RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 PPIFP30405 207 aaKnown RBP13.72□□□□□ -0.21
RTCA-203ENST00000370128 LINC01560Q8TB33 94 aa13.72□□□□□ -0.21
RTCA-203ENST00000370128 TRGV9Q99603 122 aa13.72□□□□□ -0.21
RTCA-203ENST00000370128 IGHG4P01861 327 aa13.71□□□□□ -0.21
RTCA-203ENST00000370128 SRD5A1P18405 259 aa13.71□□□□□ -0.21
RTCA-203ENST00000370128 NMUP48645 174 aa13.71□□□□□ -0.21
RTCA-203ENST00000370128 NFE4Q86UQ8 179 aa13.71□□□□□ -0.21
RTCA-203ENST00000370128 NDUFV3P56181 108 aaKnown RBP13.71□□□□□ -0.21
RTCA-203ENST00000370128 GNG5P63218 68 aa13.71□□□□□ -0.21
RTCA-203ENST00000370128 LGALS9BQ3B8N2 356 aa13.71□□□□□ -0.21
RTCA-203ENST00000370128 LGALS9CQ6DKI2 356 aa13.71□□□□□ -0.21
RTCA-203ENST00000370128 PTH2Q96A98 100 aa13.71□□□□□ -0.21
RTCA-203ENST00000370128 SPANXA1Q9NS26 97 aa13.71□□□□□ -0.21
RTCA-203ENST00000370128 TLN1Q9Y490 2541 aaKnown RBP13.71□□□□□ -0.22
RTCA-203ENST00000370128 IGHV3-21A0A0B4J1V1 117 aa13.7□□□□□ -0.22
RTCA-203ENST00000370128 RHODO00212 210 aa13.7□□□□□ -0.22
RTCA-203ENST00000370128 PPP1R27Q86WC6 154 aa13.7□□□□□ -0.22
RTCA-203ENST00000370128 SCGB2A1O75556 95 aa13.7□□□□□ -0.22
RTCA-203ENST00000370128 C8orf46Q8TAG6 207 aa13.7□□□□□ -0.22
RTCA-203ENST00000370128 SCNM1Q9BWG6 230 aa13.7□□□□□ -0.22
RTCA-203ENST00000370128 CSDC2Q9Y534 153 aaKnown RBP13.7□□□□□ -0.22
RTCA-203ENST00000370128 CEP295Q9C0D2 2601 aa13.7□□□□□ -0.22
RTCA-203ENST00000370128 CSN1S1P47710 185 aa13.69□□□□□ -0.22
RTCA-203ENST00000370128 VCX2Q9H322 139 aa13.69□□□□□ -0.22
RTCA-203ENST00000370128 EPDR1Q9UM22 224 aa13.69□□□□□ -0.22
RTCA-203ENST00000370128 ZZEF1O43149 2961 aa13.69□□□□□ -0.22
RTCA-203ENST00000370128 TEX22C9J3V5 150 aa13.69□□□□□ -0.22
RTCA-203ENST00000370128 AP5S1Q9NUS5 200 aa13.69□□□□□ -0.22
RTCA-203ENST00000370128 SLC25A5P05141 298 aaKnown RBP13.68□□□□□ -0.22
RTCA-203ENST00000370128 COX7A1P24310 79 aa13.68□□□□□ -0.22
RTCA-203ENST00000370128 GRNP28799 593 aaKnown RBP13.68□□□□□ -0.22
RTCA-203ENST00000370128 C7orf69Q9H7B7 122 aa13.68□□□□□ -0.22
RTCA-203ENST00000370128 RELNP78509 3460 aa13.68□□□□□ -0.22
RTCA-203ENST00000370128 NPIPB6E9PJ23 425 aa13.68□□□□□ -0.22
RTCA-203ENST00000370128 RBP4P02753 201 aa13.68□□□□□ -0.22
RTCA-203ENST00000370128 CHAC1Q9BUX1 264 aa13.68□□□□□ -0.22
RTCA-203ENST00000370128 TRAV25A0A0B4J276 109 aa13.67□□□□□ -0.22
RTCA-203ENST00000370128 PGPA6NDG6 321 aa13.67□□□□□ -0.22
RTCA-203ENST00000370128 NRGNQ92686 78 aa13.67□□□□□ -0.22
RTCA-203ENST00000370128 FBXL15Q9H469 300 aa13.67□□□□□ -0.22
RTCA-203ENST00000370128 SOX21Q9Y651 276 aaPredicted RBP13.67□□□□□ -0.22
RTCA-203ENST00000370128 PTPRQQ9UMZ3 2332 aa13.67□□□□□ -0.22
RTCA-203ENST00000370128 A4D1N5 150 aa13.67□□□□□ -0.22
RTCA-203ENST00000370128 GP9P14770 177 aa13.67□□□□□ -0.22
RTCA-203ENST00000370128 CEND1Q8N111 149 aa13.67□□□□□ -0.22
RTCA-203ENST00000370128 OR8A1Q8NGG7 326 aa13.67□□□□□ -0.22
RTCA-203ENST00000370128 RPEQ96AT9 228 aa13.67□□□□□ -0.22
RTCA-203ENST00000370128 SGK494Q96LW2 274 aa13.67□□□□□ -0.22
RTCA-203ENST00000370128 KLF12Q9Y4X4 402 aa13.67□□□□□ -0.22
RTCA-203ENST00000370128 CHEK1O14757 476 aa13.66□□□□□ -0.22
RTCA-203ENST00000370128 CSN3P07498 182 aa13.66□□□□□ -0.22
RTCA-203ENST00000370128 SMCPP49901 116 aaPredicted RBP13.66□□□□□ -0.22
RTCA-203ENST00000370128 CFAP126Q5VTH2 177 aa13.66□□□□□ -0.22
RTCA-203ENST00000370128 TMEM8BA6NDV4 472 aa13.66□□□□□ -0.22
RTCA-203ENST00000370128 WIPF1O43516 503 aa13.66□□□□□ -0.22
RTCA-203ENST00000370128 ZNF672Q499Z4 452 aaPredicted RBP13.66□□□□□ -0.22
RTCA-203ENST00000370128 SRSF12Q8WXF0 261 aaKnown RBP13.66□□□□□ -0.22
RTCA-203ENST00000370128 TACC2O95359 2948 aa13.66□□□□□ -0.22
RTCA-203ENST00000370128 TRBV20-1A0A075B6N2 111 aa13.65□□□□□ -0.22
RTCA-203ENST00000370128 LY6LH3BQJ8 138 aa13.65□□□□□ -0.22
RTCA-203ENST00000370128 MAP1LC3AQ9H492 121 aa13.65□□□□□ -0.22
RTCA-203ENST00000370128 APOHP02749 345 aaPredicted RBP13.65□□□□□ -0.22
RTCA-203ENST00000370128 PPDPFLQ8WWR9 84 aa13.65□□□□□ -0.22
RTCA-203ENST00000370128 MLST8Q9BVC4 326 aa13.65□□□□□ -0.22
RTCA-203ENST00000370128 ABCA1O95477 2261 aa13.65□□□□□ -0.22
RTCA-203ENST00000370128 CACNG7P62955 275 aa13.64□□□□□ -0.23
RTCA-203ENST00000370128 RRN3P1Q2M238 152 aa13.64□□□□□ -0.23
RTCA-203ENST00000370128 FBXL19-AS1Q494R0 122 aa13.64□□□□□ -0.23
RTCA-203ENST00000370128 KIR2DL4Q99706 377 aa13.64□□□□□ -0.23
RTCA-203ENST00000370128 LRBAP50851 2863 aa13.64□□□□□ -0.23
RTCA-203ENST00000370128 DCHS2Q6V1P9 2916 aa13.64□□□□□ -0.23
RTCA-203ENST00000370128 H3BTX0 84 aa13.64□□□□□ -0.23
RTCA-203ENST00000370128 LTAP01374 205 aa13.64□□□□□ -0.23
RTCA-203ENST00000370128 TPRP12270 2363 aaKnown RBP13.64□□□□□ -0.23
RTCA-203ENST00000370128 I3L2K1 104 aa13.63□□□□□ -0.23
RTCA-203ENST00000370128 GAGE2BQ13066 116 aa13.63□□□□□ -0.23
RTCA-203ENST00000370128 C12orf74Q32Q52 190 aa13.63□□□□□ -0.23
RTCA-203ENST00000370128 GAGE2EQ4V326 116 aa13.63□□□□□ -0.23
RTCA-203ENST00000370128 GAGE2DQ9UEU5 116 aa13.63□□□□□ -0.23
RTCA-203ENST00000370128 CARD19Q96LW7 228 aa13.63□□□□□ -0.23
RTCA-203ENST00000370128 RNF5Q99942 180 aa13.63□□□□□ -0.23
RTCA-203ENST00000370128 Q9H3A6 140 aa13.63□□□□□ -0.23
RTCA-203ENST00000370128 ONECUT1Q9UBC0 465 aa13.63□□□□□ -0.23
RTCA-203ENST00000370128 ANKHD1Q8IWZ3 2542 aaKnown RBP13.63□□□□□ -0.23
RTCA-203ENST00000370128 IFITM1P13164 125 aa13.62□□□□□ -0.23
RTCA-203ENST00000370128 LINC00322Q6ZN03 302 aaPredicted RBP13.62□□□□□ -0.23
RTCA-203ENST00000370128 LY6G5BQ8NDX9 201 aa13.62□□□□□ -0.23
RTCA-203ENST00000370128 HIGD1AQ9Y241 93 aa13.62□□□□□ -0.23
RTCA-203ENST00000370128 TIMM23O14925 209 aa13.62□□□□□ -0.23
RTCA-203ENST00000370128 LY6HO94772 140 aa13.62□□□□□ -0.23
RTCA-203ENST00000370128 TCRAP04437 139 aa13.62□□□□□ -0.23
RTCA-203ENST00000370128 LYZP61626 148 aa13.62□□□□□ -0.23
RTCA-203ENST00000370128 SRSF1Q07955 248 aaKnown RBP eCLIP13.62□□□□□ -0.23
RTCA-203ENST00000370128 PLGLAQ15195 96 aa13.62□□□□□ -0.23
RTCA-203ENST00000370128 PIFOQ8TCI5 191 aa13.62□□□□□ -0.23
RTCA-203ENST00000370128 TMEM262E9PQX1 116 aa13.61□□□□□ -0.23
RTCA-203ENST00000370128 K7EMI3 77 aa13.61□□□□□ -0.23
RTCA-203ENST00000370128 TTC32Q5I0X7 151 aa13.61□□□□□ -0.23
RTCA-203ENST00000370128 FAM159AQ6UWV7 190 aa13.61□□□□□ -0.23
RTCA-203ENST00000370128 TMEM126AQ9H061 195 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms