RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 THEM6Q8WUY1 208 aa0.5□□□□□ -2.33
SUPT20H-215ENST00000478911 CLEC2BQ92478 149 aa0.5□□□□□ -2.33
SUPT20H-215ENST00000478911 RMND5BQ96G75 393 aaPredicted RBP0.5□□□□□ -2.33
SUPT20H-215ENST00000478911 PRELID3AQ96N28 172 aa0.5□□□□□ -2.33
SUPT20H-215ENST00000478911 V9GYQ6 96 aa0.5□□□□□ -2.33
SUPT20H-215ENST00000478911 ZCCHC11Q5TAX3 1644 aaKnown RBP0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 ASCC3Q8N3C0 2202 aaKnown RBP0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 TRBV27A0A0K0K1C4 114 aa0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 C3orf85A0A1B0GTC6 90 aa0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 NUPR2A6NF83 97 aa0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 NEFHP12036 1026 aa0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 TPT1P13693 172 aaKnown RBP0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 MAXP61244 160 aa0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 NEDD8Q15843 81 aa0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 CASC2Q6XLA1 102 aa0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 Q6ZQY7 126 aa0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 CENPHQ9H3R5 247 aa0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 MED31Q9Y3C7 131 aa0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 AHNAKQ09666 5890 aaKnown RBP0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 ZNF469Q96JG9 3925 aaPredicted RBP0.49□□□□□ -2.33
SUPT20H-215ENST00000478911 TRAV13-1A0A0B4J241 112 aa0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 A0A1B0GV72 72 aa0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 A6NN06 94 aa0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 FAM107AO95990 144 aa0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 IGHV3-30P01768 117 aa0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 IGHV3-30-5P0DP03 117 aa0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 POLR2HP52434 150 aaKnown RBP0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 RPL37AP61513 92 aaKnown RBP0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 TEX29Q8N6K0 151 aa0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 C5orf17Q8NAS9 161 aa0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 GRPEL2Q8TAA5 225 aa0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 NABP2Q9BQ15 211 aa0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 LXNQ9BS40 222 aa0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 FKBP11Q9NYL4 201 aa0.48□□□□□ -2.33
SUPT20H-215ENST00000478911 FANCMQ8IYD8 2048 aa0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 TRBV7-6A0A0J9YX20 115 aa0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 H3BMG7 143 aa0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 SAA1P0DJI8 122 aaPredicted RBP0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 RPL7P18124 248 aaKnown RBP0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 TFAMQ00059 246 aaKnown RBP0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 C10orf111Q8N326 155 aa0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 MORN4Q8NDC4 146 aa0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 CIB3Q96Q77 187 aaPredicted RBP0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 CCL19Q99731 98 aa0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 LPAR5Q9H1C0 372 aa0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 TRAPPC2LQ9UL33 140 aa0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 DLC1Q96QB1 1528 aa0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 TCOF1Q13428 1488 aaKnown RBP0.47□□□□□ -2.33
SUPT20H-215ENST00000478911 PTPRDP23468 1912 aa0.46□□□□□ -2.34
SUPT20H-215ENST00000478911 PGRMC1O00264 195 aaKnown RBP0.46□□□□□ -2.34
SUPT20H-215ENST00000478911 IFNA21P01568 189 aa0.46□□□□□ -2.34
SUPT20H-215ENST00000478911 IZUMO2Q6UXV1 221 aa0.46□□□□□ -2.34
SUPT20H-215ENST00000478911 Q86TA4 180 aa0.46□□□□□ -2.34
SUPT20H-215ENST00000478911 TMEM229BQ8NBD8 167 aa0.46□□□□□ -2.34
SUPT20H-215ENST00000478911 ZFC3H1O60293 1989 aaKnown RBP0.46□□□□□ -2.34
SUPT20H-215ENST00000478911 ANKRD31Q8N7Z5 1873 aa0.46□□□□□ -2.34
SUPT20H-215ENST00000478911 LOC107984156A0A0G2JMH3 177 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 LOC107984640A0A0U1RRK4 108 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 CCL4P13236 92 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 SPINT3P49223 89 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 SRP9P49458 86 aaKnown RBP0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 TMEM128Q5BJH2 165 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 TOMM20LQ6UXN7 152 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 ARL17AQ8IVW1 177 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 OR9Q1Q8NGQ5 310 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 PLAC4Q8WY50 150 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 CBLN4Q9NTU7 201 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 MPC1Q9Y5U8 109 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 PBRM1Q86U86 1689 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 NUP210Q8TEM1 1887 aaPredicted RBP0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 FAM135BQ49AJ0 1406 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 MUC4Q99102 2169 aa0.45□□□□□ -2.34
SUPT20H-215ENST00000478911 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 LOC107986453A0A1B0GWG9 222 aa0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 SULT1C4O75897 302 aa0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 SLC25A4P12235 298 aa0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 CRYGSP22914 178 aa0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 RPS3P23396 243 aaKnown RBP eCLIP0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 ZNF137PP52743 207 aa0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 CSAG1Q6PB30 78 aa0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 TCTEX1D1Q8N7M0 179 aa0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 CCDC115Q96NT0 180 aa0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 AP1S3Q96PC3 154 aa0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 DDA1Q9BW61 102 aa0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 MUC5BQ9HC84 5762 aaPredicted RBP0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 FGD6Q6ZV73 1430 aa0.44□□□□□ -2.34
SUPT20H-215ENST00000478911 DSPPQ9NZW4 1301 aa0.43□□□□□ -2.34
SUPT20H-215ENST00000478911 ZGRF1Q86YA3 2104 aa0.43□□□□□ -2.34
SUPT20H-215ENST00000478911 A0A1W2PPB8 328 aa0.43□□□□□ -2.34
SUPT20H-215ENST00000478911 A0A1W2PRS3 328 aa0.43□□□□□ -2.34
SUPT20H-215ENST00000478911 ARL5CA6NH57 179 aa0.43□□□□□ -2.34
SUPT20H-215ENST00000478911 BBIP1A8MTZ0 92 aa0.43□□□□□ -2.34
SUPT20H-215ENST00000478911 KIR3DP1A8MWS1 328 aa0.43□□□□□ -2.34
SUPT20H-215ENST00000478911 GYPBP06028 91 aa0.43□□□□□ -2.34
SUPT20H-215ENST00000478911 DNAJB13P59910 316 aa0.43□□□□□ -2.34
SUPT20H-215ENST00000478911 BLCAPP62952 87 aa0.43□□□□□ -2.34
SUPT20H-215ENST00000478911 CCSMST1Q4G0I0 132 aa0.43□□□□□ -2.34
SUPT20H-215ENST00000478911 SAMD13Q5VXD3 122 aa0.43□□□□□ -2.34
SUPT20H-215ENST00000478911 Q6ZS92 163 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms