RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 FHAD1B1AJZ9 1412 aa1.02□□□□□ -2.25
SMC4-218ENST00000486711 CD14P08571 375 aa1.02□□□□□ -2.25
SMC4-218ENST00000486711 SAA1P0DJI8 122 aaPredicted RBP1.02□□□□□ -2.25
SMC4-218ENST00000486711 SIP14410 1827 aa1.02□□□□□ -2.25
SMC4-218ENST00000486711 POLR2HP52434 150 aaKnown RBP1.02□□□□□ -2.25
SMC4-218ENST00000486711 NEDD8Q15843 81 aa1.02□□□□□ -2.25
SMC4-218ENST00000486711 TMEM128Q5BJH2 165 aa1.02□□□□□ -2.25
SMC4-218ENST00000486711 GLIPR1L1Q6UWM5 242 aa1.02□□□□□ -2.25
SMC4-218ENST00000486711 TEX29Q8N6K0 151 aa1.02□□□□□ -2.25
SMC4-218ENST00000486711 RB1CC1Q8TDY2 1594 aa1.02□□□□□ -2.25
SMC4-218ENST00000486711 CLEC2BQ92478 149 aa1.02□□□□□ -2.25
SMC4-218ENST00000486711 AP1S3Q96PC3 154 aa1.02□□□□□ -2.25
SMC4-218ENST00000486711 DDA1Q9BW61 102 aa1.02□□□□□ -2.25
SMC4-218ENST00000486711 CASP8AP2Q9UKL3 1982 aa1.02□□□□□ -2.25
SMC4-218ENST00000486711 TRAPPC2LQ9UL33 140 aa1.02□□□□□ -2.25
SMC4-218ENST00000486711 ABCC8Q09428 1581 aa1.01□□□□□ -2.25
SMC4-218ENST00000486711 CLIP1P30622 1438 aa1.01□□□□□ -2.25
SMC4-218ENST00000486711 SCAPERQ9BY12 1400 aa1.01□□□□□ -2.25
SMC4-218ENST00000486711 ROCK2O75116 1388 aaKnown RBP1.01□□□□□ -2.25
SMC4-218ENST00000486711 H3BMG7 143 aa1.01□□□□□ -2.25
SMC4-218ENST00000486711 OCIAD2Q56VL3 154 aa1.01□□□□□ -2.25
SMC4-218ENST00000486711 ZCCHC23Q6ZST2 131 aa1.01□□□□□ -2.25
SMC4-218ENST00000486711 SKA2Q8WVK7 121 aaPredicted RBP1.01□□□□□ -2.25
SMC4-218ENST00000486711 UNC13CQ8NB66 2214 aa1.01□□□□□ -2.25
SMC4-218ENST00000486711 EML5Q05BV3 1969 aa1.01□□□□□ -2.25
SMC4-218ENST00000486711 MYH3P11055 1940 aa1.01□□□□□ -2.25
SMC4-218ENST00000486711 LAMA4Q16363 1823 aa1.01□□□□□ -2.25
SMC4-218ENST00000486711 CCDC18Q5T9S5 1454 aa1□□□□□ -2.25
SMC4-218ENST00000486711 MYO18AQ92614 2054 aaKnown RBP1□□□□□ -2.25
SMC4-218ENST00000486711 TRBV7-6A0A0J9YX20 115 aa1□□□□□ -2.25
SMC4-218ENST00000486711 A0A0J9YY99 117 aa1□□□□□ -2.25
SMC4-218ENST00000486711 LOC107986453A0A1B0GWG9 222 aa1□□□□□ -2.25
SMC4-218ENST00000486711 LSM3P62310 102 aaKnown RBP1□□□□□ -2.25
SMC4-218ENST00000486711 TMEM35BQ8NCS4 154 aa1□□□□□ -2.25
SMC4-218ENST00000486711 CIB3Q96Q77 187 aaPredicted RBP1□□□□□ -2.25
SMC4-218ENST00000486711 NIT2Q9NQR4 276 aa1□□□□□ -2.25
SMC4-218ENST00000486711 PBRM1Q86U86 1689 aa1□□□□□ -2.25
SMC4-218ENST00000486711 MAP3K1Q13233 1512 aa0.99□□□□□ -2.25
SMC4-218ENST00000486711 PTPRFP10586 1907 aa0.99□□□□□ -2.25
SMC4-218ENST00000486711 BCL9O00512 1426 aa0.99□□□□□ -2.25
SMC4-218ENST00000486711 ANKRD30AQ9BXX3 1397 aa0.99□□□□□ -2.25
SMC4-218ENST00000486711 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.99□□□□□ -2.25
SMC4-218ENST00000486711 BBIP1A8MTZ0 92 aa0.99□□□□□ -2.25
SMC4-218ENST00000486711 TSTD3H0UI37 97 aa0.99□□□□□ -2.25
SMC4-218ENST00000486711 SULT1C4O75897 302 aa0.99□□□□□ -2.25
SMC4-218ENST00000486711 RPL7P18124 248 aaKnown RBP0.99□□□□□ -2.25
SMC4-218ENST00000486711 FXYD4P59646 89 aa0.99□□□□□ -2.25
SMC4-218ENST00000486711 C5orf17Q8NAS9 161 aa0.99□□□□□ -2.25
SMC4-218ENST00000486711 LIMD2Q9BT23 127 aa0.99□□□□□ -2.25
SMC4-218ENST00000486711 SMARCA2P51531 1590 aa0.99□□□□□ -2.25
SMC4-218ENST00000486711 DLC1Q96QB1 1528 aa0.99□□□□□ -2.25
SMC4-218ENST00000486711 ERCC6Q03468 1493 aa0.99□□□□□ -2.25
SMC4-218ENST00000486711 MED12Q93074 2177 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 WDR97A6NE52 1622 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 PHRF1Q9P1Y6 1649 aaKnown RBP0.98□□□□□ -2.25
SMC4-218ENST00000486711 TRBV30A0A0K0K1B3 111 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 ZNF727A8MUV8 499 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 CRYGSP22914 178 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 Q6ZQY7 126 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 TMEM229BQ8NBD8 167 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 MORN4Q8NDC4 146 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 CCDC115Q96NT0 180 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 CUX1P39880 1505 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 ERICH3Q5RHP9 1530 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 ZMYM4Q5VZL5 1548 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 PLEKHH2Q8IVE3 1493 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 CNTRLQ7Z7A1 2325 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 CHD3Q12873 2000 aaKnown RBP0.98□□□□□ -2.25
SMC4-218ENST00000486711 UACAQ9BZF9 1416 aa0.98□□□□□ -2.25
SMC4-218ENST00000486711 CCNB3Q8WWL7 1395 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 LOC107984156A0A0G2JMH3 177 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 LOC107984640A0A0U1RRK4 108 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 ARL5CA6NH57 179 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 H0YJX3 145 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 PDE6GP18545 87 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 DNAJB13P59910 316 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 ARL17AQ8IVW1 177 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 FAM107BQ9H098 131 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 FKBP11Q9NYL4 201 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 A2MP01023 1474 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 TCOF1Q13428 1488 aaKnown RBP0.97□□□□□ -2.25
SMC4-218ENST00000486711 KIF21AQ7Z4S6 1674 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 DAPK1P53355 1430 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 CNTLNQ9NXG0 1405 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 RRBP1Q9P2E9 1410 aaKnown RBP0.97□□□□□ -2.25
SMC4-218ENST00000486711 KIF21BO75037 1637 aa0.97□□□□□ -2.25
SMC4-218ENST00000486711 THOC2Q8NI27 1593 aaKnown RBP0.96□□□□□ -2.26
SMC4-218ENST00000486711 EFCAB5A4FU69 1503 aa0.96□□□□□ -2.26
SMC4-218ENST00000486711 GNG14A0A1W2PPG7 69 aa0.96□□□□□ -2.26
SMC4-218ENST00000486711 FOXA3P55318 350 aaPredicted RBP0.96□□□□□ -2.26
SMC4-218ENST00000486711 RPL37AP61513 92 aaKnown RBP0.96□□□□□ -2.26
SMC4-218ENST00000486711 IZUMO2Q6UXV1 221 aa0.96□□□□□ -2.26
SMC4-218ENST00000486711 C3orf62Q6ZUJ4 267 aa0.96□□□□□ -2.26
SMC4-218ENST00000486711 C10orf111Q8N326 155 aa0.96□□□□□ -2.26
SMC4-218ENST00000486711 NABP2Q9BQ15 211 aa0.96□□□□□ -2.26
SMC4-218ENST00000486711 CBLN4Q9NTU7 201 aa0.96□□□□□ -2.26
SMC4-218ENST00000486711 HSPB11Q9Y547 144 aa0.96□□□□□ -2.26
SMC4-218ENST00000486711 MPC1Q9Y5U8 109 aa0.96□□□□□ -2.26
SMC4-218ENST00000486711 CCDC88BA6NC98 1476 aa0.96□□□□□ -2.26
SMC4-218ENST00000486711 VPS8Q8N3P4 1428 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms