RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 C1orf122Q6ZSJ8 110 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 TEX29Q8N6K0 151 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 BBC3Q96PG8 261 aaPredicted RBP9.62□□□□□ -0.87
C9orf3-203ENST00000375315 TTTY13Q9BZ97 58 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 RNF7Q9UBF6 113 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 USP9YO00507 2555 aaPredicted RBP9.62□□□□□ -0.87
C9orf3-203ENST00000375315 UPK2O00526 184 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 FXYD7P58549 80 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 POU2AF1Q16633 256 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 Q6AWC8 147 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 ORMDL3Q8N138 153 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 FAM169BQ8N8A8 192 aa9.62□□□□□ -0.87
C9orf3-203ENST00000375315 C19orf84I3L1E1 186 aa9.61□□□□□ -0.87
C9orf3-203ENST00000375315 CNIH1O95406 144 aa9.61□□□□□ -0.87
C9orf3-203ENST00000375315 CLEC3BP05452 202 aa9.61□□□□□ -0.87
C9orf3-203ENST00000375315 KLF17Q5JT82 389 aaPredicted RBP9.61□□□□□ -0.87
C9orf3-203ENST00000375315 Q86TA4 180 aa9.61□□□□□ -0.87
C9orf3-203ENST00000375315 CIARTQ8N365 385 aaPredicted RBP9.61□□□□□ -0.87
C9orf3-203ENST00000375315 SRRM5B3KS81 715 aa9.61□□□□□ -0.87
C9orf3-203ENST00000375315 ZNRD1Q9P1U0 126 aa9.61□□□□□ -0.87
C9orf3-203ENST00000375315 K7EMI3 77 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 HLA-DRB4P13762 266 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 ZNF134P52741 427 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 ERHP84090 104 aaKnown RBP9.6□□□□□ -0.87
C9orf3-203ENST00000375315 TPPP3Q9BW30 176 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 HLA-DRB4X5D2U9 266 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 LYPD2Q6UXB3 125 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 SMIM20Q8N5G0 67 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 Q9H3A6 140 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 DOPEY1Q5JWR5 2465 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 PRSS29PA6NIE9 313 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 TNFRSF13BO14836 293 aaPredicted RBP9.6□□□□□ -0.87
C9orf3-203ENST00000375315 FSTL3O95633 263 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 IGKCP01834 107 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 ZNF493Q6ZR52 646 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 PRNTQ86SH4 94 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.6□□□□□ -0.87
C9orf3-203ENST00000375315 PPDPFLQ8WWR9 84 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 FLYWCH2Q96CP2 140 aaKnown RBP9.6□□□□□ -0.87
C9orf3-203ENST00000375315 HIST1H4GQ99525 98 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 UBTD1Q9HAC8 227 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 U3KQK5 164 aa9.6□□□□□ -0.87
C9orf3-203ENST00000375315 ABCA1O95477 2261 aa9.59□□□□□ -0.87
C9orf3-203ENST00000375315 EVI2AP22794 236 aa9.59□□□□□ -0.87
C9orf3-203ENST00000375315 FCER1GP30273 86 aa9.59□□□□□ -0.87
C9orf3-203ENST00000375315 RPL32P62910 135 aaKnown RBP9.59□□□□□ -0.87
C9orf3-203ENST00000375315 MZT1Q08AG7 82 aa9.59□□□□□ -0.87
C9orf3-203ENST00000375315 CFAP126Q5VTH2 177 aa9.59□□□□□ -0.87
C9orf3-203ENST00000375315 ZNF562Q6V9R5 426 aa9.59□□□□□ -0.87
C9orf3-203ENST00000375315 WFDC3Q8IUB2 231 aa9.59□□□□□ -0.87
C9orf3-203ENST00000375315 NPIPB3Q92617 1050 aa9.59□□□□□ -0.87
C9orf3-203ENST00000375315 DLX4Q92988 240 aaPredicted RBP9.59□□□□□ -0.87
C9orf3-203ENST00000375315 HHLA3Q9XRX5 114 aa9.59□□□□□ -0.87
C9orf3-203ENST00000375315 OVOL3O00110 214 aa9.59□□□□□ -0.87
C9orf3-203ENST00000375315 ORM2P19652 201 aa9.59□□□□□ -0.87
C9orf3-203ENST00000375315 GLMPQ8WWB7 406 aa9.59□□□□□ -0.87
C9orf3-203ENST00000375315 WI2-2373I1.2A0A1W2PRP0 233 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 PRSS1P07477 247 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 TNFRSF1AP19438 455 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 ODF1Q14990 250 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 GTSCR1Q86UQ5 136 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 PPP1R35Q8TAP8 253 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 ZMAT4Q9H898 229 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 CSMD2Q7Z408 3487 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 DOPEY2Q9Y3R5 2298 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 CCDC168Q8NDH2 2452 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 ARL3P36405 182 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 LOXL3P58215 753 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 FHL3Q13643 280 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 FAM104BQ5XKR9 115 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 NFE4Q86UQ8 179 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 NUP37Q8NFH4 326 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 RAX2Q96IS3 184 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 RITA1Q96K30 269 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.58□□□□□ -0.883e-7■■□□□ 11.6
C9orf3-203ENST00000375315 CSMD1Q96PZ7 3565 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 TRAV8-1A0A0A6YYK1 113 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 A0A1W2PPR1 153 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 SAA2P0DJI9 122 aaPredicted RBP9.58□□□□□ -0.88
C9orf3-203ENST00000375315 PAX8Q06710 450 aa9.58□□□□□ -0.88
C9orf3-203ENST00000375315 C1orf229Q6ZS94 237 aaPredicted RBP9.58□□□□□ -0.88
C9orf3-203ENST00000375315 NOTCH2Q04721 2471 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 GAGE12JA6NER3 117 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 TMEM262E9PQX1 116 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 GAGE7O76087 117 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 DPM2O94777 84 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 GAGE12FP0CL80 117 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 GAGE12GP0CL81 117 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 GAGE12IP0CL82 117 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 CCL3L1P16619 93 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 GAGE4Q13068 117 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 TWIST1Q15672 202 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 ZC2HC1BQ5TFG8 222 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 IL4P05112 153 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 LINC01559Q495D7 138 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 AMN1Q8IY45 258 aa9.57□□□□□ -0.88
C9orf3-203ENST00000375315 GOLT1AQ6ZVE7 132 aa9.56□□□□□ -0.88
C9orf3-203ENST00000375315 THAP8Q8NA92 274 aa9.56□□□□□ -0.88
C9orf3-203ENST00000375315 OR10X1Q8NGY0 326 aa9.56□□□□□ -0.88
C9orf3-203ENST00000375315 RAB9BQ9NP90 201 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms