RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 ATPIF1Q9UII2 106 aa0.53□□□□□ -2.32
SEMA3A-207ENST00000490883 BOKQ9UMX3 212 aaPredicted RBP0.53□□□□□ -2.32
SEMA3A-207ENST00000490883 ANKRD31Q8N7Z5 1873 aa0.52□□□□□ -2.33
SEMA3A-207ENST00000490883 IGHV3-30P01768 117 aa0.52□□□□□ -2.33
SEMA3A-207ENST00000490883 IGHV3-30-5P0DP03 117 aa0.52□□□□□ -2.33
SEMA3A-207ENST00000490883 S100A11P31949 105 aa0.52□□□□□ -2.33
SEMA3A-207ENST00000490883 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
SEMA3A-207ENST00000490883 ANGPTL5Q86XS5 388 aa0.52□□□□□ -2.33
SEMA3A-207ENST00000490883 STX12Q86Y82 276 aa0.52□□□□□ -2.33
SEMA3A-207ENST00000490883 OR5H6Q8NGV6 325 aa0.52□□□□□ -2.33
SEMA3A-207ENST00000490883 RMND5BQ96G75 393 aaPredicted RBP0.52□□□□□ -2.33
SEMA3A-207ENST00000490883 SMPXQ9UHP9 88 aa0.52□□□□□ -2.33
SEMA3A-207ENST00000490883 ZCCHC11Q5TAX3 1644 aaKnown RBP0.52□□□□□ -2.33
SEMA3A-207ENST00000490883 TRACP01848 142 aa0.51□□□□□ -2.33
SEMA3A-207ENST00000490883 SDC2P34741 201 aa0.51□□□□□ -2.33
SEMA3A-207ENST00000490883 Q6ZQY7 126 aa0.51□□□□□ -2.33
SEMA3A-207ENST00000490883 GRPEL2Q8TAA5 225 aa0.51□□□□□ -2.33
SEMA3A-207ENST00000490883 PRELID3AQ96N28 172 aa0.51□□□□□ -2.33
SEMA3A-207ENST00000490883 NIT2Q9NQR4 276 aa0.51□□□□□ -2.33
SEMA3A-207ENST00000490883 USP24Q9UPU5 2620 aa0.51□□□□□ -2.33
SEMA3A-207ENST00000490883 TRBV27A0A0K0K1C4 114 aa0.5□□□□□ -2.33
SEMA3A-207ENST00000490883 NDUFA6P56556 154 aa0.5□□□□□ -2.33
SEMA3A-207ENST00000490883 C10orf111Q8N326 155 aa0.5□□□□□ -2.33
SEMA3A-207ENST00000490883 NUPR2A6NF83 97 aa0.49□□□□□ -2.33
SEMA3A-207ENST00000490883 PFDN1O60925 122 aa0.49□□□□□ -2.33
SEMA3A-207ENST00000490883 FABP1P07148 127 aa0.49□□□□□ -2.33
SEMA3A-207ENST00000490883 TPT1P13693 172 aaKnown RBP0.49□□□□□ -2.33
SEMA3A-207ENST00000490883 IZUMO2Q6UXV1 221 aa0.49□□□□□ -2.33
SEMA3A-207ENST00000490883 CASC2Q6XLA1 102 aa0.49□□□□□ -2.33
SEMA3A-207ENST00000490883 LINC00305Q7Z4B0 112 aa0.49□□□□□ -2.33
SEMA3A-207ENST00000490883 OR5AK2Q8NH90 309 aa0.49□□□□□ -2.33
SEMA3A-207ENST00000490883 THEM6Q8WUY1 208 aa0.49□□□□□ -2.33
SEMA3A-207ENST00000490883 PLAC4Q8WY50 150 aa0.49□□□□□ -2.33
SEMA3A-207ENST00000490883 CCL19Q99731 98 aa0.49□□□□□ -2.33
SEMA3A-207ENST00000490883 NABP2Q9BQ15 211 aa0.49□□□□□ -2.33
SEMA3A-207ENST00000490883 CENPHQ9H3R5 247 aa0.49□□□□□ -2.33
SEMA3A-207ENST00000490883 C3orf85A0A1B0GTC6 90 aa0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 C5orf58C9J3I9 102 aa0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 E7EQ34 232 aa0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 PRH1P02810 166 aa0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 SAA1P0DJI8 122 aaPredicted RBP0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 CCL4P13236 92 aa0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 MAXP61244 160 aa0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 RPL37AP61513 92 aaKnown RBP0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 NEDD8Q15843 81 aa0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 HRCT1Q6UXD1 115 aa0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 C5orf17Q8NAS9 161 aa0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 CLEC2BQ92478 149 aa0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 CIB3Q96Q77 187 aaPredicted RBP0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 MED31Q9Y3C7 131 aa0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
SEMA3A-207ENST00000490883 NAV3Q8IVL0 2385 aa0.47□□□□□ -2.33
SEMA3A-207ENST00000490883 TRAV13-1A0A0B4J241 112 aa0.47□□□□□ -2.33
SEMA3A-207ENST00000490883 TRBV7-6A0A0J9YX20 115 aa0.47□□□□□ -2.33
SEMA3A-207ENST00000490883 H3BMG7 143 aa0.47□□□□□ -2.33
SEMA3A-207ENST00000490883 FAM107AO95990 144 aa0.47□□□□□ -2.33
SEMA3A-207ENST00000490883 TMEM229BQ8NBD8 167 aa0.47□□□□□ -2.33
SEMA3A-207ENST00000490883 MORN4Q8NDC4 146 aa0.47□□□□□ -2.33
SEMA3A-207ENST00000490883 LXNQ9BS40 222 aa0.47□□□□□ -2.33
SEMA3A-207ENST00000490883 V9GYQ6 96 aa0.47□□□□□ -2.33
SEMA3A-207ENST00000490883 POLR2HP52434 150 aaKnown RBP0.46□□□□□ -2.34
SEMA3A-207ENST00000490883 ZNF137PP52743 207 aa0.46□□□□□ -2.34
SEMA3A-207ENST00000490883 Q6ZS92 163 aa0.46□□□□□ -2.34
SEMA3A-207ENST00000490883 Q86TA4 180 aa0.46□□□□□ -2.34
SEMA3A-207ENST00000490883 LPAR5Q9H1C0 372 aa0.46□□□□□ -2.34
SEMA3A-207ENST00000490883 FKBP11Q9NYL4 201 aa0.46□□□□□ -2.34
SEMA3A-207ENST00000490883 JPT1Q9UK76 154 aa0.46□□□□□ -2.34
SEMA3A-207ENST00000490883 MPC1Q9Y5U8 109 aa0.46□□□□□ -2.34
SEMA3A-207ENST00000490883 TCOF1Q13428 1488 aaKnown RBP0.46□□□□□ -2.34
SEMA3A-207ENST00000490883 MUC5BQ9HC84 5762 aaPredicted RBP0.46□□□□□ -2.34
SEMA3A-207ENST00000490883 CACNA1EQ15878 2313 aa0.46□□□□□ -2.34
SEMA3A-207ENST00000490883 KIAA1549LQ6ZVL6 1849 aa0.45□□□□□ -2.34
SEMA3A-207ENST00000490883 DLC1Q96QB1 1528 aa0.45□□□□□ -2.34
SEMA3A-207ENST00000490883 A0A1B0GV72 72 aa0.45□□□□□ -2.34
SEMA3A-207ENST00000490883 SULT1C4O75897 302 aa0.45□□□□□ -2.34
SEMA3A-207ENST00000490883 RPL7P18124 248 aaKnown RBP0.45□□□□□ -2.34
SEMA3A-207ENST00000490883 TFAMQ00059 246 aaKnown RBP0.45□□□□□ -2.34
SEMA3A-207ENST00000490883 CCSMST1Q4G0I0 132 aa0.45□□□□□ -2.34
SEMA3A-207ENST00000490883 TOMM20LQ6UXN7 152 aa0.45□□□□□ -2.34
SEMA3A-207ENST00000490883 TEX29Q8N6K0 151 aa0.45□□□□□ -2.34
SEMA3A-207ENST00000490883 SMR3AQ99954 134 aa0.45□□□□□ -2.34
SEMA3A-207ENST00000490883 CTTNBP2Q8WZ74 1663 aa0.45□□□□□ -2.34
SEMA3A-207ENST00000490883 ANK1P16157 1881 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 FER1L6Q2WGJ9 1857 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 IFNA21P01568 189 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 GYPBP06028 91 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 SLC25A4P12235 298 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 SPINT3P49223 89 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 SRP9P49458 86 aaKnown RBP0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 FXYD6P3P58550 94 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 DNAJB13P59910 316 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 CSAG1Q6PB30 78 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 C10orf99Q6UWK7 81 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 TCTEX1D1Q8N7M0 179 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 OR9Q1Q8NGQ5 310 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 C19orf12Q9NSK7 152 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 CBLN4Q9NTU7 201 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 FAM135BQ49AJ0 1406 aa0.44□□□□□ -2.34
SEMA3A-207ENST00000490883 USP54Q70EL1 1684 aa0.43□□□□□ -2.34
SEMA3A-207ENST00000490883 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms