RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 LINC00479Q96M42 142 aa7.35□□□□□ -1.23
TRPM1-202ENST00000397795 TRGV1A0A0A0MS02 117 aa7.35□□□□□ -1.23
TRPM1-202ENST00000397795 K7EMI3 77 aa7.35□□□□□ -1.23
TRPM1-202ENST00000397795 UPK3BQ9BT76 320 aa7.35□□□□□ -1.23
TRPM1-202ENST00000397795 C2orf70A6NJV1 201 aa7.34□□□□□ -1.23
TRPM1-202ENST00000397795 NDUFS7O75251 213 aa7.34□□□□□ -1.23
TRPM1-202ENST00000397795 CFHR4Q92496 578 aa7.34□□□□□ -1.23
TRPM1-202ENST00000397795 PAX8Q06710 450 aa7.34□□□□□ -1.23
TRPM1-202ENST00000397795 MRPL51Q4U2R6 128 aaKnown RBP7.34□□□□□ -1.23
TRPM1-202ENST00000397795 MDS2Q8NDY4 140 aa7.34□□□□□ -1.23
TRPM1-202ENST00000397795 MT-ATP8P03928 68 aa7.34□□□□□ -1.23
TRPM1-202ENST00000397795 MRPS36P82909 103 aaKnown RBP7.34□□□□□ -1.23
TRPM1-202ENST00000397795 HIST2H2BCQ6DN03 193 aa7.34□□□□□ -1.23
TRPM1-202ENST00000397795 HIST2H2BDQ6DRA6 164 aa7.34□□□□□ -1.23
TRPM1-202ENST00000397795 SLC25A45Q8N413 288 aa7.34□□□□□ -1.23
TRPM1-202ENST00000397795 TTTY12Q9BZ98 90 aa7.34□□□□□ -1.23
TRPM1-202ENST00000397795 ZNF576Q9H609 170 aa7.34□□□□□ -1.23
TRPM1-202ENST00000397795 PLXNA3P51805 1871 aa7.34□□□□□ -1.24
TRPM1-202ENST00000397795 ATG2BQ96BY7 2078 aa7.34□□□□□ -1.24
TRPM1-202ENST00000397795 SHANK1Q9Y566 2161 aa7.34□□□□□ -1.24
TRPM1-202ENST00000397795 TRBV25-1A0A075B6N4 114 aa7.34□□□□□ -1.24
TRPM1-202ENST00000397795 NDPQ00604 133 aa7.34□□□□□ -1.24
TRPM1-202ENST00000397795 SERTAD4-AS1Q5TG53 156 aa7.34□□□□□ -1.24
TRPM1-202ENST00000397795 DYNAPQ8N1N2 210 aa7.34□□□□□ -1.24
TRPM1-202ENST00000397795 RNF138Q8WVD3 245 aa7.34□□□□□ -1.24
TRPM1-202ENST00000397795 TM4SF4P48230 202 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 FOXE3Q13461 319 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 MLST8Q9BVC4 326 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 TGFBR3LH3BV60 316 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 C3orf36Q3SXR2 165 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 A0A087WWL8 130 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 TMEM213A2RRL7 107 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 C21orf140B9A014 251 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 PSCAO43653 123 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 NXPH4O95158 308 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 RHOHQ15669 191 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 C20orf78Q9BR46 151 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 SRXN1Q9BYN0 137 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 IGKV1-27A0A075B6S5 117 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 HRCT1Q6UXD1 115 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 DEFB104AQ8WTQ1 72 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 ZNF747Q9BV97 191 aa7.33□□□□□ -1.24
TRPM1-202ENST00000397795 TRAV23DV6A0A075B6W5 121 aa7.32□□□□□ -1.24
TRPM1-202ENST00000397795 OPRPNQ99935 248 aaPredicted RBP7.32□□□□□ -1.24
TRPM1-202ENST00000397795 C15orf62A8K5M9 175 aa7.32□□□□□ -1.24
TRPM1-202ENST00000397795 NRXN2Q9P2S2 1712 aa7.32□□□□□ -1.24
TRPM1-202ENST00000397795 PSG7Q13046 419 aa7.32□□□□□ -1.24
TRPM1-202ENST00000397795 RSPO4Q2I0M5 234 aaPredicted RBP7.32□□□□□ -1.24
TRPM1-202ENST00000397795 ZNF497Q6ZNH5 498 aa7.32□□□□□ -1.24
TRPM1-202ENST00000397795 FAM110AQ9BQ89 295 aa7.32□□□□□ -1.24
TRPM1-202ENST00000397795 SPAARA0A1B0GVQ0 90 aa7.32□□□□□ -1.24
TRPM1-202ENST00000397795 UFSP1Q6NVU6 142 aa7.32□□□□□ -1.24
TRPM1-202ENST00000397795 UNC13CQ8NB66 2214 aa7.32□□□□□ -1.24
TRPM1-202ENST00000397795 HIGD2BQ4VC39 106 aa7.32□□□□□ -1.24
TRPM1-202ENST00000397795 PCP2Q8IVA1 136 aa7.32□□□□□ -1.24
TRPM1-202ENST00000397795 Q8N976 141 aa7.32□□□□□ -1.24
TRPM1-202ENST00000397795 CABIN1Q9Y6J0 2220 aa7.32□□□□□ -1.24
TRPM1-202ENST00000397795 TRBV6-6A0A0A6YYG2 114 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 CECR9P0C854 216 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 IGLC6P0CF74 106 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 LILRA6Q6PI73 481 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 TMEM61Q8N0U2 210 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 FANCMQ8IYD8 2048 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 NTF4P34130 210 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 Q8TAT8 98 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 FANCD2OSQ96PS1 177 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 SDHAF1A6NFY7 115 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 LGALS9O00182 355 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 NRN1LQ496H8 165 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 SERP2Q8N6R1 65 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 ESPL1Q14674 2120 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 IGHV4-28A0A0C4DH34 117 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 UCNP55089 124 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 UBE2DNLQ8IWF7 75 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 RNF114Q9Y508 228 aa7.31□□□□□ -1.24
TRPM1-202ENST00000397795 TEX22C9J3V5 150 aa7.3□□□□□ -1.24
TRPM1-202ENST00000397795 USP17L23D6RBM5 183 aa7.3□□□□□ -1.24
TRPM1-202ENST00000397795 IGHV3-11P01762 117 aa7.3□□□□□ -1.24
TRPM1-202ENST00000397795 TMEM196Q5HYL7 178 aa7.3□□□□□ -1.24
TRPM1-202ENST00000397795 IMUPQ9GZP8 106 aa7.3□□□□□ -1.24
TRPM1-202ENST00000397795 TNRC6AQ8NDV7 1962 aaKnown RBP7.3□□□□□ -1.24
TRPM1-202ENST00000397795 LINC00310P59036 64 aa7.3□□□□□ -1.24
TRPM1-202ENST00000397795 SMRP1Q8NCR6 262 aa7.3□□□□□ -1.24
TRPM1-202ENST00000397795 ZCCHC24Q8N2G6 241 aaKnown RBP7.3□□□□□ -1.24
TRPM1-202ENST00000397795 COX7B2Q8TF08 81 aa7.3□□□□□ -1.24
TRPM1-202ENST00000397795 IGKV1-39P01597 117 aa7.3□□□□□ -1.24
TRPM1-202ENST00000397795 IGKV1D-39P04432 117 aa7.3□□□□□ -1.24
TRPM1-202ENST00000397795 FRMD6-AS1P0C7T7 363 aa7.3□□□□□ -1.24
TRPM1-202ENST00000397795 LINC00173Q6ZV60 143 aa7.3□□□□□ -1.24
TRPM1-202ENST00000397795 TMEM256-PLSCR3K7ERE1 68 aa7.29□□□□□ -1.24
TRPM1-202ENST00000397795 WISP1O95388 367 aa7.29□□□□□ -1.24
TRPM1-202ENST00000397795 C5orf63A6NC05 138 aa7.29□□□□□ -1.24
TRPM1-202ENST00000397795 CASC2Q6XLA1 102 aa7.29□□□□□ -1.24
TRPM1-202ENST00000397795 HOXB4P17483 251 aaPredicted RBP7.29□□□□□ -1.24
TRPM1-202ENST00000397795 SERP1Q9Y6X1 66 aa7.29□□□□□ -1.24
TRPM1-202ENST00000397795 BRWD1Q9NSI6 2320 aa7.29□□□□□ -1.24
TRPM1-202ENST00000397795 DEFB105AQ8NG35 78 aa7.29□□□□□ -1.24
TRPM1-202ENST00000397795 PLXND1Q9Y4D7 1925 aa7.28□□□□□ -1.24
TRPM1-202ENST00000397795 IGKV1-6A0A0C4DH72 117 aa7.28□□□□□ -1.24
TRPM1-202ENST00000397795 SHISA2Q6UWI4 295 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms