 457 aaPredicted RBP9.14□□□□□ -0.95
SRGAP3-210ENST00000491467 SAMD13Q5VXD3 122 aa9.14□□□□□ -0.95
SRGAP3-210ENST00000491467 BORCS7Q96B45 105 aa9.14□□□□□ -0.95
SRGAP3-210ENST00000491467 LENEPQ9Y5L5 61 aa9.14□□□□□ -0.95
SRGAP3-210ENST00000491467 SLC35B1P78383 322 aa9.13□□□□□ -0.95
SRGAP3-210ENST00000491467 FAM106AQ4KMX7 169 aa9.13□□□□□ -0.95
SRGAP3-210ENST00000491467 TCF24Q7RTU0 167 aa9.13□□□□□ -0.95
SRGAP3-210ENST00000491467 OR4X2Q8NGF9 303 aa9.13□□□□□ -0.95
SRGAP3-210ENST00000491467 GLMPQ8WWB7 406 aa9.13□□□□□ -0.95
SRGAP3-210ENST00000491467 NOL4LQ96MY1 436 aaPredicted RBP9.13□□□□□ -0.95
SRGAP3-210ENST00000491467 ASCL2Q99929 193 aa9.13□□□□□ -0.95
SRGAP3-210ENST00000491467 NPFFR1Q9GZQ6 430 aa9.13□□□□□ -0.95
SRGAP3-210ENST00000491467 IGHV3-35A0A0C4DH35 117 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 A0A1B0GUT8 65 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 TMEM189A5PLL7 270 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 PCP4L1A6NKN8 68 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 FABP5P3A8MUU1 101 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 FOXE3Q13461 319 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 C9orf47Q6ZRZ4 202 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 GPHB5Q86YW7 130 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 TMEM256Q8N2U0 113 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 GTSF1Q8WW33 167 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 GSN-AS1Q9NRJ2 163 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 PEF1Q9UBV8 284 aaKnown RBP9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 LINC00527Q9UJ94 153 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 VPREB3Q9UKI3 123 aa9.12□□□□□ -0.95
SRGAP3-210ENST00000491467 HERC2O95714 4834 aa9.11□□□□□ -0.95
SRGAP3-210ENST00000491467 TENM2Q9NT68 2774 aa9.11□□□□□ -0.95
SRGAP3-210ENST00000491467 GRIFINA4D1Z8 144 aa9.11□□□□□ -0.95
SRGAP3-210ENST00000491467 SERF1AO75920 110 aa9.11□□□□□ -0.95
SRGAP3-210ENST00000491467 IGHV4-59P01825 116 aa9.11□□□□□ -0.95
SRGAP3-210ENST00000491467 ELANEP08246 267 aa9.11□□□□□ -0.95
SRGAP3-210ENST00000491467 FRMD6-AS1P0C7T7 363 aa9.11□□□□□ -0.95
SRGAP3-210ENST00000491467 PSMB8P28062 276 aa9.11□□□□□ -0.95
SRGAP3-210ENST00000491467 SRIP30626 198 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms