RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SHISA9B4DS77 424 aa8.04□□□□□ -1.12
CLIP4-208ENST00000456385 ORM1P02763 201 aa8.04□□□□□ -1.12
CLIP4-208ENST00000456385 IGLC6P0CF74 106 aa8.04□□□□□ -1.12
CLIP4-208ENST00000456385 C8orf31Q8N9H6 132 aa8.04□□□□□ -1.12
CLIP4-208ENST00000456385 HIST1H4GQ99525 98 aa8.04□□□□□ -1.12
CLIP4-208ENST00000456385 VSTM5A8MXK1 200 aa8.04□□□□□ -1.12
CLIP4-208ENST00000456385 HLA-DMBP28068 263 aa8.04□□□□□ -1.12
CLIP4-208ENST00000456385 CRYBA4P53673 196 aa8.04□□□□□ -1.12
CLIP4-208ENST00000456385 SCGB2A2Q13296 93 aa8.04□□□□□ -1.12
CLIP4-208ENST00000456385 PLGLAQ15195 96 aa8.04□□□□□ -1.12
CLIP4-208ENST00000456385 C1orf210Q8IVY1 113 aa8.04□□□□□ -1.12
CLIP4-208ENST00000456385 RELNP78509 3460 aa8.04□□□□□ -1.12
CLIP4-208ENST00000456385 IGHV1-3A0A0C4DH29 117 aa8.03□□□□□ -1.12
CLIP4-208ENST00000456385 A0A1B0GWB2 263 aa8.03□□□□□ -1.12
CLIP4-208ENST00000456385 MBD3L4A6NDZ8 208 aaPredicted RBP8.03□□□□□ -1.12
CLIP4-208ENST00000456385 MBD3L3A6NE82 208 aaPredicted RBP8.03□□□□□ -1.12
CLIP4-208ENST00000456385 LINC01546A6NGU7 62 aa8.03□□□□□ -1.12
CLIP4-208ENST00000456385 MBD3L5A6NJ08 208 aaPredicted RBP8.03□□□□□ -1.12
CLIP4-208ENST00000456385 C17orf100A8MU93 164 aa8.03□□□□□ -1.12
CLIP4-208ENST00000456385 TMEM178BH3BS89 294 aa8.03□□□□□ -1.12
CLIP4-208ENST00000456385 CEACAM4O75871 244 aa8.03□□□□□ -1.12
CLIP4-208ENST00000456385 TMEM155Q4W5P6 130 aa8.03□□□□□ -1.12
CLIP4-208ENST00000456385 MBD3L2Q8NHZ7 208 aaPredicted RBP8.03□□□□□ -1.12
CLIP4-208ENST00000456385 IGFBPL1Q8WX77 278 aa8.03□□□□□ -1.12
CLIP4-208ENST00000456385 NDUFA3O95167 84 aa8.03□□□□□ -1.12
CLIP4-208ENST00000456385 CNIH1O95406 144 aa8.03□□□□□ -1.12
CLIP4-208ENST00000456385 THBDP07204 575 aa8.03□□□□□ -1.12
CLIP4-208ENST00000456385 SRSF1Q07955 248 aaKnown RBP eCLIP8.03□□□□□ -1.12
CLIP4-208ENST00000456385 RRN3P1Q2M238 152 aa8.03□□□□□ -1.12
CLIP4-208ENST00000456385 FAM215AQ9Y5M1 114 aa8.03□□□□□ -1.12
CLIP4-208ENST00000456385 APOMO95445 188 aa8.02□□□□□ -1.13
CLIP4-208ENST00000456385 CD59P13987 128 aa8.02□□□□□ -1.13
CLIP4-208ENST00000456385 DTX2Q86UW9 622 aa8.02□□□□□ -1.13
CLIP4-208ENST00000456385 TTC9CQ8N5M4 171 aa8.02□□□□□ -1.13
CLIP4-208ENST00000456385 ZNF502Q8TBZ5 544 aa8.02□□□□□ -1.13
CLIP4-208ENST00000456385 NXT2Q9NPJ8 142 aaKnown RBP8.02□□□□□ -1.13
CLIP4-208ENST00000456385 TRAV26-2A0A0B4J265 109 aa8.02□□□□□ -1.13
CLIP4-208ENST00000456385 TRAV17A0A0B4J275 112 aa8.02□□□□□ -1.13
CLIP4-208ENST00000456385 TNFRSF13BO14836 293 aaPredicted RBP8.02□□□□□ -1.13
CLIP4-208ENST00000456385 ADIPOQQ15848 244 aa8.02□□□□□ -1.13
CLIP4-208ENST00000456385 TCTEX1D4Q5JR98 221 aa8.02□□□□□ -1.13
CLIP4-208ENST00000456385 SFTA2Q6UW10 78 aa8.02□□□□□ -1.13
CLIP4-208ENST00000456385 SYT8Q8NBV8 401 aa8.02□□□□□ -1.13
CLIP4-208ENST00000456385 PSMG3-AS1Q96PY0 264 aa8.02□□□□□ -1.13
CLIP4-208ENST00000456385 GEMIN7Q9H840 131 aaKnown RBP8.02□□□□□ -1.13
CLIP4-208ENST00000456385 IGLV2-18A0A075B6J9 118 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 IGHV3OR16-8A0A075B7F1 116 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 ATP5LO75964 103 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 IGHV3-23P01764 117 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 IGHG4P01861 327 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 TRGV3P03979 118 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 EFNA4P52798 201 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 FHL3Q13643 280 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 PDE6HQ13956 83 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 PSMG4Q5JS54 123 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 MRAP2Q96G30 205 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 CDIP1Q9H305 208 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 TRBV7-3A0A075B6L6 115 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 BUB1B-PAK6H3BSN5 160 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 IGLV1-47P01700 117 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 COX7A1P24310 79 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 SMCPP49901 116 aaPredicted RBP8.01□□□□□ -1.13
CLIP4-208ENST00000456385 FOXI1Q12951 378 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 ERCC8Q13216 396 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 MORN3Q6PF18 240 aaPredicted RBP8.01□□□□□ -1.13
CLIP4-208ENST00000456385 GFRALQ6UXV0 394 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 COX8CQ7Z4L0 72 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 NFE4Q86UQ8 179 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 DCHS2Q6V1P9 2916 aa8.01□□□□□ -1.13
CLIP4-208ENST00000456385 ZNF883P0CG24 379 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 Q8N8P6 123 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 GLMPQ8WWB7 406 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 CNFNQ9BYD5 112 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 CYSLTR1Q9Y271 337 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 LRBAP50851 2863 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 LINC01548A6NM66 108 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 MT-ATP8P03928 68 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 HLA-DRB4P13762 266 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 TAL2Q16559 108 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 C3orf36Q3SXR2 165 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 C8orf86Q6ZUL3 223 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 MYOZ3Q8TDC0 251 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 MRPL16Q9NX20 251 aaKnown RBP8□□□□□ -1.13
CLIP4-208ENST00000456385 HLA-DRB4X5D2U9 266 aa8□□□□□ -1.13
CLIP4-208ENST00000456385 A0A087WX48 190 aa7.99□□□□□ -1.13
CLIP4-208ENST00000456385 TMEM238LA0A1B0GVL6 79 aa7.99□□□□□ -1.13
CLIP4-208ENST00000456385 NCBP2LA6PVI3 153 aaKnown RBP7.99□□□□□ -1.13
CLIP4-208ENST00000456385 CDX4O14627 284 aaPredicted RBP7.99□□□□□ -1.13
CLIP4-208ENST00000456385 SPINK8P0C7L1 97 aa7.99□□□□□ -1.13
CLIP4-208ENST00000456385 NUP37Q8NFH4 326 aa7.99□□□□□ -1.13
CLIP4-208ENST00000456385 PTH2Q96A98 100 aa7.99□□□□□ -1.13
CLIP4-208ENST00000456385 RPEQ96AT9 228 aa7.99□□□□□ -1.13
CLIP4-208ENST00000456385 PGPEP1Q9NXJ5 209 aa7.99□□□□□ -1.13
CLIP4-208ENST00000456385 SMAD5-AS1Q9Y6J3 95 aa7.99□□□□□ -1.13
CLIP4-208ENST00000456385 IGHV3-35A0A0C4DH35 117 aa7.98□□□□□ -1.13
CLIP4-208ENST00000456385 PRAC2D3DTV9 90 aa7.98□□□□□ -1.13
CLIP4-208ENST00000456385 IGFL2Q6UWQ7 119 aa7.98□□□□□ -1.13
CLIP4-208ENST00000456385 DYNAPQ8N1N2 210 aa7.98□□□□□ -1.13
CLIP4-208ENST00000456385 TMEM190Q8WZ59 177 aa7.98□□□□□ -1.13
CLIP4-208ENST00000456385 SH3BGRL2Q9UJC5 107 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms