RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 CTSGP08311 255 aa13.29□□□□□ -0.28
MRPL28-208ENST00000469744 MGST1P10620 155 aaKnown RBP13.29□□□□□ -0.28
MRPL28-208ENST00000469744 HIST3H2BBQ8N257 126 aa13.29□□□□□ -0.28
MRPL28-208ENST00000469744 LINC00479Q96M42 142 aa13.29□□□□□ -0.28
MRPL28-208ENST00000469744 C12orf57Q99622 126 aa13.29□□□□□ -0.28
MRPL28-208ENST00000469744 MLST8Q9BVC4 326 aa13.29□□□□□ -0.28
MRPL28-208ENST00000469744 TRAPPC1Q9Y5R8 145 aa13.29□□□□□ -0.28
MRPL28-208ENST00000469744 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.29□□□□□ -0.28
MRPL28-208ENST00000469744 CSN3P07498 182 aa13.29□□□□□ -0.28
MRPL28-208ENST00000469744 NHLRC4P0CG21 123 aaPredicted RBP13.29□□□□□ -0.28
MRPL28-208ENST00000469744 GNG5P63218 68 aa13.29□□□□□ -0.28
MRPL28-208ENST00000469744 USF2Q15853 346 aaPredicted RBP13.29□□□□□ -0.28
MRPL28-208ENST00000469744 RNASE7Q9H1E1 156 aaKnown RBP13.29□□□□□ -0.28
MRPL28-208ENST00000469744 ZNF492Q9P255 531 aa13.29□□□□□ -0.28
MRPL28-208ENST00000469744 U3KQK5 164 aa13.29□□□□□ -0.28
MRPL28-208ENST00000469744 NBEAL2Q6ZNJ1 2754 aa13.28□□□□□ -0.28
MRPL28-208ENST00000469744 GATCO43716 136 aaKnown RBP13.28□□□□□ -0.28
MRPL28-208ENST00000469744 LTAP01374 205 aa13.28□□□□□ -0.28
MRPL28-208ENST00000469744 FRMD6-AS1P0C7T7 363 aa13.28□□□□□ -0.28
MRPL28-208ENST00000469744 S100A2P29034 98 aa13.28□□□□□ -0.28
MRPL28-208ENST00000469744 SBSPONQ8IVN8 264 aa13.28□□□□□ -0.28
MRPL28-208ENST00000469744 CMTM2Q8TAZ6 248 aa13.28□□□□□ -0.28
MRPL28-208ENST00000469744 GRAMD2BQ96HH9 432 aa13.28□□□□□ -0.28
MRPL28-208ENST00000469744 TRBV7-1A0A0A6YYK4 115 aa13.27□□□□□ -0.29
MRPL28-208ENST00000469744 TRAV34A0A0B4J273 112 aa13.27□□□□□ -0.29
MRPL28-208ENST00000469744 RPL7P18124 248 aaKnown RBP13.27□□□□□ -0.29
MRPL28-208ENST00000469744 WDR73Q6P4I2 378 aa13.27□□□□□ -0.29
MRPL28-208ENST00000469744 TMEM183AQ8IXX5 376 aa13.27□□□□□ -0.29
MRPL28-208ENST00000469744 EEF1AKMT3Q96AZ1 226 aa13.27□□□□□ -0.29
MRPL28-208ENST00000469744 ZNF414Q96IQ9 312 aa13.27□□□□□ -0.29
MRPL28-208ENST00000469744 CCDC140Q96MF4 163 aa13.27□□□□□ -0.29
MRPL28-208ENST00000469744 WWC2-AS2Q96NR7 200 aa13.27□□□□□ -0.29
MRPL28-208ENST00000469744 GNB1LQ9BYB4 327 aa13.27□□□□□ -0.29
MRPL28-208ENST00000469744 RABAC1Q9UI14 185 aa13.27□□□□□ -0.29
MRPL28-208ENST00000469744 SERTM2A0A1B0GWG4 89 aa13.26□□□□□ -0.29
MRPL28-208ENST00000469744 IZUMO1RA6ND01 250 aa13.26□□□□□ -0.29
MRPL28-208ENST00000469744 OR2T8A6NH00 312 aa13.26□□□□□ -0.29
MRPL28-208ENST00000469744 IFITM10A6NMD0 228 aa13.26□□□□□ -0.29
MRPL28-208ENST00000469744 ZNF705GA8MUZ8 300 aaPredicted RBP13.26□□□□□ -0.29
MRPL28-208ENST00000469744 ZNF253O75346 499 aa13.26□□□□□ -0.29
MRPL28-208ENST00000469744 MT-ND6P03923 174 aa13.26□□□□□ -0.29
MRPL28-208ENST00000469744 EDN2P20800 178 aa13.26□□□□□ -0.29
MRPL28-208ENST00000469744 RASL11AQ6T310 242 aa13.26□□□□□ -0.29
MRPL28-208ENST00000469744 CLEC19AQ6UXS0 136 aa13.26□□□□□ -0.29
MRPL28-208ENST00000469744 SIGLEC15Q6ZMC9 328 aa13.26□□□□□ -0.29
MRPL28-208ENST00000469744 ADMP35318 185 aa13.25□□□□□ -0.29
MRPL28-208ENST00000469744 PSG9Q00887 426 aa13.25□□□□□ -0.29
MRPL28-208ENST00000469744 CT83Q5H943 113 aa13.25□□□□□ -0.29
MRPL28-208ENST00000469744 ADAMTSL5Q6ZMM2 481 aa13.25□□□□□ -0.29
MRPL28-208ENST00000469744 OR8I2Q8N0Y5 310 aa13.25□□□□□ -0.29
MRPL28-208ENST00000469744 Q8N1Y9 231 aa13.25□□□□□ -0.29
MRPL28-208ENST00000469744 TMEM75Q8N9X5 138 aa13.25□□□□□ -0.29
MRPL28-208ENST00000469744 NUDT10Q8NFP7 164 aa13.25□□□□□ -0.29
MRPL28-208ENST00000469744 NUDT11Q96G61 164 aa13.25□□□□□ -0.29
MRPL28-208ENST00000469744 XKRY2A2RUG3 117 aa13.24□□□□□ -0.29
MRPL28-208ENST00000469744 K7EQM0 130 aa13.24□□□□□ -0.29
MRPL28-208ENST00000469744 PEMTQ9UBM1 199 aa13.24□□□□□ -0.29
MRPL28-208ENST00000469744 SELENOKQ9Y6D0 94 aa13.24□□□□□ -0.29
MRPL28-208ENST00000469744 FBLL1A6NHQ2 334 aaKnown RBP13.23□□□□□ -0.29
MRPL28-208ENST00000469744 SNRPCP09234 159 aaKnown RBP13.23□□□□□ -0.29
MRPL28-208ENST00000469744 IGHV4-30-4P0DP06 118 aa13.23□□□□□ -0.29
MRPL28-208ENST00000469744 ARL3P36405 182 aa13.23□□□□□ -0.29
MRPL28-208ENST00000469744 Q86TA4 180 aa13.23□□□□□ -0.29
MRPL28-208ENST00000469744 ZFP30Q9Y2G7 519 aa13.23□□□□□ -0.29
MRPL28-208ENST00000469744 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
MRPL28-208ENST00000469744 H3BTX0 84 aa13.23□□□□□ -0.29
MRPL28-208ENST00000469744 TOMM20LQ6UXN7 152 aa13.23□□□□□ -0.29
MRPL28-208ENST00000469744 EXOC3-AS1Q8N2X6 119 aa13.23□□□□□ -0.29
MRPL28-208ENST00000469744 NHLRC2Q8NBF2 726 aa13.23□□□□□ -0.29
MRPL28-208ENST00000469744 TSKUQ8WUA8 353 aa13.23□□□□□ -0.29
MRPL28-208ENST00000469744 AAMDCQ9H7C9 122 aa13.23□□□□□ -0.29
MRPL28-208ENST00000469744 ZFAND3Q9H8U3 227 aa13.23□□□□□ -0.29
MRPL28-208ENST00000469744 SIGLEC8Q9NYZ4 499 aa13.23□□□□□ -0.29
MRPL28-208ENST00000469744 HUWE1Q7Z6Z7 4374 aaKnown RBP13.22□□□□□ -0.29
MRPL28-208ENST00000469744 IGLV2-11P01706 119 aa13.22□□□□□ -0.29
MRPL28-208ENST00000469744 CLEC3BP05452 202 aa13.22□□□□□ -0.29
MRPL28-208ENST00000469744 GPR183P32249 361 aa13.22□□□□□ -0.29
MRPL28-208ENST00000469744 RELQ04864 619 aaPredicted RBP13.22□□□□□ -0.29
MRPL28-208ENST00000469744 DNLZQ5SXM8 178 aa13.22□□□□□ -0.29
MRPL28-208ENST00000469744 GFI1BQ5VTD9 330 aa13.22□□□□□ -0.29
MRPL28-208ENST00000469744 LCN12Q6JVE5 192 aa13.22□□□□□ -0.29
MRPL28-208ENST00000469744 OR4B1Q8NGF8 309 aa13.22□□□□□ -0.29
MRPL28-208ENST00000469744 MRPL18Q9H0U6 180 aaKnown RBP13.22□□□□□ -0.29
MRPL28-208ENST00000469744 RPH3ALQ9UNE2 315 aa13.22□□□□□ -0.29
MRPL28-208ENST00000469744 A0A087X0K7 114 aa13.21□□□□□ -0.3
MRPL28-208ENST00000469744 FAM231BA6NCW3 169 aa13.21□□□□□ -0.3
MRPL28-208ENST00000469744 C2orf70A6NJV1 201 aa13.21□□□□□ -0.3
MRPL28-208ENST00000469744 S100A12P80511 92 aa13.21□□□□□ -0.3
MRPL28-208ENST00000469744 CD300EQ496F6 205 aaPredicted RBP13.21□□□□□ -0.3
MRPL28-208ENST00000469744 FAM209BQ5JX69 171 aa13.21□□□□□ -0.3
MRPL28-208ENST00000469744 C1orf194Q5T5A4 169 aa13.21□□□□□ -0.3
MRPL28-208ENST00000469744 GOLT1AQ6ZVE7 132 aa13.21□□□□□ -0.3
MRPL28-208ENST00000469744 DYNLRB2Q8TF09 96 aa13.21□□□□□ -0.3
MRPL28-208ENST00000469744 C17orf77Q96MU5 243 aa13.21□□□□□ -0.3
MRPL28-208ENST00000469744 NAT8BQ9UHF3 227 aa13.21□□□□□ -0.3
MRPL28-208ENST00000469744 IGHV3-35A0A0C4DH35 117 aa13.2□□□□□ -0.3
MRPL28-208ENST00000469744 DIRC3C9JPN6 131 aa13.2□□□□□ -0.3
MRPL28-208ENST00000469744 HLA-DQA1P01909 254 aa13.2□□□□□ -0.3
MRPL28-208ENST00000469744 CBLN1P23435 193 aa13.2□□□□□ -0.3
MRPL28-208ENST00000469744 CSN1S1P47710 185 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms