RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 FAM74A1Q5RGS3 127 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 LYRM7Q5U5X0 104 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 LYPD2Q6UXB3 125 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 LINC00471Q8N535 108 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 LINC00311Q8N616 119 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 DEFB124Q8NES8 71 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 NPBQ8NG41 125 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 OR5C1Q8NGR4 320 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 OR2T10Q8NGZ9 312 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 H1FXQ92522 213 aaKnown RBP2.34□□□□□ -2.03
CCDC58-203ENST00000466854 RBPMSQ93062 196 aaKnown RBP2.34□□□□□ -2.03
CCDC58-203ENST00000466854 MAL2Q969L2 176 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 DPH3Q96FX2 82 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 ABHD14BQ96IU4 210 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 SNRNP25Q9BV90 132 aaKnown RBP2.34□□□□□ -2.03
CCDC58-203ENST00000466854 TSSK6Q9BXA6 273 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 AK3Q9UIJ7 227 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 MPC1Q9Y5U8 109 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 RP1L1Q8IWN7 2480 aaPredicted RBP2.34□□□□□ -2.04
CCDC58-203ENST00000466854 ARID1AO14497 2285 aa2.34□□□□□ -2.04
CCDC58-203ENST00000466854 NIPBLQ6KC79 2804 aaeCLIP2.33□□□□□ -2.04
CCDC58-203ENST00000466854 JMJD1CQ15652 2540 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 ANK1P16157 1881 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 TRAV9-1A0A075B6T8 112 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 IGHV3-72A0A0B4J1Y9 119 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 IGHV1-58A0A0C4DH39 117 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 IGKV1-9A0A0C4DH69 117 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 ODAMA1E959 279 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 ZNF705GA8MUZ8 300 aaPredicted RBP2.33□□□□□ -2.04
CCDC58-203ENST00000466854 C1orf196B1AJZ1 125 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 J3QR89 54 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 TAX1BP3O14907 124 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 LYZL6O75951 148 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 SNAPC5O75971 98 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 IGKV3-11P04433 115 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 CD2P06729 351 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 CTSDP07339 412 aaPredicted RBP2.33□□□□□ -2.04
CCDC58-203ENST00000466854 CD14P08571 375 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 ZNF32P17041 273 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 COX7A1P24310 79 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 CA7P43166 264 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 TIMM10P62072 90 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 CATR1Q13166 79 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 MSMO1Q15800 293 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 H2AFVQ71UI9 128 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 PHF5AQ7RTV0 110 aaKnown RBP2.33□□□□□ -2.04
CCDC58-203ENST00000466854 PCP2Q8IVA1 136 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 TTC9CQ8N5M4 171 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 OR10AC1Q8NH08 325 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 STAG3L4Q8TBR4 150 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 B9D2Q9BPU9 175 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 DERL1Q9BUN8 251 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 CHAC1Q9BUX1 264 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 TUBA4BQ9H853 241 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 FUT9Q9Y231 359 aa2.33□□□□□ -2.04
CCDC58-203ENST00000466854 APCP25054 2843 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 NBEAL1Q6ZS30 2694 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 RTTNQ86VV8 2226 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 TRAV27A0A087WT01 109 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 A0A087X0T9 212 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 IGHV1-45A0A0A0MS14 117 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 IRGMA1A4Y4 181 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 PINLYPA6NC86 204 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 B4DEV8 164 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 NDUFC2-KCTD14E9PQ53 114 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 TMEM256-PLSCR3K7ERE1 68 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 OR2T1O43869 369 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 ZNF861PO60384 105 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 PITX3O75364 302 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 HLA-DPB1P04440 258 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 SCGB1C2P0DMR2 95 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 NFYBP25208 207 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 ZNF136P52737 540 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 TPPP2P59282 170 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 GABARAPL2P60520 117 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 DCDP81605 110 aaKnown RBP2.32□□□□□ -2.04
CCDC58-203ENST00000466854 EBI3Q14213 229 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 TMEM183BQ1AE95 376 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 LGALS9BQ3B8N2 356 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 COA6Q5JTJ3 125 aaKnown RBP2.32□□□□□ -2.04
CCDC58-203ENST00000466854 CLLU1Q5K131 121 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 LGALS9CQ6DKI2 356 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 C22orf39Q6P5X5 142 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 AMTNQ6UX39 209 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 GTF2H5Q6ZYL4 71 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 AAED1Q7RTV5 226 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 ATOH7Q8N100 152 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 PACRGLQ8N7B6 248 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 SCGB1C1Q8TD33 95 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 RAB2BQ8WUD1 216 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 BRK1Q8WUW1 75 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 LINC00052Q96N35 136 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 TIMM17AQ99595 171 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 REG4Q9BYZ8 158 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 POLR2J2Q9GZM3 115 aaKnown RBP2.32□□□□□ -2.04
CCDC58-203ENST00000466854 POLR2J3Q9H1A7 115 aaKnown RBP2.32□□□□□ -2.04
CCDC58-203ENST00000466854 LINC00597Q9H2U6 94 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 SLC25A22Q9H936 323 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 ZNF286AQ9HBT8 521 aa2.32□□□□□ -2.04
CCDC58-203ENST00000466854 TAS2R8Q9NYW2 309 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms