RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 TRAV41A0A0B4J266 112 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 A8MWL6 223 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 K7EQM0 130 aa13.04□□□□□ -0.32
LAPTM4B-201ENST00000445593 MT-ND6P03923 174 aa13.03□□□□□ -0.32
LAPTM4B-201ENST00000445593 RPL7P18124 248 aaKnown RBP13.03□□□□□ -0.32
LAPTM4B-201ENST00000445593 CSN1S1P47710 185 aa13.03□□□□□ -0.32
LAPTM4B-201ENST00000445593 TPPP2P59282 170 aa13.03□□□□□ -0.32
LAPTM4B-201ENST00000445593 PSG3Q16557 428 aa13.03□□□□□ -0.32
LAPTM4B-201ENST00000445593 VGLL1Q99990 258 aa13.03□□□□□ -0.32
LAPTM4B-201ENST00000445593 C19orf71A6NCJ1 209 aa13.02□□□□□ -0.32
LAPTM4B-201ENST00000445593 KRTAP10-9P60411 292 aa13.02□□□□□ -0.32
LAPTM4B-201ENST00000445593 ERCC8Q13216 396 aa13.02□□□□□ -0.32
LAPTM4B-201ENST00000445593 ACANP16112 2415 aa13.02□□□□□ -0.33
LAPTM4B-201ENST00000445593 TRBV9A0A0B4J1U6 114 aa13.02□□□□□ -0.33
LAPTM4B-201ENST00000445593 SCGB2A1O75556 95 aa13.02□□□□□ -0.33
LAPTM4B-201ENST00000445593 PRRC2AP48634 2157 aaKnown RBP13.02□□□□□ -0.33
LAPTM4B-201ENST00000445593 SORL1Q92673 2214 aa13.02□□□□□ -0.33
LAPTM4B-201ENST00000445593 CHEK1O14757 476 aa13.02□□□□□ -0.33
LAPTM4B-201ENST00000445593 CRIP1P50238 77 aa13.02□□□□□ -0.33
LAPTM4B-201ENST00000445593 SIGLECL1Q8N7X8 197 aa13.02□□□□□ -0.33
LAPTM4B-201ENST00000445593 PF4V1P10720 104 aa13.01□□□□□ -0.33
LAPTM4B-201ENST00000445593 PMCHL1Q16048 86 aa13.01□□□□□ -0.33
LAPTM4B-201ENST00000445593 RNASEKQ6P5S7 137 aaKnown RBP13.01□□□□□ -0.33
LAPTM4B-201ENST00000445593 TMEM75Q8N9X5 138 aa13.01□□□□□ -0.33
LAPTM4B-201ENST00000445593 PRAC2D3DTV9 90 aa13.01□□□□□ -0.33
LAPTM4B-201ENST00000445593 K7EP13 123 aa13.01□□□□□ -0.33
LAPTM4B-201ENST00000445593 ATP5G2Q06055 141 aa13.01□□□□□ -0.33
LAPTM4B-201ENST00000445593 EEF1AKMT3Q96AZ1 226 aa13.01□□□□□ -0.33
LAPTM4B-201ENST00000445593 KLK15Q9H2R5 256 aa13.01□□□□□ -0.33
LAPTM4B-201ENST00000445593 LAMTOR2Q9Y2Q5 125 aa13.01□□□□□ -0.33
LAPTM4B-201ENST00000445593 CT45A10P0DMU9 189 aa13□□□□□ -0.33
LAPTM4B-201ENST00000445593 COX6B1P14854 86 aa13□□□□□ -0.33
LAPTM4B-201ENST00000445593 HBBP68871 147 aa13□□□□□ -0.33
LAPTM4B-201ENST00000445593 PRSS22Q9GZN4 317 aa13□□□□□ -0.33
LAPTM4B-201ENST00000445593 TGFAP01135 160 aa13□□□□□ -0.33
LAPTM4B-201ENST00000445593 ARMS2P0C7Q2 107 aa13□□□□□ -0.33
LAPTM4B-201ENST00000445593 PPBPP02775 128 aa13□□□□□ -0.33
LAPTM4B-201ENST00000445593 CSN3P07498 182 aa13□□□□□ -0.33
LAPTM4B-201ENST00000445593 SRSF1Q07955 248 aaKnown RBP eCLIP13□□□□□ -0.33
LAPTM4B-201ENST00000445593 ZNF843Q8N446 348 aa13□□□□□ -0.33
LAPTM4B-201ENST00000445593 C18orf32Q8TCD1 76 aa13□□□□□ -0.33
LAPTM4B-201ENST00000445593 NOTCH2Q04721 2471 aa12.99□□□□□ -0.33
LAPTM4B-201ENST00000445593 A0A1W2PS18 150 aa12.99□□□□□ -0.33
LAPTM4B-201ENST00000445593 J3KRW8 73 aa12.99□□□□□ -0.33
LAPTM4B-201ENST00000445593 ZNF138P52744 262 aa12.99□□□□□ -0.33
LAPTM4B-201ENST00000445593 SMAGPQ0VAQ4 97 aa12.99□□□□□ -0.33
LAPTM4B-201ENST00000445593 ZFAND3Q9H8U3 227 aa12.99□□□□□ -0.33
LAPTM4B-201ENST00000445593 APCP25054 2843 aa12.99□□□□□ -0.33
LAPTM4B-201ENST00000445593 RBPMS2Q6ZRY4 209 aaKnown RBP12.99□□□□□ -0.33
LAPTM4B-201ENST00000445593 RNF223E7ERA6 249 aa12.98□□□□□ -0.33
LAPTM4B-201ENST00000445593 ZNF48Q96MX3 618 aaPredicted RBP12.98□□□□□ -0.33
LAPTM4B-201ENST00000445593 MTORP42345 2549 aa12.98□□□□□ -0.33
LAPTM4B-201ENST00000445593 DEFB1P60022 68 aa12.98□□□□□ -0.33
LAPTM4B-201ENST00000445593 SPATA45Q537H7 98 aa12.98□□□□□ -0.33
LAPTM4B-201ENST00000445593 COX11Q9Y6N1 276 aa12.98□□□□□ -0.33
LAPTM4B-201ENST00000445593 RPL11P62913 178 aaKnown RBP12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 UNQ9165/PRO28630Q6UXU0 137 aa12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 CLPSL1A2RUU4 121 aa12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 B4DSR2 109 aa12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 BUB3O43684 328 aa12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 Q0VG73 95 aa12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 OR1N2Q8NGR9 330 aa12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 ZNF492Q9P255 531 aa12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 ARL3P36405 182 aa12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 LCN12Q6JVE5 192 aa12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 KCNS1Q96KK3 526 aa12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 DUX5Q96PT3 197 aa12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 GTSF1LQ9H1H1 148 aa12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 ZNF469Q96JG9 3925 aaPredicted RBP12.97□□□□□ -0.33
LAPTM4B-201ENST00000445593 IGHV4-59P01825 116 aa12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 PPIFP30405 207 aaKnown RBP12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 ZNF80P51504 273 aaPredicted RBP12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 PSG9Q00887 426 aa12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 ORAOV1Q8WV07 137 aa12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 NRN1Q9NPD7 142 aa12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 SERTM2A0A1B0GWG4 89 aa12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 HSBP1O75506 76 aa12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 IGHG4P01861 327 aa12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 GPX1P07203 203 aa12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 HIST2H2BCQ6DN03 193 aa12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 C10orf99Q6UWK7 81 aa12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 LYPD1Q8N2G4 141 aa12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 METTL26Q96S19 204 aa12.96□□□□□ -0.33
LAPTM4B-201ENST00000445593 A0A1B0GXF2 115 aa12.95□□□□□ -0.34
LAPTM4B-201ENST00000445593 SH2D1AO60880 128 aa12.95□□□□□ -0.34
LAPTM4B-201ENST00000445593 PDE6HQ13956 83 aa12.95□□□□□ -0.34
LAPTM4B-201ENST00000445593 AMMECR1LQ6DCA0 310 aa12.95□□□□□ -0.34
LAPTM4B-201ENST00000445593 K7ERU9 68 aa12.95□□□□□ -0.34
LAPTM4B-201ENST00000445593 HELZ2Q9BYK8 2649 aaKnown RBP12.95□□□□□ -0.34
LAPTM4B-201ENST00000445593 SRD5A1P18405 259 aa12.95□□□□□ -0.34
LAPTM4B-201ENST00000445593 SCGB2A2Q13296 93 aa12.95□□□□□ -0.34
LAPTM4B-201ENST00000445593 COX19Q49B96 90 aa12.95□□□□□ -0.34
LAPTM4B-201ENST00000445593 SMIM12Q96EX1 92 aa12.95□□□□□ -0.34
LAPTM4B-201ENST00000445593 FLNAP21333 2647 aaKnown RBP12.94□□□□□ -0.34
LAPTM4B-201ENST00000445593 ZNF324O75467 553 aaPredicted RBP12.94□□□□□ -0.34
LAPTM4B-201ENST00000445593 DEFB112Q30KQ8 113 aa12.94□□□□□ -0.34
LAPTM4B-201ENST00000445593 NAA38Q9BRA0 125 aaKnown RBP12.94□□□□□ -0.34
LAPTM4B-201ENST00000445593 TMEM213A2RRL7 107 aa12.94□□□□□ -0.34
LAPTM4B-201ENST00000445593 ORM1P02763 201 aa12.94□□□□□ -0.34
LAPTM4B-201ENST00000445593 PAFAH1B2P68402 229 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms