RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 RAB5CP51148 216 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 NDUFA6P56556 154 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 QRFPP83859 136 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 PATE2Q6UY27 113 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 Q6ZSA8 131 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 OR5A2Q8NGI9 324 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 BRK1Q8WUW1 75 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 TP53RKQ96S44 253 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 TAF9BQ9HBM6 251 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 LY96Q9Y6Y9 160 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 ARHGAP31Q2M1Z3 1444 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 FAM135BQ49AJ0 1406 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 CACNA1AO00555 2505 aa1.71□□□□□ -2.14
HMGB3P31-201ENST00000413333 TRAV13-1A0A0B4J241 112 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 ZNF727A8MUV8 499 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 FAM25AB3EWG3 89 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 FAM25CB3EWG5 89 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 FAM25GB3EWG6 89 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 H3BMG7 143 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 KDM6AO15550 1401 aaPredicted RBP1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 SYNJ1O43426 1573 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 GNG7O60262 68 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 PAEPP09466 180 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 KDM5CP41229 1560 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 NEDD8Q15843 81 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 C1orf137Q5JT78 98 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 MYOM3Q5VTT5 1437 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 C4orf22Q6V702 233 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 TEX29Q8N6K0 151 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 C10orf105Q8TEF2 133 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 MAGOHBQ96A72 148 aaKnown RBP1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 AP1S3Q96PC3 154 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 RETNLBQ9BQ08 111 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 TNFSF18Q9UNG2 199 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 IBTKQ9P2D0 1353 aaPredicted RBP1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 TMEM2Q9UHN6 1383 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 MYH1P12882 1939 aa1.7□□□□□ -2.14
HMGB3P31-201ENST00000413333 ZNF25P17030 456 aaPredicted RBP1.69□□□□□ -2.14
HMGB3P31-201ENST00000413333 CRYGSP22914 178 aa1.69□□□□□ -2.14
HMGB3P31-201ENST00000413333 DIAPH2-AS1Q14236 149 aa1.69□□□□□ -2.14
HMGB3P31-201ENST00000413333 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
HMGB3P31-201ENST00000413333 TEX261Q6UWH6 196 aa1.69□□□□□ -2.14
HMGB3P31-201ENST00000413333 CTAGE3PQ8IX95 158 aa1.69□□□□□ -2.14
HMGB3P31-201ENST00000413333 MORN4Q8NDC4 146 aa1.69□□□□□ -2.14
HMGB3P31-201ENST00000413333 OR5D16Q8NGK9 328 aa1.69□□□□□ -2.14
HMGB3P31-201ENST00000413333 DIRC1Q969H9 104 aa1.69□□□□□ -2.14
HMGB3P31-201ENST00000413333 PKD1L2Q7Z442 2459 aa1.69□□□□□ -2.14
HMGB3P31-201ENST00000413333 LAMB2P55268 1798 aa1.69□□□□□ -2.14
HMGB3P31-201ENST00000413333 MBD5Q9P267 1494 aa1.69□□□□□ -2.14
HMGB3P31-201ENST00000413333 EXPH5Q8NEV8 1989 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 CNTLNQ9NXG0 1405 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 CITO14578 2027 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 DLC1Q96QB1 1528 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 FAM92AA1XBS5 289 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 J3QR89 54 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 NPFFO15130 113 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 TCRAP04437 139 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 IFNA4P05014 189 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 SMIM6P0DI80 62 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 LYNX1P0DP58 116 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 IL9P15248 144 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 AKR1D1P51857 326 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 FOXA3P55318 350 aaPredicted RBP1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 COPZ1P61923 177 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 OCIAD2Q56VL3 154 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 MMGT1Q8N4V1 131 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 OR5D14Q8NGL3 314 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 OR5H6Q8NGV6 325 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 PRELID3AQ96N28 172 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 MCEEQ96PE7 176 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 TCEAL7Q9BRU2 100 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 COA4Q9NYJ1 87 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 KIF13AQ9H1H9 1805 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 MYLKQ15746 1914 aa1.68□□□□□ -2.14
HMGB3P31-201ENST00000413333 KIAA1107Q9UPP5 1409 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 MUC4Q99102 2169 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 TCRBV4S1A1TA0A5B7 111 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 B4DSR2 109 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 ZNF736B4DX44 427 aaPredicted RBP1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 ZNF670-ZNF695F2Z2N8 137 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 RER1O15258 196 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 CD2P06729 351 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 ROMO1P60602 79 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 MAXP61244 160 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 CNBPP62633 177 aaKnown RBP1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 KLRD1Q13241 179 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 HSD17B12Q53GQ0 312 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 GLIPR1L1Q6UWM5 242 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 OR10AC1Q8NH08 325 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 POP5Q969H6 163 aaKnown RBP1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 CHCHD1Q96BP2 118 aaKnown RBP1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 C14orf144Q96I85 54 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 BANF2Q9H503 90 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 NIT2Q9NQR4 276 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 CDC42SE1Q9NRR8 79 aa1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 COL1A1P02452 1464 aaPredicted RBP1.67□□□□□ -2.14
HMGB3P31-201ENST00000413333 VPS8Q8N3P4 1428 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 PRRC2BQ5JSZ5 2229 aaKnown RBP1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 TRAV27A0A087WT01 109 aa1.66□□□□□ -2.14
HMGB3P31-201ENST00000413333 FAM236AA0A1B0GUQ0 79 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms