RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SRD5A3Q9H8P0 318 aa7.13□□□□□ -1.27
SF3B1-211ENST00000487698 PHOX2AO14813 284 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 TCF21O43680 179 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 CRLF1O75462 422 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 CA1P00915 261 aaPredicted RBP7.12□□□□□ -1.27
SF3B1-211ENST00000487698 CRIP1P50238 77 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 ERCC8Q13216 396 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 SAPCD1Q5SSQ6 148 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 SAMD13Q5VXD3 122 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 C9orf47Q6ZRZ4 202 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 RAX2Q96IS3 184 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 DUX3Q96PT4 197 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 CITED2Q99967 270 aaPredicted RBP7.12□□□□□ -1.27
SF3B1-211ENST00000487698 GPR61Q9BZJ8 451 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 RPP21Q9H633 154 aaKnown RBP7.12□□□□□ -1.27
SF3B1-211ENST00000487698 P01737 135 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 RAB5BP61020 215 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 RPL11P62913 178 aaKnown RBP7.12□□□□□ -1.27
SF3B1-211ENST00000487698 C11orf44Q8N8P7 122 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 OR4B1Q8NGF8 309 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 TSKUQ8WUA8 353 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 DPF1Q92782 380 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 AGPAT4-IT1Q9H0P7 198 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 PPP1R14DQ9NXH3 145 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 RNF114Q9Y508 228 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 TSSC4Q9Y5U2 329 aaPredicted RBP7.12□□□□□ -1.27
SF3B1-211ENST00000487698 SELENOKQ9Y6D0 94 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 WNK1Q9H4A3 2382 aa7.12□□□□□ -1.27
SF3B1-211ENST00000487698 ZFP82Q8N141 532 aa7.11□□□□□ -1.27
SF3B1-211ENST00000487698 ZNF738Q8NE65 137 aa7.11□□□□□ -1.27
SF3B1-211ENST00000487698 OR9G4Q8NGQ1 327 aa7.11□□□□□ -1.27
SF3B1-211ENST00000487698 DLX4Q92988 240 aaPredicted RBP7.11□□□□□ -1.27
SF3B1-211ENST00000487698 MS4A6AQ9H2W1 248 aa7.11□□□□□ -1.27
SF3B1-211ENST00000487698 IGKV3-7A0A075B6H7 116 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 LOC105371267A0A1B0GV96 52 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 TRGC2P03986 189 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 CT45A10P0DMU9 189 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 TCL1AP56279 114 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 DAZAP1Q96EP5 407 aaKnown RBP7.1□□□□□ -1.27
SF3B1-211ENST00000487698 PEMTQ9UBM1 199 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 ADARB2-AS1A8MUL3 147 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 K7EQG2 157 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 M0QZ24 198 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 OVOL1O14753 267 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 ZNF80P51504 273 aaPredicted RBP7.1□□□□□ -1.27
SF3B1-211ENST00000487698 ZNF138P52744 262 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 TMEM78Q5T7P6 136 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 NEU1Q99519 415 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 NDFIP1Q9BT67 221 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 GFRA4Q9GZZ7 299 aa7.1□□□□□ -1.27
SF3B1-211ENST00000487698 A0A1W2PRX2 142 aa7.09□□□□□ -1.27
SF3B1-211ENST00000487698 FAM231BA6NCW3 169 aa7.09□□□□□ -1.27
SF3B1-211ENST00000487698 IZUMO1RA6ND01 250 aa7.09□□□□□ -1.27
SF3B1-211ENST00000487698 A8MWL6 223 aa7.09□□□□□ -1.27
SF3B1-211ENST00000487698 CCL24O00175 119 aa7.09□□□□□ -1.27
SF3B1-211ENST00000487698 CSN3P07498 182 aa7.09□□□□□ -1.27
SF3B1-211ENST00000487698 SRSF2Q01130 221 aaKnown RBP7.09□□□□□ -1.27
SF3B1-211ENST00000487698 ACTL10Q5JWF8 245 aa7.09□□□□□ -1.27
SF3B1-211ENST00000487698 FAM162BQ5T6X4 162 aa7.09□□□□□ -1.27
SF3B1-211ENST00000487698 GTSF1Q8WW33 167 aa7.09□□□□□ -1.27
SF3B1-211ENST00000487698 NAT8BQ9UHF3 227 aa7.09□□□□□ -1.27
SF3B1-211ENST00000487698 HIGD1CA8MV81 97 aa7.09□□□□□ -1.28
SF3B1-211ENST00000487698 SH2D1AO60880 128 aa7.09□□□□□ -1.28
SF3B1-211ENST00000487698 ID1P41134 155 aa7.09□□□□□ -1.28
SF3B1-211ENST00000487698 DEFB1P60022 68 aa7.09□□□□□ -1.28
SF3B1-211ENST00000487698 SMUG1Q53HV7 270 aa7.09□□□□□ -1.28
SF3B1-211ENST00000487698 NUP35Q8NFH5 326 aa7.09□□□□□ -1.28
SF3B1-211ENST00000487698 OR8A1Q8NGG7 326 aa7.09□□□□□ -1.28
SF3B1-211ENST00000487698 OR2D3Q8NGH3 330 aa7.09□□□□□ -1.28
SF3B1-211ENST00000487698 FRZBQ92765 325 aa7.09□□□□□ -1.28
SF3B1-211ENST00000487698 LENEPQ9Y5L5 61 aa7.09□□□□□ -1.28
SF3B1-211ENST00000487698 HIST1H2BKO60814 126 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 HIST1H2BJP06899 126 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 FRMD6-AS1P0C7T7 363 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 ZNF705DP0CH99 300 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-211ENST00000487698 ZNF705BP0CI00 300 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-211ENST00000487698 HIST1H2BOP23527 126 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 HIST1H2BBP33778 126 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 HIST1H2BDP58876 126 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 KRTAP10-3P60369 221 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 HIST1H2BCP62807 126 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 RPL19P84098 196 aaKnown RBP7.08□□□□□ -1.28
SF3B1-211ENST00000487698 HIST2H2BEQ16778 126 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-211ENST00000487698 OR10J6PQ8NGY7 276 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 HIST1H2BHQ93079 126 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 FAM19A4Q96LR4 140 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 LINC00477Q96M19 166 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 HIST1H2BNQ99877 126 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 HIST1H2BMQ99879 126 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 SORL1Q92673 2214 aa7.08□□□□□ -1.28
SF3B1-211ENST00000487698 F6UB75 175 aa7.07□□□□□ -1.28
SF3B1-211ENST00000487698 FOXA3P55318 350 aaPredicted RBP7.07□□□□□ -1.28
SF3B1-211ENST00000487698 TRAV2A0A0B4J234 112 aa7.07□□□□□ -1.28
SF3B1-211ENST00000487698 TRBV7-9A0A0J9YWB2 115 aa7.07□□□□□ -1.28
SF3B1-211ENST00000487698 A0A1B0GXF2 115 aa7.07□□□□□ -1.28
SF3B1-211ENST00000487698 TFPI2P48307 235 aa7.07□□□□□ -1.28
SF3B1-211ENST00000487698 RASL11AQ6T310 242 aa7.07□□□□□ -1.28
SF3B1-211ENST00000487698 RBPMS2Q6ZRY4 209 aaKnown RBP7.07□□□□□ -1.28
SF3B1-211ENST00000487698 WFDC3Q8IUB2 231 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms