RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 HHLA3Q9XRX5 114 aa8.76□□□□□ -1.01
CCDC87-201ENST00000333861 COX7A1P24310 79 aa8.75□□□□□ -1.01
CCDC87-201ENST00000333861 TWIST1Q15672 202 aa8.75□□□□□ -1.01
CCDC87-201ENST00000333861 SLC25A48Q6ZT89 311 aaKnown RBP8.75□□□□□ -1.01
CCDC87-201ENST00000333861 GFRA4Q9GZZ7 299 aa8.75□□□□□ -1.01
CCDC87-201ENST00000333861 ZNF492Q9P255 531 aa8.75□□□□□ -1.01
CCDC87-201ENST00000333861 CTSZQ9UBR2 303 aa8.75□□□□□ -1.01
CCDC87-201ENST00000333861 FAM90A27PA6NNH2 459 aa8.75□□□□□ -1.01
CCDC87-201ENST00000333861 NPIPB5A8MRT5 1133 aa8.75□□□□□ -1.01
CCDC87-201ENST00000333861 CT83Q5H943 113 aa8.75□□□□□ -1.01
CCDC87-201ENST00000333861 IGF2-ASQ6U949 168 aa8.75□□□□□ -1.01
CCDC87-201ENST00000333861 ORMDL3Q8N138 153 aa8.75□□□□□ -1.01
CCDC87-201ENST00000333861 HIST1H4GQ99525 98 aa8.75□□□□□ -1.01
CCDC87-201ENST00000333861 CDIP1Q9H305 208 aa8.75□□□□□ -1.01
CCDC87-201ENST00000333861 FBXL15Q9H469 300 aa8.75□□□□□ -1.01
CCDC87-201ENST00000333861 TRAV26-2A0A0B4J265 109 aa8.74□□□□□ -1.01
CCDC87-201ENST00000333861 TMEM8BA6NDV4 472 aa8.74□□□□□ -1.01
CCDC87-201ENST00000333861 NDUFA3O95167 84 aa8.74□□□□□ -1.01
CCDC87-201ENST00000333861 PSG8Q9UQ74 426 aa8.74□□□□□ -1.01
CCDC87-201ENST00000333861 SIVA1O15304 175 aa8.74□□□□□ -1.01
CCDC87-201ENST00000333861 IGHV1-46P01743 117 aa8.74□□□□□ -1.01
CCDC87-201ENST00000333861 CACNG8Q8WXS5 425 aa8.74□□□□□ -1.01
CCDC87-201ENST00000333861 MRPL16Q9NX20 251 aaKnown RBP8.74□□□□□ -1.01
CCDC87-201ENST00000333861 IGHV3-49A0A0A0MS15 119 aa8.74□□□□□ -1.01
CCDC87-201ENST00000333861 KIR2DL4Q99706 377 aa8.74□□□□□ -1.01
CCDC87-201ENST00000333861 CYSLTR1Q9Y271 337 aa8.74□□□□□ -1.01
CCDC87-201ENST00000333861 SPTAN1Q13813 2472 aaKnown RBP8.74□□□□□ -1.01
CCDC87-201ENST00000333861 LOC107984156A0A0G2JMH3 177 aa8.73□□□□□ -1.01
CCDC87-201ENST00000333861 ODF1Q14990 250 aa8.73□□□□□ -1.01
CCDC87-201ENST00000333861 FAM104BQ5XKR9 115 aa8.73□□□□□ -1.01
CCDC87-201ENST00000333861 TMEM200BQ69YZ2 307 aa8.73□□□□□ -1.01
CCDC87-201ENST00000333861 ZFP2Q6ZN57 461 aa8.73□□□□□ -1.01
CCDC87-201ENST00000333861 ARL17AQ8IVW1 177 aa8.73□□□□□ -1.01
CCDC87-201ENST00000333861 RNF7Q9UBF6 113 aa8.73□□□□□ -1.01
CCDC87-201ENST00000333861 PRSS29PA6NIE9 313 aa8.73□□□□□ -1.01
CCDC87-201ENST00000333861 SMCPP49901 116 aaPredicted RBP8.73□□□□□ -1.01
CCDC87-201ENST00000333861 TCTEX1D4Q5JR98 221 aa8.73□□□□□ -1.01
CCDC87-201ENST00000333861 SLC25A39Q9BZJ4 359 aaPredicted RBP8.73□□□□□ -1.01
CCDC87-201ENST00000333861 PRO0461Q9UI25 63 aa8.73□□□□□ -1.01
CCDC87-201ENST00000333861 COL6A6A6NMZ7 2263 aa8.72□□□□□ -1.01
CCDC87-201ENST00000333861 K7EM74 188 aa8.72□□□□□ -1.01
CCDC87-201ENST00000333861 PSMB2P49721 201 aa8.72□□□□□ -1.01
CCDC87-201ENST00000333861 FOXI1Q12951 378 aa8.72□□□□□ -1.01
CCDC87-201ENST00000333861 PLGLAQ15195 96 aa8.72□□□□□ -1.01
CCDC87-201ENST00000333861 UFC1Q9Y3C8 167 aa8.72□□□□□ -1.01
CCDC87-201ENST00000333861 CNIH1O95406 144 aa8.72□□□□□ -1.01
CCDC87-201ENST00000333861 IGKCP01834 107 aa8.72□□□□□ -1.01
CCDC87-201ENST00000333861 ZNF474Q6S9Z5 364 aaPredicted RBP8.72□□□□□ -1.01
CCDC87-201ENST00000333861 MRPL35Q9NZE8 188 aaKnown RBP8.72□□□□□ -1.01
CCDC87-201ENST00000333861 LINC00312Q9Y6C7 94 aa8.72□□□□□ -1.01
CCDC87-201ENST00000333861 TRBV20-1A0A075B6N2 111 aa8.71□□□□□ -1.01
CCDC87-201ENST00000333861 H3BVH4 76 aa8.71□□□□□ -1.01
CCDC87-201ENST00000333861 IGLV2-23P01705 113 aa8.71□□□□□ -1.01
CCDC87-201ENST00000333861 ZNF80P51504 273 aaPredicted RBP8.71□□□□□ -1.01
CCDC87-201ENST00000333861 DPF1Q92782 380 aa8.71□□□□□ -1.01
CCDC87-201ENST00000333861 HIGD1AQ9Y241 93 aa8.71□□□□□ -1.01
CCDC87-201ENST00000333861 ERCC8Q13216 396 aa8.71□□□□□ -1.02
CCDC87-201ENST00000333861 SEM1Q6ZVN7 128 aa8.71□□□□□ -1.02
CCDC87-201ENST00000333861 TMEM158Q8WZ71 300 aa8.71□□□□□ -1.02
CCDC87-201ENST00000333861 ANAPC13Q9BS18 74 aa8.71□□□□□ -1.02
CCDC87-201ENST00000333861 ZNF71Q9NQZ8 489 aaPredicted RBP8.71□□□□□ -1.02
CCDC87-201ENST00000333861 PROCRQ9UNN8 238 aa8.71□□□□□ -1.02
CCDC87-201ENST00000333861 IL4P05112 153 aa8.7□□□□□ -1.02
CCDC87-201ENST00000333861 PAX8Q06710 450 aa8.7□□□□□ -1.02
CCDC87-201ENST00000333861 POU2AF1Q16633 256 aa8.7□□□□□ -1.02
CCDC87-201ENST00000333861 MRGPRG-AS1Q2M3A8 158 aa8.7□□□□□ -1.02
CCDC87-201ENST00000333861 Q6ZUT4 128 aa8.7□□□□□ -1.02
CCDC87-201ENST00000333861 PGPEP1Q9NXJ5 209 aa8.7□□□□□ -1.02
CCDC87-201ENST00000333861 LY6HO94772 140 aa8.7□□□□□ -1.02
CCDC87-201ENST00000333861 LHBP01229 141 aa8.7□□□□□ -1.02
CCDC87-201ENST00000333861 EFNA4P52798 201 aa8.7□□□□□ -1.02
CCDC87-201ENST00000333861 RAXQ9Y2V3 346 aa8.7□□□□□ -1.02
CCDC87-201ENST00000333861 C3orf56Q8N813 242 aa8.7□□□□□ -1.02
CCDC87-201ENST00000333861 MSRB2Q9Y3D2 182 aa8.7□□□□□ -1.02
CCDC87-201ENST00000333861 SLC25A15Q9Y619 301 aa8.7□□□□□ -1.02
CCDC87-201ENST00000333861 ORM1P02763 201 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 EMP1P54849 157 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 HERV-K104P63124 156 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 RRN3P1Q2M238 152 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 TM2D2Q9BX73 214 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 DKK4Q9UBT3 224 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 ACACBO00763 2458 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 TRAV17A0A0B4J275 112 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 SH2D1AO60880 128 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 CT45A10P0DMU9 189 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 EGR2P11161 476 aaPredicted RBP8.69□□□□□ -1.02
CCDC87-201ENST00000333861 RPL27AP46776 148 aaKnown RBP8.69□□□□□ -1.02
CCDC87-201ENST00000333861 SUB1P53999 127 aaKnown RBP eCLIP8.69□□□□□ -1.02
CCDC87-201ENST00000333861 CFAP161Q6P656 301 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 THAP8Q8NA92 274 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 OR4C13Q8NGP0 309 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 C8orf46Q8TAG6 207 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 OTORQ9NRC9 128 aa8.69□□□□□ -1.02
CCDC87-201ENST00000333861 HLA-DRB4P13762 266 aa8.68□□□□□ -1.02
CCDC87-201ENST00000333861 HLA-DRB4X5D2U9 266 aa8.68□□□□□ -1.02
CCDC87-201ENST00000333861 CRYBG3Q68DQ2 2970 aa8.68□□□□□ -1.02
CCDC87-201ENST00000333861 LINC01549A6NIU2 74 aa8.68□□□□□ -1.02
CCDC87-201ENST00000333861 SMIM20Q8N5G0 67 aa8.68□□□□□ -1.02
CCDC87-201ENST00000333861 TTC9CQ8N5M4 171 aa8.68□□□□□ -1.02
CCDC87-201ENST00000333861 RNF182Q8N6D2 247 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms