RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CCDC144NLQ6NUI1 221 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 RNF125Q96EQ8 232 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 SPAG8Q99932 426 aaPredicted RBP7.57□□□□□ -1.2
PTPRA-202ENST00000318266 SPANXB1Q9NS25 103 aaPredicted RBP7.57□□□□□ -1.2
PTPRA-202ENST00000318266 IGKCP01834 107 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 CD40P25942 277 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 PAX8Q06710 450 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 FAM169BQ8N8A8 192 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 MAPKAPK5-AS1Q8N8E1 139 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 TMEM158Q8WZ71 300 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 MAP1LC3AQ9H492 121 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 U3KQK5 164 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 ACACAQ13085 2346 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 ZGRF1Q86YA3 2104 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 COL27A1Q8IZC6 1860 aaPredicted RBP7.57□□□□□ -1.2
PTPRA-202ENST00000318266 A0A1B0GV72 72 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 I3L2K1 104 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 RAB9AP51151 201 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 CHD6Q8TD26 2715 aa7.57□□□□□ -1.2
PTPRA-202ENST00000318266 TRAV17A0A0B4J275 112 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 IGHV1-8P0DP01 117 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 LOXP28300 417 aaPredicted RBP7.56□□□□□ -1.2
PTPRA-202ENST00000318266 CEND1Q8N111 149 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 ZNF491Q8N8L2 437 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 GATD1Q8NB37 220 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 PHLDA1Q8WV24 401 aaPredicted RBP7.56□□□□□ -1.2
PTPRA-202ENST00000318266 BBC3Q96PG8 261 aaPredicted RBP7.56□□□□□ -1.2
PTPRA-202ENST00000318266 ATP6V0BQ99437 205 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 ATRXP46100 2492 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 IGLL5B9A064 214 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 H3BRN7 92 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 NDUFA3O95167 84 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 CEACAM3P40198 252 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 HIST1H4GQ99525 98 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 MRPL35Q9NZE8 188 aaKnown RBP7.56□□□□□ -1.2
PTPRA-202ENST00000318266 C17orf100A8MU93 164 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 SH3BGRL2Q9UJC5 107 aa7.56□□□□□ -1.2
PTPRA-202ENST00000318266 TRAV26-2A0A0B4J265 109 aa7.55□□□□□ -1.2
PTPRA-202ENST00000318266 J3QR89 54 aa7.55□□□□□ -1.2
PTPRA-202ENST00000318266 K7EIM0 57 aa7.55□□□□□ -1.2
PTPRA-202ENST00000318266 PRRG2O14669 202 aa7.55□□□□□ -1.2
PTPRA-202ENST00000318266 TNFRSF6BO95407 300 aa7.55□□□□□ -1.2
PTPRA-202ENST00000318266 CKS1BP61024 79 aa7.55□□□□□ -1.2
PTPRA-202ENST00000318266 DEFB109BQ30KR1 87 aa7.55□□□□□ -1.2
PTPRA-202ENST00000318266 KLK15Q9H2R5 256 aa7.55□□□□□ -1.2
PTPRA-202ENST00000318266 RALYQ9UKM9 306 aaKnown RBP7.55□□□□□ -1.2
PTPRA-202ENST00000318266 FOXI2Q6ZQN5 318 aa7.55□□□□□ -1.2
PTPRA-202ENST00000318266 FAM215AQ9Y5M1 114 aa7.55□□□□□ -1.2
PTPRA-202ENST00000318266 APC2O95996 2303 aa7.55□□□□□ -1.2
PTPRA-202ENST00000318266 ABCA4P78363 2273 aa7.55□□□□□ -1.2
PTPRA-202ENST00000318266 LRBAP50851 2863 aa7.55□□□□□ -1.2
PTPRA-202ENST00000318266 IGHV1-3A0A0C4DH29 117 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 A0A1B0GWB2 263 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 TMEM178BH3BS89 294 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 DPM2O94777 84 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 ADIPOQQ15848 244 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 PRR25Q96S07 402 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 C20orf78Q9BR46 151 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 E9PLD3 99 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 LYNX1G3V0Z9 82 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 LYNX1P0DP58 116 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 EFNA4P52798 201 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 SRSF1Q07955 248 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTPRA-202ENST00000318266 ERCC8Q13216 396 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 C12orf74Q32Q52 190 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 GAGE13Q4V321 117 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 RPEQ96AT9 228 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 RNF185Q96GF1 192 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 ARHGAP32A7KAX9 2087 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 MBD3L4A6NDZ8 208 aaPredicted RBP7.54□□□□□ -1.2
PTPRA-202ENST00000318266 MBD3L3A6NE82 208 aaPredicted RBP7.54□□□□□ -1.2
PTPRA-202ENST00000318266 MBD3L5A6NJ08 208 aaPredicted RBP7.54□□□□□ -1.2
PTPRA-202ENST00000318266 MBD3L2Q8NHZ7 208 aaPredicted RBP7.54□□□□□ -1.2
PTPRA-202ENST00000318266 UFC1Q9Y3C8 167 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 SPTA1P02549 2419 aa7.54□□□□□ -1.2
PTPRA-202ENST00000318266 TRAV26-1A0A087WT03 109 aa7.53□□□□□ -1.2
PTPRA-202ENST00000318266 TRBV6-1A0A0K0K1D8 114 aa7.53□□□□□ -1.2
PTPRA-202ENST00000318266 F8W1H4 67 aa7.53□□□□□ -1.2
PTPRA-202ENST00000318266 K7EM74 188 aa7.53□□□□□ -1.2
PTPRA-202ENST00000318266 BMI1P35226 326 aa7.53□□□□□ -1.2
PTPRA-202ENST00000318266 TMEM155Q4W5P6 130 aa7.53□□□□□ -1.2
PTPRA-202ENST00000318266 MRPS12O15235 138 aaKnown RBP7.53□□□□□ -1.2
PTPRA-202ENST00000318266 LINC00311Q8N616 119 aa7.53□□□□□ -1.2
PTPRA-202ENST00000318266 HIGD1BQ9P298 99 aa7.53□□□□□ -1.2
PTPRA-202ENST00000318266 CYSLTR1Q9Y271 337 aa7.53□□□□□ -1.2
PTPRA-202ENST00000318266 ASH1LQ9NR48 2969 aaKnown RBP7.52□□□□□ -1.2
PTPRA-202ENST00000318266 IGHV3OR16-13A0A075B7E8 117 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 IGHV3-74A0A0B4J1X5 117 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 NDUFS8O00217 210 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 CRYGBP07316 175 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 BSPH1Q075Z2 132 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 PVRIGQ6DKI7 326 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 TTC9CQ8N5M4 171 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 TRGV3P03979 118 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 DLX6P56179 175 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 GFRALQ6UXV0 394 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 LYPD1Q8N2G4 141 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 TM2D2Q9BX73 214 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 DYNLRB1Q9NP97 96 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 AKAP13Q12802 2813 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms