RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 A0A1W2PPB8 328 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 TCRBV4S1A1TA0A5B7 111 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 PSMB11A5LHX3 300 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 C19orf71A6NCJ1 209 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 OR2T8A6NH00 312 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 FBLL1A6NHQ2 334 aaKnown RBP1.93□□□□□ -2.1
VPS41-206ENST00000418457 A8MU10 97 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 HIGD1CA8MV81 97 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 KIR3DP1A8MWS1 328 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 G3V4G9 280 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 KLRC4-KLRK1H3BQV0 150 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 K7EQM0 130 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 UPK2O00526 184 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 TIMM8AO60220 97 aaPredicted RBP1.93□□□□□ -2.1
VPS41-206ENST00000418457 SPINK4O60575 86 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 FOXH1O75593 365 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 DUSP14O95147 198 aaKnown RBP1.93□□□□□ -2.1
VPS41-206ENST00000418457 P01737 135 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 APOA2P02652 100 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 SAA2P0DJI9 122 aaPredicted RBP1.93□□□□□ -2.1
VPS41-206ENST00000418457 IGHV3-43DP0DP04 118 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 RNASE2P10153 161 aaKnown RBP1.93□□□□□ -2.1
VPS41-206ENST00000418457 HLA-DRB4P13762 266 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 PRDX2P32119 198 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 MPV17P39210 176 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 MYCNOSP40205 109 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 GPR6P46095 362 aaPredicted RBP1.93□□□□□ -2.1
VPS41-206ENST00000418457 CXCL12P48061 93 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 FOXA3P55318 350 aaPredicted RBP1.93□□□□□ -2.1
VPS41-206ENST00000418457 RPL8P62917 257 aaKnown RBP1.93□□□□□ -2.1
VPS41-206ENST00000418457 SLC35B1P78383 322 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 LGALS9BQ3B8N2 356 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 PRR30Q53SZ7 412 aaPredicted RBP1.93□□□□□ -2.1
VPS41-206ENST00000418457 SPINK9Q5DT21 86 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 FAM120AOSQ5T036 256 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 LGALS9CQ6DKI2 356 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 LCN12Q6JVE5 192 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 UFSP1Q6NVU6 142 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 SLC25A48Q6ZT89 311 aaKnown RBP1.93□□□□□ -2.1
VPS41-206ENST00000418457 FA2HQ7L5A8 372 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 SSX8Q7RTT4 187 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 ATOH7Q8N100 152 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 RPRMLQ8N4K4 120 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 TMEM251Q8N6I4 163 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 FER1L6-AS1Q8NA97 138 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 OR10X1Q8NGY0 326 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 UBALD1Q8TB05 177 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 PIFOQ8TCI5 191 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 KLF14Q8TD94 323 aaPredicted RBP1.93□□□□□ -2.1
VPS41-206ENST00000418457 LRRC29Q8WV35 223 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 FAM167A-AS1Q96KT0 104 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 TPPP3Q9BW30 176 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 SLC25A2Q9BXI2 301 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 TTTY12Q9BZ98 90 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 LINC00574Q9H8X3 128 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 ZNF355PQ9NSJ1 428 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 CALYQ9NYX4 217 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 SIGLEC8Q9NYZ4 499 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 HLA-DRB4X5D2U9 266 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 ZNF407Q9C0G0 2248 aa1.93□□□□□ -2.1
VPS41-206ENST00000418457 CACNA1EQ15878 2313 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 MED12Q93074 2177 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 CFAP47Q6ZTR5 3102 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 IGKV1D-17A0A075B6S4 117 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 TRGV5A0A0B4J1U4 118 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 TRAV3A0A0B4J244 114 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 KBTBD11-OT1A0A1B0GTJ5 212 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 A0A1B0GUT8 65 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 A0A1W2PPM0 123 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 TMEM189A5PLL7 270 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 PINLYPA6NC86 204 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 DEFB108AA8MXU0 73 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 F8WDY8 70 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 H3BTX0 84 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 LY6G6DO95868 133 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 LTAP01374 205 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 TCRAP04437 139 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 SLC25A5P05141 298 aaKnown RBP1.92□□□□□ -2.1
VPS41-206ENST00000418457 KRTAP1-4P0C5Y4 121 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 DNAH10OSP0CZ25 163 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 CGB3P0DN86 165 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 CGB7P0DN87 165 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 FABP2P12104 132 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 MAGEA5P43359 124 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 CEBPDP49716 269 aaPredicted RBP1.92□□□□□ -2.1
VPS41-206ENST00000418457 PLP1P60201 277 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 MEF2CQ06413 473 aaPredicted RBP1.92□□□□□ -2.1
VPS41-206ENST00000418457 EDDM3AQ14507 147 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 PLGLAQ15195 96 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 TAL2Q16559 108 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 RPL39P5Q59GN2 51 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 TIMM23BQ5SRD1 257 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 GDF5OSQ5U4N7 250 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 SAMD13Q5VXD3 122 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
VPS41-206ENST00000418457 ZNF562Q6V9R5 426 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 ZNF493Q6ZR52 646 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 Q6ZT83 130 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 NEGR1Q7Z3B1 354 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 ERASQ7Z444 233 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms