RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 USP54Q70EL1 1684 aa0.24□□□□□ -2.37
LTN1-206ENST00000486427 YTHDC2Q9H6S0 1430 aaKnown RBP0.23□□□□□ -2.37
LTN1-206ENST00000486427 KIAA1549LQ6ZVL6 1849 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 A6NN06 94 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 E5RI56 91 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 PPP5D1E7EU14 171 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 GABARAPH6UMI1 98 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 KPNA4O00629 521 aaPredicted RBP0.23□□□□□ -2.37
LTN1-206ENST00000486427 FABP2P12104 132 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 FABP4P15090 132 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 RPL37AP61513 92 aaKnown RBP0.23□□□□□ -2.37
LTN1-206ENST00000486427 TMEM78Q5T7P6 136 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 HRCT1Q6UXD1 115 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 CROCCP2Q86T23 111 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 DIRC1Q969H9 104 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 OR4C12Q96R67 309 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 CCL19Q99731 98 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 BOKQ9UMX3 212 aaPredicted RBP0.23□□□□□ -2.37
LTN1-206ENST00000486427 TPRKBQ9Y3C4 175 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 PBRM1Q86U86 1689 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 CTTNBP2Q8WZ74 1663 aa0.23□□□□□ -2.37
LTN1-206ENST00000486427 ZCCHC11Q5TAX3 1644 aaKnown RBP0.23□□□□□ -2.37
LTN1-206ENST00000486427 FER1L6Q2WGJ9 1857 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 TRPM7Q96QT4 1865 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 TRAPPC8Q9Y2L5 1435 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.22□□□□□ -2.37
LTN1-206ENST00000486427 A0A1W2PRE2 83 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 S100A11P31949 105 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 MRPS36P82909 103 aaKnown RBP0.22□□□□□ -2.37
LTN1-206ENST00000486427 NEDD8Q15843 81 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 Q86TA4 180 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 STX12Q86Y82 276 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 TEX29Q8N6K0 151 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 PLAC4Q8WY50 150 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 RMND5BQ96G75 393 aaPredicted RBP0.22□□□□□ -2.37
LTN1-206ENST00000486427 EFCAB11Q9BUY7 163 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 PCBD2Q9H0N5 130 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 FKBP11Q9NYL4 201 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 LAMTOR3Q9UHA4 124 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 GPR98Q8WXG9 6306 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 LOC285556D6RIA3 1793 aa0.22□□□□□ -2.37
LTN1-206ENST00000486427 USP24Q9UPU5 2620 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 ROCK1Q13464 1354 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 MEGF8Q7Z7M0 2845 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 C3orf85A0A1B0GTC6 90 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 FABP1P07148 127 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 BCL2P10415 239 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 SDC2P34741 201 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 C10orf111Q8N326 155 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 OR4B1Q8NGF8 309 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 OR5H6Q8NGV6 325 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 CLEC2BQ92478 149 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 ISOC1Q96CN7 298 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 MCEEQ96PE7 176 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 LPAR5Q9H1C0 372 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 DLC1Q96QB1 1528 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 TCOF1Q13428 1488 aaKnown RBP0.21□□□□□ -2.38
LTN1-206ENST00000486427 FAM135BQ49AJ0 1406 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 MYH1P12882 1939 aa0.21□□□□□ -2.38
LTN1-206ENST00000486427 LOC107984156A0A0G2JMH3 177 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 C5orf58C9J3I9 102 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 TRACP01848 142 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 RPL7P18124 248 aaKnown RBP0.2□□□□□ -2.38
LTN1-206ENST00000486427 S100A5P33763 92 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 POLR2HP52434 150 aaKnown RBP0.2□□□□□ -2.38
LTN1-206ENST00000486427 FXYD6P3P58550 94 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 MAXP61244 160 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 CASC2Q6XLA1 102 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 LINC00305Q7Z4B0 112 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 ARL17AQ8IVW1 177 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 C5orf17Q8NAS9 161 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 OR5AK2Q8NH90 309 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 THEM6Q8WUY1 208 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 PRELID3AQ96N28 172 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 NABP2Q9BQ15 211 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 CCDC32Q9BV29 185 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 SMPXQ9UHP9 88 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 TRAPPC2LQ9UL33 140 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 LAMTOR2Q9Y2Q5 125 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 MED31Q9Y3C7 131 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 BCORL1Q5H9F3 1711 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 ATG2AQ2TAZ0 1938 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 NINQ8N4C6 2090 aa0.2□□□□□ -2.38
LTN1-206ENST00000486427 TRAV13-1A0A0B4J241 112 aa0.19□□□□□ -2.38
LTN1-206ENST00000486427 TRBV27A0A0K0K1C4 114 aa0.19□□□□□ -2.38
LTN1-206ENST00000486427 IGHV3-30P01768 117 aa0.19□□□□□ -2.38
LTN1-206ENST00000486427 IGHV3-30-5P0DP03 117 aa0.19□□□□□ -2.38
LTN1-206ENST00000486427 TPT1P13693 172 aaKnown RBP0.19□□□□□ -2.38
LTN1-206ENST00000486427 NDUFA6P56556 154 aa0.19□□□□□ -2.38
LTN1-206ENST00000486427 QRFPP83859 136 aa0.19□□□□□ -2.38
LTN1-206ENST00000486427 CSAG1Q6PB30 78 aa0.19□□□□□ -2.38
LTN1-206ENST00000486427 GRPEL2Q8TAA5 225 aa0.19□□□□□ -2.38
LTN1-206ENST00000486427 CBLN4Q9NTU7 201 aa0.19□□□□□ -2.38
LTN1-206ENST00000486427 ATPIF1Q9UII2 106 aa0.19□□□□□ -2.38
LTN1-206ENST00000486427 XIRP1Q702N8 1843 aaKnown RBP0.19□□□□□ -2.38
LTN1-206ENST00000486427 FGD6Q6ZV73 1430 aa0.19□□□□□ -2.38
LTN1-206ENST00000486427 KNTC1P50748 2209 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 DSPPQ9NZW4 1301 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 TRBV7-6A0A0J9YX20 115 aa0.18□□□□□ -2.38
LTN1-206ENST00000486427 LOC107984640A0A0U1RRK4 108 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms