RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 CLPSL1A2RUU4 121 aa13.96□□□□□ -0.17
CD40-201ENST00000372276 G3V318 75 aa13.96□□□□□ -0.17
CD40-201ENST00000372276 PRELID3AQ96N28 172 aa13.96□□□□□ -0.17
CD40-201ENST00000372276 LENEPQ9Y5L5 61 aa13.96□□□□□ -0.17
CD40-201ENST00000372276 RNF224P0DH78 156 aa13.95□□□□□ -0.18
CD40-201ENST00000372276 NPFFR1Q9GZQ6 430 aa13.95□□□□□ -0.18
CD40-201ENST00000372276 GATA3P23771 443 aa13.94□□□□□ -0.18
CD40-201ENST00000372276 TMEM78Q5T7P6 136 aa13.94□□□□□ -0.18
CD40-201ENST00000372276 UBR5O95071 2799 aaPredicted RBP13.94□□□□□ -0.18
CD40-201ENST00000372276 NDUFA4O00483 81 aa13.93□□□□□ -0.18
CD40-201ENST00000372276 ORM1P02763 201 aa13.93□□□□□ -0.18
CD40-201ENST00000372276 TSPOP30536 169 aa13.93□□□□□ -0.18
CD40-201ENST00000372276 ZNF138P52744 262 aa13.93□□□□□ -0.18
CD40-201ENST00000372276 C9orf139Q6ZV77 190 aa13.93□□□□□ -0.18
CD40-201ENST00000372276 Q71RC1 249 aaPredicted RBP13.93□□□□□ -0.18
CD40-201ENST00000372276 RELNP78509 3460 aa13.93□□□□□ -0.18
CD40-201ENST00000372276 HELZ2Q9BYK8 2649 aaKnown RBP13.93□□□□□ -0.18
CD40-201ENST00000372276 TRGV3P03979 118 aa13.93□□□□□ -0.18
CD40-201ENST00000372276 TWIST1Q15672 202 aa13.93□□□□□ -0.18
CD40-201ENST00000372276 C9orf47Q6ZRZ4 202 aa13.93□□□□□ -0.18
CD40-201ENST00000372276 PIFOQ8TCI5 191 aa13.93□□□□□ -0.18
CD40-201ENST00000372276 SPOCK3Q9BQ16 436 aa13.93□□□□□ -0.18
CD40-201ENST00000372276 TMSB15BA0A087X1C1 80 aa13.92□□□□□ -0.18
CD40-201ENST00000372276 IGHV4-61A0A0C4DH41 118 aa13.92□□□□□ -0.18
CD40-201ENST00000372276 D6R8Y8 96 aa13.92□□□□□ -0.18
CD40-201ENST00000372276 M0QZ24 198 aa13.92□□□□□ -0.18
CD40-201ENST00000372276 IGHG2P01859 326 aa13.92□□□□□ -0.18
CD40-201ENST00000372276 IGLL1P15814 213 aa13.92□□□□□ -0.18
CD40-201ENST00000372276 GAGE1Q13065 139 aa13.92□□□□□ -0.18
CD40-201ENST00000372276 LINC01545Q5VT33 79 aa13.92□□□□□ -0.18
CD40-201ENST00000372276 ZNF580Q9UK33 172 aa13.92□□□□□ -0.18
CD40-201ENST00000372276 MYO18BQ8IUG5 2567 aa13.92□□□□□ -0.18
CD40-201ENST00000372276 IGHV3-35A0A0C4DH35 117 aa13.91□□□□□ -0.18
CD40-201ENST00000372276 LINC01548A6NM66 108 aa13.91□□□□□ -0.18
CD40-201ENST00000372276 CSN3P07498 182 aa13.91□□□□□ -0.18
CD40-201ENST00000372276 CKS2P33552 79 aa13.91□□□□□ -0.18
CD40-201ENST00000372276 ARL3P36405 182 aa13.91□□□□□ -0.18
CD40-201ENST00000372276 ZNF80P51504 273 aaPredicted RBP13.91□□□□□ -0.18
CD40-201ENST00000372276 MRPL51Q4U2R6 128 aaKnown RBP13.91□□□□□ -0.18
CD40-201ENST00000372276 PSMG4Q5JS54 123 aa13.91□□□□□ -0.18
CD40-201ENST00000372276 C8orf86Q6ZUL3 223 aa13.91□□□□□ -0.18
CD40-201ENST00000372276 ATOH7Q8N100 152 aa13.91□□□□□ -0.18
CD40-201ENST00000372276 Q8TAT8 98 aa13.91□□□□□ -0.18
CD40-201ENST00000372276 ZNF747Q9BV97 191 aa13.91□□□□□ -0.18
CD40-201ENST00000372276 HRNRQ86YZ3 2850 aaPredicted RBP13.91□□□□□ -0.18
CD40-201ENST00000372276 TRAV40A0A0B4J280 105 aa13.9□□□□□ -0.18
CD40-201ENST00000372276 A0A0G2JLM5 398 aa13.9□□□□□ -0.18
CD40-201ENST00000372276 TMEM213A2RRL7 107 aa13.9□□□□□ -0.18
CD40-201ENST00000372276 ATP5J2P56134 94 aa13.9□□□□□ -0.18
CD40-201ENST00000372276 SMIM15Q7Z3B0 74 aa13.9□□□□□ -0.18
CD40-201ENST00000372276 DPF1Q92782 380 aa13.9□□□□□ -0.18
CD40-201ENST00000372276 PMCHL2Q9BQD1 86 aa13.9□□□□□ -0.18
CD40-201ENST00000372276 FASNP49327 2511 aaKnown RBP13.9□□□□□ -0.18
CD40-201ENST00000372276 A6NDX4 124 aa13.9□□□□□ -0.19
CD40-201ENST00000372276 MSMBP08118 114 aa13.9□□□□□ -0.19
CD40-201ENST00000372276 HLA-DMBP28068 263 aa13.9□□□□□ -0.19
CD40-201ENST00000372276 AMN1Q8IY45 258 aa13.9□□□□□ -0.19
CD40-201ENST00000372276 SIGLEC8Q9NYZ4 499 aa13.9□□□□□ -0.19
CD40-201ENST00000372276 GCN1Q92616 2671 aaKnown RBP13.89□□□□□ -0.19
CD40-201ENST00000372276 CACNG7P62955 275 aa13.89□□□□□ -0.19
CD40-201ENST00000372276 TMEM219Q86XT9 240 aa13.89□□□□□ -0.19
CD40-201ENST00000372276 GLMPQ8WWB7 406 aa13.89□□□□□ -0.19
CD40-201ENST00000372276 C16orf92Q96LL3 132 aa13.89□□□□□ -0.19
CD40-201ENST00000372276 LINC00477Q96M19 166 aa13.89□□□□□ -0.19
CD40-201ENST00000372276 AGPAT4-IT1Q9H0P7 198 aa13.89□□□□□ -0.19
CD40-201ENST00000372276 TRAV8-2A0A0B4J237 113 aa13.88□□□□□ -0.19
CD40-201ENST00000372276 B4DSR2 109 aa13.88□□□□□ -0.19
CD40-201ENST00000372276 OVOL1O14753 267 aa13.88□□□□□ -0.19
CD40-201ENST00000372276 TCF21O43680 179 aa13.88□□□□□ -0.19
CD40-201ENST00000372276 ERCC8Q13216 396 aa13.88□□□□□ -0.19
CD40-201ENST00000372276 SAMD13Q5VXD3 122 aa13.88□□□□□ -0.19
CD40-201ENST00000372276 NXT2Q9NPJ8 142 aaKnown RBP13.88□□□□□ -0.19
CD40-201ENST00000372276 LRBAP50851 2863 aa13.88□□□□□ -0.19
CD40-201ENST00000372276 TENM4Q6N022 2769 aa13.88□□□□□ -0.19
CD40-201ENST00000372276 IGHV3OR16-8A0A075B7F1 116 aa13.87□□□□□ -0.19
CD40-201ENST00000372276 LINC01546A6NGU7 62 aa13.87□□□□□ -0.19
CD40-201ENST00000372276 HBDP02042 147 aa13.87□□□□□ -0.19
CD40-201ENST00000372276 IFI27P40305 119 aaPredicted RBP13.87□□□□□ -0.19
CD40-201ENST00000372276 BATFQ16520 125 aa13.87□□□□□ -0.19
CD40-201ENST00000372276 IGFL4Q6B9Z1 124 aa13.87□□□□□ -0.19
CD40-201ENST00000372276 SLC25A34Q6PIV7 304 aa13.87□□□□□ -0.19
CD40-201ENST00000372276 MAP1LC3AQ9H492 121 aa13.87□□□□□ -0.19
CD40-201ENST00000372276 FLNCQ14315 2725 aa13.87□□□□□ -0.19
CD40-201ENST00000372276 TRBV7-9A0A0J9YWB2 115 aa13.86□□□□□ -0.19
CD40-201ENST00000372276 PRAC2D3DTV9 90 aa13.86□□□□□ -0.19
CD40-201ENST00000372276 ZNF25P17030 456 aaPredicted RBP13.86□□□□□ -0.19
CD40-201ENST00000372276 PPIFP30405 207 aaKnown RBP13.86□□□□□ -0.19
CD40-201ENST00000372276 SLC25A16P16260 332 aa13.86□□□□□ -0.19
CD40-201ENST00000372276 LGALS9BQ3B8N2 356 aa13.86□□□□□ -0.19
CD40-201ENST00000372276 MAJINQ3KP22 176 aa13.86□□□□□ -0.19
CD40-201ENST00000372276 LGALS9CQ6DKI2 356 aa13.86□□□□□ -0.19
CD40-201ENST00000372276 LINC00173Q6ZV60 143 aa13.86□□□□□ -0.19
CD40-201ENST00000372276 IL17RELQ6ZVW7 336 aa13.86□□□□□ -0.19
CD40-201ENST00000372276 RNF182Q8N6D2 247 aa13.86□□□□□ -0.19
CD40-201ENST00000372276 IGHV4-4A0A075B6R2 117 aa13.85□□□□□ -0.19
CD40-201ENST00000372276 PRR31Q5SQ13 230 aa13.85□□□□□ -0.19
CD40-201ENST00000372276 BRD3OSQ6XYD6 125 aa13.85□□□□□ -0.19
CD40-201ENST00000372276 OR1N2Q8NGR9 330 aa13.85□□□□□ -0.19
CD40-201ENST00000372276 H3BUX3 64 aa13.84□□□□□ -0.19
CD40-201ENST00000372276 SRSF1Q07955 248 aaKnown RBP eCLIP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms