RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TRBV19A0A075B6N1 114 aa10.83□□□□□ -0.67
TRIM4-201ENST00000349062 TOMM40O96008 361 aa10.83□□□□□ -0.67
TRIM4-201ENST00000349062 TGFAP01135 160 aa10.83□□□□□ -0.67
TRIM4-201ENST00000349062 SLC25A34Q6PIV7 304 aa10.83□□□□□ -0.67
TRIM4-201ENST00000349062 RABAC1Q9UI14 185 aa10.83□□□□□ -0.67
TRIM4-201ENST00000349062 FLNAP21333 2647 aaKnown RBP10.83□□□□□ -0.68
TRIM4-201ENST00000349062 DEFB1P60022 68 aa10.83□□□□□ -0.68
TRIM4-201ENST00000349062 PAX2Q02962 417 aa10.83□□□□□ -0.68
TRIM4-201ENST00000349062 ERCC8Q13216 396 aa10.83□□□□□ -0.68
TRIM4-201ENST00000349062 ARL6IP6Q8N6S5 226 aa10.83□□□□□ -0.68
TRIM4-201ENST00000349062 TMEM75Q8N9X5 138 aa10.83□□□□□ -0.68
TRIM4-201ENST00000349062 LY96Q9Y6Y9 160 aa10.83□□□□□ -0.68
TRIM4-201ENST00000349062 VWC2LB2RUY7 222 aa10.83□□□□□ -0.68
TRIM4-201ENST00000349062 CSN1S1P47710 185 aa10.83□□□□□ -0.68
TRIM4-201ENST00000349062 AP1S3Q96PC3 154 aa10.83□□□□□ -0.68
TRIM4-201ENST00000349062 AVPP01185 164 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 FXYD7P58549 80 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 PVRIGQ6DKI7 326 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 CST9LQ9H4G1 147 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 OTORQ9NRC9 128 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 PSG8Q9UQ74 426 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 NPIPB5A8MRT5 1133 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 F8W735 103 aaPredicted RBP10.82□□□□□ -0.68
TRIM4-201ENST00000349062 H3BRN7 92 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 TRBV12-3P01733 135 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 Q86TA4 180 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 RAB37Q96AX2 223 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 RPP21Q9H633 154 aaKnown RBP10.82□□□□□ -0.68
TRIM4-201ENST00000349062 IGHV1-69DA0A0B4J2H0 117 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 K7EQM0 130 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 IGHV1-69P01742 117 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 CT45A10P0DMU9 189 aa10.82□□□□□ -0.68
TRIM4-201ENST00000349062 LOC389332A0A1B0GUA5 103 aa10.81□□□□□ -0.68
TRIM4-201ENST00000349062 WFDC12Q8WWY7 111 aa10.81□□□□□ -0.68
TRIM4-201ENST00000349062 GRAMD2BQ96HH9 432 aa10.81□□□□□ -0.68
TRIM4-201ENST00000349062 C2orf70A6NJV1 201 aa10.81□□□□□ -0.68
TRIM4-201ENST00000349062 CDKN1BP46527 198 aa10.81□□□□□ -0.68
TRIM4-201ENST00000349062 KRTAP10-9P60411 292 aa10.81□□□□□ -0.68
TRIM4-201ENST00000349062 C1orf122Q6ZSJ8 110 aa10.81□□□□□ -0.68
TRIM4-201ENST00000349062 TTC9CQ8N5M4 171 aa10.81□□□□□ -0.68
TRIM4-201ENST00000349062 C10orf105Q8TEF2 133 aa10.81□□□□□ -0.68
TRIM4-201ENST00000349062 GTSF1Q8WW33 167 aa10.81□□□□□ -0.68
TRIM4-201ENST00000349062 ZNF414Q96IQ9 312 aa10.81□□□□□ -0.68
TRIM4-201ENST00000349062 VGLL1Q99990 258 aa10.81□□□□□ -0.68
TRIM4-201ENST00000349062 RNF223E7ERA6 249 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 OVOL3O00110 214 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 FMC1Q96HJ9 113 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 AJUBAQ96IF1 538 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 TMEM191AQ9H0A3 160 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 SIGLEC15Q6ZMC9 328 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 WFDC3Q8IUB2 231 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 KLK15Q9H2R5 256 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 A8MWL6 223 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 SYS1-DBNDD2H3BUS1 97 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 ORM1P02763 201 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 MYCNOSP40205 109 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 OCIAD2Q56VL3 154 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 Q8N6K4 173 aa10.8□□□□□ -0.68
TRIM4-201ENST00000349062 ITPR3Q14573 2671 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 TRAV30A0A087WSZ9 112 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 TRAV41A0A0B4J266 112 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 SPRY2O43597 315 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 COX6B1P14854 86 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 ANKRD39Q53RE8 183 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 OR8A1Q8NGG7 326 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 MAP1LC3CQ9BXW4 147 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 GOSR1O95249 250 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 MSMBP08118 114 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 HBBP68871 147 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 ATP5G2Q06055 141 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 ITPR2Q14571 2701 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 IGHV1-24A0A0C4DH33 117 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 GAGE12BA1L429 117 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 PRAC2D3DTV9 90 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 TAX1BP3O14907 124 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 PSG9Q00887 426 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 GLMPQ8WWB7 406 aa10.79□□□□□ -0.68
TRIM4-201ENST00000349062 ARMS2P0C7Q2 107 aa10.78□□□□□ -0.68
TRIM4-201ENST00000349062 TM4SF20Q53R12 229 aa10.78□□□□□ -0.68
TRIM4-201ENST00000349062 SMIM15Q7Z3B0 74 aa10.78□□□□□ -0.68
TRIM4-201ENST00000349062 SAP30O75446 220 aa10.78□□□□□ -0.68
TRIM4-201ENST00000349062 SCGB2A1O75556 95 aa10.78□□□□□ -0.68
TRIM4-201ENST00000349062 RPL7P18124 248 aaKnown RBP10.78□□□□□ -0.68
TRIM4-201ENST00000349062 PLP1P60201 277 aa10.78□□□□□ -0.68
TRIM4-201ENST00000349062 BVES-AS1Q5T3Y7 98 aa10.78□□□□□ -0.68
TRIM4-201ENST00000349062 C10orf99Q6UWK7 81 aa10.78□□□□□ -0.68
TRIM4-201ENST00000349062 C5orf56Q8N8D9 126 aa10.78□□□□□ -0.68
TRIM4-201ENST00000349062 MEGF9Q9H1U4 602 aa10.78□□□□□ -0.68
TRIM4-201ENST00000349062 OOSP1A8MZH6 123 aa10.77□□□□□ -0.68
TRIM4-201ENST00000349062 CCDC140Q96MF4 163 aa10.77□□□□□ -0.68
TRIM4-201ENST00000349062 APCP25054 2843 aa10.77□□□□□ -0.68
TRIM4-201ENST00000349062 TRAV8-6A0A0B4J262 113 aa10.77□□□□□ -0.69
TRIM4-201ENST00000349062 GAGE10A6NGK3 116 aa10.77□□□□□ -0.69
TRIM4-201ENST00000349062 FBLL1A6NHQ2 334 aaKnown RBP10.77□□□□□ -0.69
TRIM4-201ENST00000349062 LTAP01374 205 aa10.77□□□□□ -0.69
TRIM4-201ENST00000349062 IL17RELQ6ZVW7 336 aa10.77□□□□□ -0.69
TRIM4-201ENST00000349062 PRSS3P2Q8NHM4 247 aa10.77□□□□□ -0.69
TRIM4-201ENST00000349062 FOXE3Q13461 319 aa10.77□□□□□ -0.69
TRIM4-201ENST00000349062 MOB4Q9Y3A3 225 aa10.77□□□□□ -0.69
TRIM4-201ENST00000349062 JMJD1CQ15652 2540 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms