RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 TRDV1A0A1B0GX56 115 aa0.37□□□□□ -2.35
USP9X-204ENST00000463829 TMEM238C9JI98 176 aa0.37□□□□□ -2.35
USP9X-204ENST00000463829 NEDD8Q15843 81 aa0.37□□□□□ -2.35
USP9X-204ENST00000463829 C3orf33Q6P1S2 294 aa0.37□□□□□ -2.35
USP9X-204ENST00000463829 C5orf17Q8NAS9 161 aa0.37□□□□□ -2.35
USP9X-204ENST00000463829 OR5AK2Q8NH90 309 aa0.37□□□□□ -2.35
USP9X-204ENST00000463829 GRPEL2Q8TAA5 225 aa0.37□□□□□ -2.35
USP9X-204ENST00000463829 DIRC1Q969H9 104 aa0.37□□□□□ -2.35
USP9X-204ENST00000463829 FAM103A1Q9BTL3 118 aaKnown RBP0.37□□□□□ -2.35
USP9X-204ENST00000463829 BOLA2Q9H3K6 86 aa0.37□□□□□ -2.35
USP9X-204ENST00000463829 NAT8BQ9UHF3 227 aa0.37□□□□□ -2.35
USP9X-204ENST00000463829 BCORL1Q5H9F3 1711 aa0.37□□□□□ -2.35
USP9X-204ENST00000463829 NUP210Q8TEM1 1887 aaPredicted RBP0.37□□□□□ -2.35
USP9X-204ENST00000463829 A6NN06 94 aa0.36□□□□□ -2.35
USP9X-204ENST00000463829 C5orf58C9J3I9 102 aa0.36□□□□□ -2.35
USP9X-204ENST00000463829 FABP2P12104 132 aa0.36□□□□□ -2.35
USP9X-204ENST00000463829 ISOC1Q96CN7 298 aa0.36□□□□□ -2.35
USP9X-204ENST00000463829 LRTM1Q9HBL6 345 aa0.36□□□□□ -2.35
USP9X-204ENST00000463829 TAF9BQ9HBM6 251 aa0.36□□□□□ -2.35
USP9X-204ENST00000463829 GID8Q9NWU2 228 aa0.36□□□□□ -2.35
USP9X-204ENST00000463829 KIAA1549LQ6ZVL6 1849 aa0.36□□□□□ -2.35
USP9X-204ENST00000463829 GPR98Q8WXG9 6306 aa0.35□□□□□ -2.35
USP9X-204ENST00000463829 ROCK1Q13464 1354 aa0.35□□□□□ -2.35
USP9X-204ENST00000463829 PPP5D1E7EU14 171 aa0.35□□□□□ -2.35
USP9X-204ENST00000463829 IGHV3-30P01768 117 aa0.35□□□□□ -2.35
USP9X-204ENST00000463829 TRACP01848 142 aa0.35□□□□□ -2.35
USP9X-204ENST00000463829 KRTAP2-3P0C7H8 128 aa0.35□□□□□ -2.35
USP9X-204ENST00000463829 IGHV3-30-5P0DP03 117 aa0.35□□□□□ -2.35
USP9X-204ENST00000463829 AP1S3Q96PC3 154 aa0.35□□□□□ -2.35
USP9X-204ENST00000463829 KRTAP2-4Q9BYR9 128 aa0.35□□□□□ -2.35
USP9X-204ENST00000463829 KRTAP2-1Q9BYU5 128 aa0.35□□□□□ -2.35
USP9X-204ENST00000463829 ZCCHC11Q5TAX3 1644 aaKnown RBP0.35□□□□□ -2.35
USP9X-204ENST00000463829 LOC285556D6RIA3 1793 aa0.34□□□□□ -2.35
USP9X-204ENST00000463829 C3orf85A0A1B0GTC6 90 aa0.34□□□□□ -2.36
USP9X-204ENST00000463829 E5RI56 91 aa0.34□□□□□ -2.36
USP9X-204ENST00000463829 SULT1C4O75897 302 aa0.34□□□□□ -2.36
USP9X-204ENST00000463829 CRYBA4P53673 196 aa0.34□□□□□ -2.36
USP9X-204ENST00000463829 CAV3P56539 151 aa0.34□□□□□ -2.36
USP9X-204ENST00000463829 TRIQKQ629K1 86 aa0.34□□□□□ -2.36
USP9X-204ENST00000463829 OR5H6Q8NGV6 325 aa0.34□□□□□ -2.36
USP9X-204ENST00000463829 TSKUQ8WUA8 353 aa0.34□□□□□ -2.36
USP9X-204ENST00000463829 LPAR5Q9H1C0 372 aa0.34□□□□□ -2.36
USP9X-204ENST00000463829 KMT2DO14686 5537 aa0.34□□□□□ -2.36
USP9X-204ENST00000463829 MDN1Q9NU22 5596 aa0.34□□□□□ -2.36
USP9X-204ENST00000463829 USP54Q70EL1 1684 aa0.33□□□□□ -2.36
USP9X-204ENST00000463829 ANK1P16157 1881 aa0.33□□□□□ -2.36
USP9X-204ENST00000463829 TNCP24821 2201 aa0.33□□□□□ -2.36
USP9X-204ENST00000463829 MAP1LC3B2A6NCE7 125 aa0.33□□□□□ -2.36
USP9X-204ENST00000463829 GABARAPH6UMI1 98 aa0.33□□□□□ -2.36
USP9X-204ENST00000463829 NDUFA6P56556 154 aa0.33□□□□□ -2.36
USP9X-204ENST00000463829 QRFPP83859 136 aa0.33□□□□□ -2.36
USP9X-204ENST00000463829 DCUN1D2Q6PH85 259 aa0.33□□□□□ -2.36
USP9X-204ENST00000463829 ANGPTL5Q86XS5 388 aa0.33□□□□□ -2.36
USP9X-204ENST00000463829 CLEC2BQ92478 149 aa0.33□□□□□ -2.36
USP9X-204ENST00000463829 PRELID3AQ96N28 172 aa0.33□□□□□ -2.36
USP9X-204ENST00000463829 CTTNBP2Q8WZ74 1663 aa0.33□□□□□ -2.36
USP9X-204ENST00000463829 TANC2Q9HCD6 1990 aa0.32□□□□□ -2.36
USP9X-204ENST00000463829 H7BYZ3 331 aa0.32□□□□□ -2.36
USP9X-204ENST00000463829 BCL2P10415 239 aa0.32□□□□□ -2.36
USP9X-204ENST00000463829 TPT1P13693 172 aaKnown RBP0.32□□□□□ -2.36
USP9X-204ENST00000463829 SDC2P34741 201 aa0.32□□□□□ -2.36
USP9X-204ENST00000463829 C10orf99Q6UWK7 81 aa0.32□□□□□ -2.36
USP9X-204ENST00000463829 CIB3Q96Q77 187 aaPredicted RBP0.32□□□□□ -2.36
USP9X-204ENST00000463829 LAMTOR2Q9Y2Q5 125 aa0.32□□□□□ -2.36
USP9X-204ENST00000463829 TCOF1Q13428 1488 aaKnown RBP0.32□□□□□ -2.36
USP9X-204ENST00000463829 ATG2AQ2TAZ0 1938 aa0.31□□□□□ -2.36
USP9X-204ENST00000463829 PFDN1O60925 122 aa0.31□□□□□ -2.36
USP9X-204ENST00000463829 SAA1P0DJI8 122 aaPredicted RBP0.31□□□□□ -2.36
USP9X-204ENST00000463829 RPS3P23396 243 aaKnown RBP eCLIP0.31□□□□□ -2.36
USP9X-204ENST00000463829 MAXP61244 160 aa0.31□□□□□ -2.36
USP9X-204ENST00000463829 XAF1Q6GPH4 301 aa0.31□□□□□ -2.36
USP9X-204ENST00000463829 IZUMO2Q6UXV1 221 aa0.31□□□□□ -2.36
USP9X-204ENST00000463829 DLC1Q96QB1 1528 aa0.31□□□□□ -2.36
USP9X-204ENST00000463829 NINQ8N4C6 2090 aa0.31□□□□□ -2.36
USP9X-204ENST00000463829 BBIP1A8MTZ0 92 aa0.3□□□□□ -2.36
USP9X-204ENST00000463829 GYPBP06028 91 aa0.3□□□□□ -2.36
USP9X-204ENST00000463829 G0S2P27469 103 aa0.3□□□□□ -2.36
USP9X-204ENST00000463829 S100A11P31949 105 aa0.3□□□□□ -2.36
USP9X-204ENST00000463829 TMEM78Q5T7P6 136 aa0.3□□□□□ -2.36
USP9X-204ENST00000463829 CCDC32Q9BV29 185 aa0.3□□□□□ -2.36
USP9X-204ENST00000463829 DSPPQ9NZW4 1301 aa0.3□□□□□ -2.36
USP9X-204ENST00000463829 PRORSD1PA6NEY8 169 aa0.29□□□□□ -2.36
USP9X-204ENST00000463829 ARL5CA6NH57 179 aa0.29□□□□□ -2.36
USP9X-204ENST00000463829 SNRPD3P62318 126 aaKnown RBP0.29□□□□□ -2.36
USP9X-204ENST00000463829 STX12Q86Y82 276 aa0.29□□□□□ -2.36
USP9X-204ENST00000463829 TCTEX1D1Q8N7M0 179 aa0.29□□□□□ -2.36
USP9X-204ENST00000463829 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.29□□□□□ -2.36
USP9X-204ENST00000463829 A0A1W2PPB8 328 aa0.28□□□□□ -2.36
USP9X-204ENST00000463829 A0A1W2PRS3 328 aa0.28□□□□□ -2.36
USP9X-204ENST00000463829 KIR3DP1A8MWS1 328 aa0.28□□□□□ -2.36
USP9X-204ENST00000463829 GNG10P50151 68 aa0.28□□□□□ -2.36
USP9X-204ENST00000463829 SPINK13Q1W4C9 94 aa0.28□□□□□ -2.36
USP9X-204ENST00000463829 GLYATL3Q5SZD4 288 aa0.28□□□□□ -2.36
USP9X-204ENST00000463829 PPP1R2P3Q6NXS1 205 aa0.28□□□□□ -2.36
USP9X-204ENST00000463829 C3orf62Q6ZUJ4 267 aa0.28□□□□□ -2.36
USP9X-204ENST00000463829 LINC00305Q7Z4B0 112 aa0.28□□□□□ -2.36
USP9X-204ENST00000463829 TMEM229BQ8NBD8 167 aa0.28□□□□□ -2.36
USP9X-204ENST00000463829 TRPM7Q96QT4 1865 aa0.28□□□□□ -2.36
USP9X-204ENST00000463829 TRBV27A0A0K0K1C4 114 aa0.27□□□□□ -2.37
USP9X-204ENST00000463829 LOC107986453A0A1B0GWG9 222 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms