RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 NUPR2A6NF83 97 aa0.42□□□□□ -2.34
LTN1-204ENST00000475344 FABP4P15090 132 aa0.42□□□□□ -2.34
LTN1-204ENST00000475344 S100A11P31949 105 aa0.42□□□□□ -2.34
LTN1-204ENST00000475344 MRPS36P82909 103 aaKnown RBP0.42□□□□□ -2.34
LTN1-204ENST00000475344 STX12Q86Y82 276 aa0.42□□□□□ -2.34
LTN1-204ENST00000475344 KIAA1549LQ6ZVL6 1849 aa0.42□□□□□ -2.34
LTN1-204ENST00000475344 ROCK1Q13464 1354 aa0.42□□□□□ -2.34
LTN1-204ENST00000475344 TRAPPC8Q9Y2L5 1435 aa0.41□□□□□ -2.34
LTN1-204ENST00000475344 A0A0D9SG42 100 aa0.41□□□□□ -2.34
LTN1-204ENST00000475344 A0A1W2PRE2 83 aa0.41□□□□□ -2.34
LTN1-204ENST00000475344 ZNF727A8MUV8 499 aa0.41□□□□□ -2.34
LTN1-204ENST00000475344 BCL2P10415 239 aa0.41□□□□□ -2.34
LTN1-204ENST00000475344 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
LTN1-204ENST00000475344 HRCT1Q6UXD1 115 aa0.41□□□□□ -2.34
LTN1-204ENST00000475344 LINC00299Q6ZSB3 139 aa0.41□□□□□ -2.34
LTN1-204ENST00000475344 OR5H6Q8NGV6 325 aa0.41□□□□□ -2.34
LTN1-204ENST00000475344 ISOC1Q96CN7 298 aa0.41□□□□□ -2.34
LTN1-204ENST00000475344 EFCAB11Q9BUY7 163 aa0.41□□□□□ -2.34
LTN1-204ENST00000475344 KIAA1107Q9UPP5 1409 aa0.4□□□□□ -2.34
LTN1-204ENST00000475344 LOC285556D6RIA3 1793 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 KCPQ6ZWJ8 1503 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 A0A0J9YY99 117 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 TRBV30A0A0K0K1B3 111 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 FABP1P07148 127 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 S100A5P33763 92 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 NEDD8Q15843 81 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 Q86TA4 180 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 TEX29Q8N6K0 151 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 OR4B1Q8NGF8 309 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 RMND5BQ96G75 393 aaPredicted RBP0.4□□□□□ -2.35
LTN1-204ENST00000475344 MCEEQ96PE7 176 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 FKBP11Q9NYL4 201 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 XIRP1Q702N8 1843 aaKnown RBP0.4□□□□□ -2.35
LTN1-204ENST00000475344 FSIP2Q5CZC0 6907 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 USP54Q70EL1 1684 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 PBRM1Q86U86 1689 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 CTTNBP2Q8WZ74 1663 aa0.4□□□□□ -2.35
LTN1-204ENST00000475344 KMT2DO14686 5537 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.39□□□□□ -2.35
LTN1-204ENST00000475344 C3orf85A0A1B0GTC6 90 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 C5orf58C9J3I9 102 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 TRACP01848 142 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 PDE6GP18545 87 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 SDC2P34741 201 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 FXYD6P3P58550 94 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 ESPL1Q14674 2120 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 Q6ZS92 163 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 LINC00305Q7Z4B0 112 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 CLEC2BQ92478 149 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 PRELID3AQ96N28 172 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 CCDC32Q9BV29 185 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 BOKQ9UMX3 212 aaPredicted RBP0.39□□□□□ -2.35
LTN1-204ENST00000475344 LAMTOR2Q9Y2Q5 125 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 SPAG17Q6Q759 2223 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 ABCA4P78363 2273 aa0.39□□□□□ -2.35
LTN1-204ENST00000475344 RPL7P18124 248 aaKnown RBP0.38□□□□□ -2.35
LTN1-204ENST00000475344 RPL37AP61513 92 aaKnown RBP0.38□□□□□ -2.35
LTN1-204ENST00000475344 CASC2Q6XLA1 102 aa0.38□□□□□ -2.35
LTN1-204ENST00000475344 Q6ZQY7 126 aa0.38□□□□□ -2.35
LTN1-204ENST00000475344 C5orf17Q8NAS9 161 aa0.38□□□□□ -2.35
LTN1-204ENST00000475344 OR5AK2Q8NH90 309 aa0.38□□□□□ -2.35
LTN1-204ENST00000475344 THEM6Q8WUY1 208 aa0.38□□□□□ -2.35
LTN1-204ENST00000475344 CCL19Q99731 98 aa0.38□□□□□ -2.35
LTN1-204ENST00000475344 NABP2Q9BQ15 211 aa0.38□□□□□ -2.35
LTN1-204ENST00000475344 PLAC8Q9NZF1 115 aa0.38□□□□□ -2.35
LTN1-204ENST00000475344 SMPXQ9UHP9 88 aa0.38□□□□□ -2.35
LTN1-204ENST00000475344 ATPIF1Q9UII2 106 aa0.38□□□□□ -2.35
LTN1-204ENST00000475344 TRAPPC2LQ9UL33 140 aa0.38□□□□□ -2.35
LTN1-204ENST00000475344 MED31Q9Y3C7 131 aa0.38□□□□□ -2.35
LTN1-204ENST00000475344 TNCP24821 2201 aa0.38□□□□□ -2.35
LTN1-204ENST00000475344 MED13LQ71F56 2210 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 LOC107984156A0A0G2JMH3 177 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 TRBV27A0A0K0K1C4 114 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 PRH1P02810 166 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 TPT1P13693 172 aaKnown RBP0.37□□□□□ -2.35
LTN1-204ENST00000475344 SPINT3P49223 89 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 NDUFA6P56556 154 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 MAXP61244 160 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 CSAG1Q6PB30 78 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 ARL17AQ8IVW1 177 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 PLAC4Q8WY50 150 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 LPAR5Q9H1C0 372 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 JPT1Q9UK76 154 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 ANK2Q01484 3957 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 ZCCHC11Q5TAX3 1644 aaKnown RBP0.37□□□□□ -2.35
LTN1-204ENST00000475344 DLC1Q96QB1 1528 aa0.37□□□□□ -2.35
LTN1-204ENST00000475344 HELZP42694 1942 aaKnown RBP0.36□□□□□ -2.35
LTN1-204ENST00000475344 AFDNP55196 1824 aaKnown RBP0.36□□□□□ -2.35
LTN1-204ENST00000475344 TCOF1Q13428 1488 aaKnown RBP0.36□□□□□ -2.35
LTN1-204ENST00000475344 TRAV13-1A0A0B4J241 112 aa0.36□□□□□ -2.35
LTN1-204ENST00000475344 A6NN06 94 aa0.36□□□□□ -2.35
LTN1-204ENST00000475344 H3BMG7 143 aa0.36□□□□□ -2.35
LTN1-204ENST00000475344 IGHV3-30P01768 117 aa0.36□□□□□ -2.35
LTN1-204ENST00000475344 IGHV3-30-5P0DP03 117 aa0.36□□□□□ -2.35
LTN1-204ENST00000475344 CCL4P13236 92 aa0.36□□□□□ -2.35
LTN1-204ENST00000475344 POLR2HP52434 150 aaKnown RBP0.36□□□□□ -2.35
LTN1-204ENST00000475344 QRFPP83859 136 aa0.36□□□□□ -2.35
LTN1-204ENST00000475344 GRPEL2Q8TAA5 225 aa0.36□□□□□ -2.35
LTN1-204ENST00000475344 CIB3Q96Q77 187 aaPredicted RBP0.36□□□□□ -2.35
LTN1-204ENST00000475344 V9GYQ6 96 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms