RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CKS2P33552 79 aa13.11□□□□□ -0.31
ACTB-207ENST00000462494 RPS20P60866 119 aaKnown RBP13.11□□□□□ -0.31
ACTB-207ENST00000462494 NHLH1Q02575 133 aa13.11□□□□□ -0.31
ACTB-207ENST00000462494 LINC01545Q5VT33 79 aa13.11□□□□□ -0.31
ACTB-207ENST00000462494 PIP4P2Q8N4L2 257 aa13.11□□□□□ -0.31
ACTB-207ENST00000462494 CHD8Q9HCK8 2581 aa13.1□□□□□ -0.31
ACTB-207ENST00000462494 VPS13CQ709C8 3753 aa13.1□□□□□ -0.31
ACTB-207ENST00000462494 IGHV3OR16-10A0A075B7F0 116 aa13.1□□□□□ -0.31
ACTB-207ENST00000462494 CCDC140Q96MF4 163 aa13.1□□□□□ -0.31
ACTB-207ENST00000462494 U3KQK5 164 aa13.1□□□□□ -0.31
ACTB-207ENST00000462494 NCOR2Q9Y618 2525 aa13.1□□□□□ -0.31
ACTB-207ENST00000462494 CENPVL3A0A0U1RRI6 287 aa13.09□□□□□ -0.31
ACTB-207ENST00000462494 NPFFO15130 113 aa13.09□□□□□ -0.31
ACTB-207ENST00000462494 MPV17L2Q567V2 206 aa13.09□□□□□ -0.31
ACTB-207ENST00000462494 TMEM219Q86XT9 240 aa13.09□□□□□ -0.31
ACTB-207ENST00000462494 SCRT2Q9NQ03 307 aa13.09□□□□□ -0.31
ACTB-207ENST00000462494 TCF21O43680 179 aa13.09□□□□□ -0.31
ACTB-207ENST00000462494 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.09□□□□□ -0.31
ACTB-207ENST00000462494 MSRB1Q9NZV6 116 aa13.09□□□□□ -0.31
ACTB-207ENST00000462494 A0A096LNJ9 63 aa13.08□□□□□ -0.32
ACTB-207ENST00000462494 FABP5P3A8MUU1 101 aa13.08□□□□□ -0.32
ACTB-207ENST00000462494 FOSL1P15407 271 aa13.08□□□□□ -0.32
ACTB-207ENST00000462494 IL17RELQ6ZVW7 336 aa13.08□□□□□ -0.32
ACTB-207ENST00000462494 EEF1AKMT3Q96AZ1 226 aa13.08□□□□□ -0.32
ACTB-207ENST00000462494 CLPSL1A2RUU4 121 aa13.08□□□□□ -0.32
ACTB-207ENST00000462494 C19orf84I3L1E1 186 aa13.08□□□□□ -0.32
ACTB-207ENST00000462494 NUDT3O95989 172 aa13.08□□□□□ -0.32
ACTB-207ENST00000462494 IGLC6P0CF74 106 aa13.08□□□□□ -0.32
ACTB-207ENST00000462494 PPIFP30405 207 aaKnown RBP13.08□□□□□ -0.32
ACTB-207ENST00000462494 UQCRFS1P47985 274 aa13.08□□□□□ -0.32
ACTB-207ENST00000462494 RAB9AP51151 201 aa13.08□□□□□ -0.32
ACTB-207ENST00000462494 ZNF575Q86XF7 245 aa13.08□□□□□ -0.32
ACTB-207ENST00000462494 NPYP01303 97 aa13.07□□□□□ -0.32
ACTB-207ENST00000462494 ORAOV1Q8WV07 137 aa13.07□□□□□ -0.32
ACTB-207ENST00000462494 MS4A6AQ9H2W1 248 aa13.07□□□□□ -0.32
ACTB-207ENST00000462494 LINC00527Q9UJ94 153 aa13.07□□□□□ -0.32
ACTB-207ENST00000462494 COX11Q9Y6N1 276 aa13.07□□□□□ -0.32
ACTB-207ENST00000462494 A0A087X0K7 114 aa13.07□□□□□ -0.32
ACTB-207ENST00000462494 C5orf56Q8N8D9 126 aa13.06□□□□□ -0.32
ACTB-207ENST00000462494 ZNF738Q8NE65 137 aa13.06□□□□□ -0.32
ACTB-207ENST00000462494 ITLN2Q8WWU7 325 aaPredicted RBP13.06□□□□□ -0.32
ACTB-207ENST00000462494 METTL26Q96S19 204 aa13.06□□□□□ -0.32
ACTB-207ENST00000462494 SLC50A1Q9BRV3 221 aa13.05□□□□□ -0.32
ACTB-207ENST00000462494 TRBV7-1A0A0A6YYK4 115 aa13.05□□□□□ -0.32
ACTB-207ENST00000462494 SNAI2O43623 268 aa13.05□□□□□ -0.32
ACTB-207ENST00000462494 PRSS57Q6UWY2 283 aa13.05□□□□□ -0.32
ACTB-207ENST00000462494 PTTG1IPP53801 180 aa13.04□□□□□ -0.32
ACTB-207ENST00000462494 ATP5G2Q06055 141 aa13.04□□□□□ -0.32
ACTB-207ENST00000462494 CELSR1Q9NYQ6 3014 aa13.04□□□□□ -0.32
ACTB-207ENST00000462494 HBDP02042 147 aa13.04□□□□□ -0.32
ACTB-207ENST00000462494 TCTAP57738 103 aa13.04□□□□□ -0.32
ACTB-207ENST00000462494 AGPAT4-IT1Q9H0P7 198 aa13.04□□□□□ -0.32
ACTB-207ENST00000462494 RBAKDNA6NC62 111 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 GAS8-AS1O95177 125 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 GNLYP22749 145 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 CACNG7P62955 275 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 SRSF2Q01130 221 aaKnown RBP13.03□□□□□ -0.32
ACTB-207ENST00000462494 KLK9Q2XQG4 91 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 BRD3OSQ6XYD6 125 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 ERASQ7Z444 233 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 WFDC3Q8IUB2 231 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 RNF185Q96GF1 192 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 KLK9Q9UKQ9 250 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 TRAV8-2A0A0B4J237 113 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 CCL25O15444 150 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 LINC01559Q495D7 138 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 BVES-AS1Q5T3Y7 98 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 TMEM78Q5T7P6 136 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 C8orf86Q6ZUL3 223 aa13.03□□□□□ -0.32
ACTB-207ENST00000462494 ITPR1Q14643 2758 aa13.02□□□□□ -0.33
ACTB-207ENST00000462494 TRAV41A0A0B4J266 112 aa13.02□□□□□ -0.33
ACTB-207ENST00000462494 IGHV4-39P01824 125 aa13.02□□□□□ -0.33
ACTB-207ENST00000462494 COX8AP10176 69 aa13.01□□□□□ -0.33
ACTB-207ENST00000462494 EVI2AP22794 236 aa13.01□□□□□ -0.33
ACTB-207ENST00000462494 C12orf54Q6X4T0 127 aa13.01□□□□□ -0.33
ACTB-207ENST00000462494 MAP1LC3AQ9H492 121 aa13.01□□□□□ -0.33
ACTB-207ENST00000462494 MOB4Q9Y3A3 225 aa13.01□□□□□ -0.33
ACTB-207ENST00000462494 IGKV3D-20A0A0C4DH25 116 aa13.01□□□□□ -0.33
ACTB-207ENST00000462494 PAX8Q06710 450 aa13.01□□□□□ -0.33
ACTB-207ENST00000462494 TRGV3P03979 118 aa13□□□□□ -0.33
ACTB-207ENST00000462494 HIST1H1AQ02539 215 aaPredicted RBP13□□□□□ -0.33
ACTB-207ENST00000462494 FOXE3Q13461 319 aa13□□□□□ -0.33
ACTB-207ENST00000462494 IFI27L1Q96BM0 104 aa13□□□□□ -0.33
ACTB-207ENST00000462494 PSMG3-AS1Q96PY0 264 aa13□□□□□ -0.33
ACTB-207ENST00000462494 CNFNQ9BYD5 112 aa13□□□□□ -0.33
ACTB-207ENST00000462494 C11orf21Q9P2W6 132 aa13□□□□□ -0.33
ACTB-207ENST00000462494 TRAV40A0A0B4J280 105 aa13□□□□□ -0.33
ACTB-207ENST00000462494 LGALS9BQ3B8N2 356 aa13□□□□□ -0.33
ACTB-207ENST00000462494 ANKRD39Q53RE8 183 aa13□□□□□ -0.33
ACTB-207ENST00000462494 LGALS9CQ6DKI2 356 aa13□□□□□ -0.33
ACTB-207ENST00000462494 C16orf92Q96LL3 132 aa13□□□□□ -0.33
ACTB-207ENST00000462494 C18orf15Q96N68 181 aa13□□□□□ -0.33
ACTB-207ENST00000462494 SPTAN1Q13813 2472 aaKnown RBP12.99□□□□□ -0.33
ACTB-207ENST00000462494 GATA1P15976 413 aaPredicted RBP12.99□□□□□ -0.33
ACTB-207ENST00000462494 UBE2V1Q13404 147 aa12.99□□□□□ -0.33
ACTB-207ENST00000462494 TNFRSF6BO95407 300 aa12.98□□□□□ -0.33
ACTB-207ENST00000462494 PPBPP02775 128 aa12.98□□□□□ -0.33
ACTB-207ENST00000462494 SFTPCP11686 197 aa12.98□□□□□ -0.33
ACTB-207ENST00000462494 Q6ZQT7 251 aa12.98□□□□□ -0.33
ACTB-207ENST00000462494 IGHV1-69DA0A0B4J2H0 117 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms