RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ATP5G1P05496 136 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 Q8N8P6 123 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 IGKV3D-15A0A087WSY6 115 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 NBR2O15453 112 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 COLCA1Q6ZS62 124 aa5.73□□□□□ -1.49
SMC1A-201ENST00000322213 ZNF581Q9P0T4 197 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 CD7P09564 240 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 CECR9P0C854 216 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 SIGLEC15Q6ZMC9 328 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 IGLV3-12A0A075B6K2 115 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 VCYO14598 125 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 LSM4Q9Y4Z0 139 aaKnown RBP5.72□□□□□ -1.49
SMC1A-201ENST00000322213 TRAV3A0A0B4J244 114 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 IGKV1-6A0A0C4DH72 117 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 NPC2P61916 151 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 FOXI1Q12951 378 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 SMRP1Q8NCR6 262 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 SPATA25Q9BR10 227 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 SRSF8Q9BRL6 282 aaKnown RBP5.72□□□□□ -1.49
SMC1A-201ENST00000322213 A0A1W2PPI3 338 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 NDUFS7O75251 213 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 SRD5A1P18405 259 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 DCTN5Q9BTE1 182 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 ZNHIT1O43257 154 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 NPYP01303 97 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 PHLDA1Q8WV24 401 aaPredicted RBP5.72□□□□□ -1.49
SMC1A-201ENST00000322213 LAMA2P24043 3122 aaKnown RBP5.72□□□□□ -1.49
SMC1A-201ENST00000322213 AMTNQ6UX39 209 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 TMEM14CQ9P0S9 112 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 TRANK1O15050 2925 aa5.72□□□□□ -1.49
SMC1A-201ENST00000322213 NUPR1O60356 82 aa5.71□□□□□ -1.49
SMC1A-201ENST00000322213 RFPL3SP0C7P2 107 aa5.71□□□□□ -1.49
SMC1A-201ENST00000322213 SPANXB1Q9NS25 103 aaPredicted RBP5.71□□□□□ -1.49
SMC1A-201ENST00000322213 PLA2G2EQ9NZK7 142 aa5.71□□□□□ -1.49
SMC1A-201ENST00000322213 CD24P25063 80 aa5.71□□□□□ -1.49
SMC1A-201ENST00000322213 PCP2Q8IVA1 136 aa5.71□□□□□ -1.49
SMC1A-201ENST00000322213 GLMPQ8WWB7 406 aa5.71□□□□□ -1.49
SMC1A-201ENST00000322213 TMEM86BQ8N661 226 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 MRAPQ8TCY5 172 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 ZNF747Q9BV97 191 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 SH2D6Q7Z4S9 175 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 C15orf53Q8NAA6 179 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 IGKV3-15P01624 115 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 CCL4P13236 92 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 FOXF2Q12947 444 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 PRR31Q5SQ13 230 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 ARTNQ5T4W7 220 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 GGNQ86UU5 652 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 DDB2Q92466 427 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 TRBV25-1A0A075B6N4 114 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 A0A087WX48 190 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 ATOX1O00244 68 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 WNT2P09544 360 aa5.71□□□□□ -1.5
SMC1A-201ENST00000322213 A0A1W2PR77 199 aa5.7□□□□□ -1.5
SMC1A-201ENST00000322213 SLC25A45Q8N413 288 aa5.7□□□□□ -1.5
SMC1A-201ENST00000322213 RNASE2P10153 161 aaKnown RBP5.7□□□□□ -1.5
SMC1A-201ENST00000322213 FXYD5Q96DB9 178 aa5.7□□□□□ -1.5
SMC1A-201ENST00000322213 ZC2HC1AQ96GY0 325 aa5.7□□□□□ -1.5
SMC1A-201ENST00000322213 IGF2RP11717 2491 aa5.7□□□□□ -1.5
SMC1A-201ENST00000322213 SRRM5B3KS81 715 aa5.7□□□□□ -1.5
SMC1A-201ENST00000322213 WFDC2Q14508 124 aa5.7□□□□□ -1.5
SMC1A-201ENST00000322213 SPAARA0A1B0GVQ0 90 aa5.7□□□□□ -1.5
SMC1A-201ENST00000322213 C8orf49Q96NF6 230 aa5.7□□□□□ -1.5
SMC1A-201ENST00000322213 IGLL5B9A064 214 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 PSPNO60542 156 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 TFF2Q03403 129 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 FOXL2NBQ6ZUU3 175 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 CARD19Q96LW7 228 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 SHANK2-AS3Q9BTD1 123 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 MRPL35Q9NZE8 188 aaKnown RBP5.69□□□□□ -1.5
SMC1A-201ENST00000322213 FAM236AA0A1B0GUQ0 79 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 FAM236BA0A1B0GV22 79 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 E9PLN8 166 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 IGLV3-1P01715 115 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 CRYGCP07315 174 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 ZFP36L1Q07352 338 aaKnown RBP5.69□□□□□ -1.5
SMC1A-201ENST00000322213 IGF2BP2-AS1Q96M15 143 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 NDUFA4L2Q9NRX3 87 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 IGHV3-66A0A0C4DH42 116 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 C5orf63A6NC05 138 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 RPUSD1Q9UJJ7 312 aaKnown RBP5.69□□□□□ -1.5
SMC1A-201ENST00000322213 NDUFC2O95298 119 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 TMEM258P61165 79 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 MGAQ8IWI9 3026 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 IGHV1-2P23083 117 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 ZNF493Q6ZR52 646 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 DKK2Q9UBU2 259 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 IGLV3-19P01714 112 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 IGHV3-23P01764 117 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 SPATA12Q7Z6I5 190 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 IGKV1-16P04430 117 aa5.69□□□□□ -1.5
SMC1A-201ENST00000322213 PPIFP30405 207 aaKnown RBP5.69□□□□□ -1.5
SMC1A-201ENST00000322213 OVOL1O14753 267 aa5.68□□□□□ -1.5
SMC1A-201ENST00000322213 SRSF2Q01130 221 aaKnown RBP5.68□□□□□ -1.5
SMC1A-201ENST00000322213 EPG5Q9HCE0 2579 aa5.68□□□□□ -1.5
SMC1A-201ENST00000322213 MT-ATP8P03928 68 aa5.68□□□□□ -1.5
SMC1A-201ENST00000322213 Q8TAT8 98 aa5.68□□□□□ -1.5
SMC1A-201ENST00000322213 TRBV7-1A0A0A6YYK4 115 aa5.68□□□□□ -1.5
SMC1A-201ENST00000322213 TRAV13-1A0A0B4J241 112 aa5.68□□□□□ -1.5
SMC1A-201ENST00000322213 IMMP1LQ96LU5 166 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms