RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 IGHG4P01861 327 aa8.24□□□□□ -1.09
SMC3-201ENST00000361804 FAM162BQ5T6X4 162 aa8.24□□□□□ -1.09
SMC3-201ENST00000361804 FAM104BQ5XKR9 115 aa8.24□□□□□ -1.09
SMC3-201ENST00000361804 VSTM5A8MXK1 200 aa8.23□□□□□ -1.09
SMC3-201ENST00000361804 K7EQM0 130 aa8.23□□□□□ -1.09
SMC3-201ENST00000361804 ORM1P02763 201 aa8.23□□□□□ -1.09
SMC3-201ENST00000361804 CKS2P33552 79 aa8.23□□□□□ -1.09
SMC3-201ENST00000361804 CSN1S1P47710 185 aa8.23□□□□□ -1.09
SMC3-201ENST00000361804 HIST1H1AQ02539 215 aaPredicted RBP8.23□□□□□ -1.09
SMC3-201ENST00000361804 AAMDCQ9H7C9 122 aa8.23□□□□□ -1.09
SMC3-201ENST00000361804 C12orf54Q6X4T0 127 aa8.23□□□□□ -1.09
SMC3-201ENST00000361804 VPS25Q9BRG1 176 aa8.23□□□□□ -1.09
SMC3-201ENST00000361804 WI2-2373I1.2A0A1W2PRP0 233 aa8.23□□□□□ -1.09
SMC3-201ENST00000361804 B9A039 149 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 H3BUT2 72 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 TMEM97Q5BJF2 176 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 PRR25Q96S07 402 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 DPM3Q9P2X0 92 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 IGKV2D-26A0A0A0MRZ7 120 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 GAGE12BA1L429 117 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 J3KRW8 73 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 ORMDL3Q8N138 153 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 PKD1L2Q7Z442 2459 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 NIPBLQ6KC79 2804 aaeCLIP8.22□□□□□ -1.091e-5■■■■□ 22.3
SMC3-201ENST00000361804 TRAV26-2A0A0B4J265 109 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 C5orf64Q2M2E5 130 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 OCIAD2Q56VL3 154 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 LINC01548A6NM66 108 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 DEFB104AQ8WTQ1 72 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 TNFRSF14Q92956 283 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 C21orf62Q9NYP8 219 aa8.22□□□□□ -1.09
SMC3-201ENST00000361804 IGLV11-55A0A075B6I3 123 aa8.21□□□□□ -1.09
SMC3-201ENST00000361804 ARPC1AQ92747 370 aa8.21□□□□□ -1.09
SMC3-201ENST00000361804 CDKN1BP46527 198 aa8.21□□□□□ -1.1
SMC3-201ENST00000361804 RIPPLY3P57055 190 aa8.21□□□□□ -1.1
SMC3-201ENST00000361804 ECSCRQ19T08 205 aa8.21□□□□□ -1.1
SMC3-201ENST00000361804 CD5LO43866 347 aa8.21□□□□□ -1.1
SMC3-201ENST00000361804 CTSGP08311 255 aa8.21□□□□□ -1.1
SMC3-201ENST00000361804 DEFB1P60022 68 aa8.21□□□□□ -1.1
SMC3-201ENST00000361804 IL17RELQ6ZVW7 336 aa8.21□□□□□ -1.1
SMC3-201ENST00000361804 FER1L6-AS1Q8NA97 138 aa8.21□□□□□ -1.1
SMC3-201ENST00000361804 MS4A6AQ9H2W1 248 aa8.21□□□□□ -1.1
SMC3-201ENST00000361804 LINC00527Q9UJ94 153 aa8.21□□□□□ -1.1
SMC3-201ENST00000361804 ANK3Q12955 4377 aaKnown RBP8.21□□□□□ -1.1
SMC3-201ENST00000361804 CCL21O00585 134 aa8.2□□□□□ -1.1
SMC3-201ENST00000361804 TRGV3P03979 118 aa8.2□□□□□ -1.1
SMC3-201ENST00000361804 MFAP4P55083 255 aa8.2□□□□□ -1.1
SMC3-201ENST00000361804 ADORA2A-AS1P86434 159 aa8.2□□□□□ -1.1
SMC3-201ENST00000361804 IFI27L1Q96BM0 104 aa8.2□□□□□ -1.1
SMC3-201ENST00000361804 USP9XQ93008 2570 aaPredicted RBP8.2□□□□□ -1.1
SMC3-201ENST00000361804 K7ERJ3 54 aa8.2□□□□□ -1.1
SMC3-201ENST00000361804 FOXC1Q12948 553 aa8.2□□□□□ -1.1
SMC3-201ENST00000361804 ZNF493Q6ZR52 646 aa8.2□□□□□ -1.1
SMC3-201ENST00000361804 C11orf21Q9P2W6 132 aa8.2□□□□□ -1.1
SMC3-201ENST00000361804 ZFP36P26651 326 aaKnown RBP8.19□□□□□ -1.1
SMC3-201ENST00000361804 PAX8Q06710 450 aa8.19□□□□□ -1.1
SMC3-201ENST00000361804 KIR3DS1Q14943 382 aa8.19□□□□□ -1.1
SMC3-201ENST00000361804 RNF185Q96GF1 192 aa8.19□□□□□ -1.1
SMC3-201ENST00000361804 G3V318 75 aa8.19□□□□□ -1.1
SMC3-201ENST00000361804 HBDP02042 147 aa8.19□□□□□ -1.1
SMC3-201ENST00000361804 PAX2Q02962 417 aa8.19□□□□□ -1.1
SMC3-201ENST00000361804 LEPP41159 167 aa8.19□□□□□ -1.1
SMC3-201ENST00000361804 VMO1Q7Z5L0 202 aa8.19□□□□□ -1.1
SMC3-201ENST00000361804 GAGE10A6NGK3 116 aa8.18□□□□□ -1.1
SMC3-201ENST00000361804 NDUFA3O95167 84 aa8.18□□□□□ -1.1
SMC3-201ENST00000361804 GTSCR1Q86UQ5 136 aa8.18□□□□□ -1.1
SMC3-201ENST00000361804 U3KQK5 164 aa8.18□□□□□ -1.1
SMC3-201ENST00000361804 AGRNO00468 2067 aa8.18□□□□□ -1.1
SMC3-201ENST00000361804 IGHV3OR16-10A0A075B7F0 116 aa8.18□□□□□ -1.1
SMC3-201ENST00000361804 TRBV6-1A0A0K0K1D8 114 aa8.18□□□□□ -1.1
SMC3-201ENST00000361804 SMAD7O15105 426 aaKnown RBP8.18□□□□□ -1.1
SMC3-201ENST00000361804 IGF1P05019 195 aa8.18□□□□□ -1.1
SMC3-201ENST00000361804 CLEC3BP05452 202 aa8.18□□□□□ -1.1
SMC3-201ENST00000361804 LYPD1Q8N2G4 141 aa8.18□□□□□ -1.1
SMC3-201ENST00000361804 MEGF9Q9H1U4 602 aa8.18□□□□□ -1.1
SMC3-201ENST00000361804 PEF1Q9UBV8 284 aaKnown RBP8.18□□□□□ -1.1
SMC3-201ENST00000361804 USP24Q9UPU5 2620 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 IGHV7-81A0A0B4J1V7 117 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 C15orf32Q32M92 178 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 BOD1L2Q8IYS8 172 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 GATD1Q8NB37 220 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 LY6G5BQ8NDX9 201 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 A1L4Q6 167 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 ADAMTSL5Q6ZMM2 481 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 AJUBAQ96IF1 538 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.17□□□□□ -1.12e-6■■■■□ 22.8
SMC3-201ENST00000361804 FBLL1A6NHQ2 334 aaKnown RBP8.17□□□□□ -1.1
SMC3-201ENST00000361804 IGLC6P0CF74 106 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 GCSHP23434 173 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 FXYD2P54710 66 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 ZNF562Q6V9R5 426 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 NPBQ8NG41 125 aa8.17□□□□□ -1.1
SMC3-201ENST00000361804 PRSS1P07477 247 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 CLEC19AQ6UXS0 136 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 OR11H6Q8NGC7 330 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 UFC1Q9Y3C8 167 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 TNFRSF6BO95407 300 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 LGALS9BQ3B8N2 356 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 LGALS9CQ6DKI2 356 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 TMEM158Q8WZ71 300 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms