RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 CCDC144NLQ6NUI1 221 aa9.48□□□□□ -0.89
CAPRIN1-202ENST00000389645 DEFB104AQ8WTQ1 72 aa9.48□□□□□ -0.89
CAPRIN1-202ENST00000389645 TMEM189A5PLL7 270 aa9.48□□□□□ -0.89
CAPRIN1-202ENST00000389645 FOXE3Q13461 319 aa9.48□□□□□ -0.89
CAPRIN1-202ENST00000389645 ZNF843Q8N446 348 aa9.48□□□□□ -0.89
CAPRIN1-202ENST00000389645 LY6G5BQ8NDX9 201 aa9.48□□□□□ -0.89
CAPRIN1-202ENST00000389645 SRSF8Q9BRL6 282 aaKnown RBP9.48□□□□□ -0.89
CAPRIN1-202ENST00000389645 PRTN3P24158 256 aa9.48□□□□□ -0.89
CAPRIN1-202ENST00000389645 TMEM219Q86XT9 240 aa9.48□□□□□ -0.89
CAPRIN1-202ENST00000389645 MYO9AB2RTY4 2548 aa9.48□□□□□ -0.89
CAPRIN1-202ENST00000389645 SCGB2A1O75556 95 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 RPL11P62913 178 aaKnown RBP9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 PVRIGQ6DKI7 326 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 ATP5L2Q7Z4Y8 100 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 MLST8Q9BVC4 326 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 MRPL27Q9P0M9 148 aaKnown RBP9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 IGHV4-39P01824 125 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 TWIST1Q15672 202 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 FAM120AOSQ5T036 256 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 MAP1LC3CQ9BXW4 147 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 KLF12Q9Y4X4 402 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 NACAE9PAV3 2078 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 TMEM213A2RRL7 107 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 CLEC3BP05452 202 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 CLEC19AQ6UXS0 136 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 TMEM75Q8N9X5 138 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 AP5S1Q9NUS5 200 aa9.47□□□□□ -0.89
CAPRIN1-202ENST00000389645 FAM231BA6NCW3 169 aa9.46□□□□□ -0.89
CAPRIN1-202ENST00000389645 G3V318 75 aa9.46□□□□□ -0.89
CAPRIN1-202ENST00000389645 C15orf32Q32M92 178 aa9.46□□□□□ -0.89
CAPRIN1-202ENST00000389645 RASL11AQ6T310 242 aa9.46□□□□□ -0.89
CAPRIN1-202ENST00000389645 RABAC1Q9UI14 185 aa9.46□□□□□ -0.89
CAPRIN1-202ENST00000389645 ANKRD17O75179 2603 aaKnown RBP9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 A0A1B0GV72 72 aa9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 SMKR1H3BMG3 65 aa9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 FAM106CPP0CH98 169 aa9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 CKS1BP61024 79 aa9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 PSG3Q16557 428 aa9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 SHISA2Q6UWI4 295 aa9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 SIGLEC15Q6ZMC9 328 aa9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 IGHV1-24A0A0C4DH33 117 aa9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 RPL7P18124 248 aaKnown RBP9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 PLP1P60201 277 aa9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 RHOGP84095 191 aa9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 LYZL1Q6UWQ5 148 aa9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 ZNF562Q6V9R5 426 aa9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 AP1S3Q96PC3 154 aa9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 MRPS16Q9Y3D3 137 aaKnown RBP9.46□□□□□ -0.9
CAPRIN1-202ENST00000389645 TRAV9-2A0A087WT02 112 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 H3BRN7 92 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 H3BUT2 72 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 NCR2O95944 276 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 OR5AL1P0C617 328 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 SRSF1Q07955 248 aaKnown RBP eCLIP9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 PRSS57Q6UWY2 283 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 AMN1Q8IY45 258 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 WIPF2Q8TF74 440 aaPredicted RBP9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 ZNF414Q96IQ9 312 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 TMEM191AQ9H0A3 160 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 C7orf69Q9H7B7 122 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 SS18L2Q9UHA2 77 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 TENM4Q6N022 2769 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 G3V4G9 280 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 FAM162BQ5T6X4 162 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 SPATA12Q7Z6I5 190 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 RNF182Q8N6D2 247 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 FANCD2OSQ96PS1 177 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 RNF5Q99942 180 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 C1RLQ9NZP8 487 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 ABCA2Q9BZC7 2435 aa9.45□□□□□ -0.9
CAPRIN1-202ENST00000389645 C19orf71A6NCJ1 209 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 OVOL3O00110 214 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 BVES-AS1Q5T3Y7 98 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 C7orf71A4D174 169 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 D6R8Y8 96 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 ERCC8Q13216 396 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 LY6EQ16553 131 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 MTURNQ8N3F0 131 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 CCL19Q99731 98 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 A0A1B0GXF2 115 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 LY6LH3BQJ8 138 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 CKS2P33552 79 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 LMO4P61968 165 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 BRD3OSQ6XYD6 125 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 OR11H6Q8NGC7 330 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 CFHR4Q92496 578 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 VGLL1Q99990 258 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 NDFIP1Q9BT67 221 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 PRSS22Q9GZN4 317 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 ZNF492Q9P255 531 aa9.44□□□□□ -0.9
CAPRIN1-202ENST00000389645 SAA4P35542 130 aa9.43□□□□□ -0.9
CAPRIN1-202ENST00000389645 C18orf15Q96N68 181 aa9.43□□□□□ -0.9
CAPRIN1-202ENST00000389645 ATP6V0BQ99437 205 aa9.43□□□□□ -0.9
CAPRIN1-202ENST00000389645 SYS1-DBNDD2H3BUS1 97 aa9.43□□□□□ -0.9
CAPRIN1-202ENST00000389645 SH2D1AO60880 128 aa9.43□□□□□ -0.9
CAPRIN1-202ENST00000389645 TMEM14CQ9P0S9 112 aa9.43□□□□□ -0.9
CAPRIN1-202ENST00000389645 NAV2Q8IVL1 2488 aa9.43□□□□□ -0.9
CAPRIN1-202ENST00000389645 CCDC168Q8NDH2 2452 aa9.43□□□□□ -0.9
CAPRIN1-202ENST00000389645 IGLV2-11P01706 119 aa9.43□□□□□ -0.9
CAPRIN1-202ENST00000389645 GATA3P23771 443 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms