RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PIP4P2Q8N4L2 257 aa10.26□□□□□ -0.77
CPNE1-201ENST00000317677 CACNG8Q8WXS5 425 aa10.26□□□□□ -0.77
CPNE1-201ENST00000317677 NDFIP1Q9BT67 221 aa10.26□□□□□ -0.77
CPNE1-201ENST00000317677 SPANXB1Q9NS25 103 aaPredicted RBP10.26□□□□□ -0.77
CPNE1-201ENST00000317677 RABAC1Q9UI14 185 aa10.26□□□□□ -0.77
CPNE1-201ENST00000317677 SOX21Q9Y651 276 aaPredicted RBP10.26□□□□□ -0.77
CPNE1-201ENST00000317677 OOSP1A8MZH6 123 aa10.25□□□□□ -0.77
CPNE1-201ENST00000317677 ACTL6BO94805 426 aa10.25□□□□□ -0.77
CPNE1-201ENST00000317677 CRYGCP07315 174 aa10.25□□□□□ -0.77
CPNE1-201ENST00000317677 SAA4P35542 130 aa10.25□□□□□ -0.77
CPNE1-201ENST00000317677 FOXE3Q13461 319 aa10.25□□□□□ -0.77
CPNE1-201ENST00000317677 SAMD5Q5TGI4 173 aa10.25□□□□□ -0.77
CPNE1-201ENST00000317677 ADAMTSL5Q6ZMM2 481 aa10.25□□□□□ -0.77
CPNE1-201ENST00000317677 FOXC2Q99958 501 aa10.25□□□□□ -0.77
CPNE1-201ENST00000317677 VGLL1Q99990 258 aa10.25□□□□□ -0.77
CPNE1-201ENST00000317677 ITPR3Q14573 2671 aa10.25□□□□□ -0.77
CPNE1-201ENST00000317677 HIVEP1P15822 2718 aa10.25□□□□□ -0.77
CPNE1-201ENST00000317677 CENPVL3A0A0U1RRI6 287 aa10.25□□□□□ -0.77
CPNE1-201ENST00000317677 SH2D7A6NKC9 451 aaPredicted RBP10.25□□□□□ -0.77
CPNE1-201ENST00000317677 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.24□□□□□ -0.77
CPNE1-201ENST00000317677 SUB1P53999 127 aaKnown RBP eCLIP10.24□□□□□ -0.771e-12■■■■□ 22.8
CPNE1-201ENST00000317677 NDPQ00604 133 aa10.24□□□□□ -0.77
CPNE1-201ENST00000317677 HES1Q14469 280 aa10.24□□□□□ -0.77
CPNE1-201ENST00000317677 PLGLAQ15195 96 aa10.24□□□□□ -0.77
CPNE1-201ENST00000317677 LCNL1Q6ZST4 164 aa10.24□□□□□ -0.77
CPNE1-201ENST00000317677 BLNKQ8WV28 456 aa10.24□□□□□ -0.77
CPNE1-201ENST00000317677 F11RQ9Y624 299 aaKnown RBP10.24□□□□□ -0.77
CPNE1-201ENST00000317677 THAP8Q8NA92 274 aa10.23□□□□□ -0.77
CPNE1-201ENST00000317677 ZNF418Q8TF45 676 aaPredicted RBP10.23□□□□□ -0.77
CPNE1-201ENST00000317677 NPIPB3Q92617 1050 aa10.23□□□□□ -0.77
CPNE1-201ENST00000317677 C19orf24Q9BVV8 132 aa10.23□□□□□ -0.77
CPNE1-201ENST00000317677 IGHV3-21A0A0B4J1V1 117 aa10.23□□□□□ -0.77
CPNE1-201ENST00000317677 SMIM13P0DJ93 91 aa10.23□□□□□ -0.77
CPNE1-201ENST00000317677 HBBP68871 147 aa10.23□□□□□ -0.77
CPNE1-201ENST00000317677 ASPHD1Q5U4P2 390 aa10.23□□□□□ -0.77
CPNE1-201ENST00000317677 MIR17HGQ75NE6 70 aa10.23□□□□□ -0.77
CPNE1-201ENST00000317677 SLC25A33Q9BSK2 321 aa10.23□□□□□ -0.77
CPNE1-201ENST00000317677 PRRC2AP48634 2157 aaKnown RBP10.22□□□□□ -0.77
CPNE1-201ENST00000317677 CELSR1Q9NYQ6 3014 aa10.22□□□□□ -0.77
CPNE1-201ENST00000317677 IGHV3OR16-10A0A075B7F0 116 aa10.22□□□□□ -0.77
CPNE1-201ENST00000317677 SMAD7O15105 426 aaKnown RBP10.22□□□□□ -0.77
CPNE1-201ENST00000317677 NPFFO15130 113 aa10.22□□□□□ -0.77
CPNE1-201ENST00000317677 CA1P00915 261 aaPredicted RBP10.22□□□□□ -0.77
CPNE1-201ENST00000317677 GTSF1Q8WW33 167 aa10.22□□□□□ -0.77
CPNE1-201ENST00000317677 ZNF355PQ9NSJ1 428 aa10.22□□□□□ -0.77
CPNE1-201ENST00000317677 A0A096LNT2 108 aa10.21□□□□□ -0.77
CPNE1-201ENST00000317677 GGTLC3B5MD39 225 aa10.21□□□□□ -0.77
CPNE1-201ENST00000317677 MORN5Q5VZ52 161 aa10.21□□□□□ -0.77
CPNE1-201ENST00000317677 ZNF503Q96F45 646 aa10.21□□□□□ -0.77
CPNE1-201ENST00000317677 SPAG8Q99932 426 aaPredicted RBP10.21□□□□□ -0.77
CPNE1-201ENST00000317677 ZNF747Q9BV97 191 aa10.21□□□□□ -0.77
CPNE1-201ENST00000317677 MAP1AP78559 2803 aaPredicted RBP10.21□□□□□ -0.77
CPNE1-201ENST00000317677 HIGD1CA8MV81 97 aa10.21□□□□□ -0.78
CPNE1-201ENST00000317677 I3L2K1 104 aa10.21□□□□□ -0.78
CPNE1-201ENST00000317677 CNIH1O95406 144 aa10.21□□□□□ -0.78
CPNE1-201ENST00000317677 PSMG4Q5JS54 123 aa10.21□□□□□ -0.78
CPNE1-201ENST00000317677 Q8N9W7 124 aa10.21□□□□□ -0.78
CPNE1-201ENST00000317677 TCRBV4S1A1TA0A5B7 111 aa10.2□□□□□ -0.78
CPNE1-201ENST00000317677 DEFB113Q30KQ7 82 aa10.2□□□□□ -0.78
CPNE1-201ENST00000317677 PATE2Q6UY27 113 aa10.2□□□□□ -0.78
CPNE1-201ENST00000317677 TTC9CQ8N5M4 171 aa10.2□□□□□ -0.78
CPNE1-201ENST00000317677 NAA38Q9BRA0 125 aaKnown RBP10.2□□□□□ -0.78
CPNE1-201ENST00000317677 SRSF8Q9BRL6 282 aaKnown RBP10.2□□□□□ -0.78
CPNE1-201ENST00000317677 BEX4Q9NWD9 120 aaPredicted RBP10.2□□□□□ -0.78
CPNE1-201ENST00000317677 ZFHX3Q15911 3703 aa10.2□□□□□ -0.78
CPNE1-201ENST00000317677 NCBP2LA6PVI3 153 aaKnown RBP10.19□□□□□ -0.78
CPNE1-201ENST00000317677 IGHV4-38-2P0DP08 117 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 EGR2P11161 476 aaPredicted RBP10.19□□□□□ -0.78
CPNE1-201ENST00000317677 CAMPP49913 170 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 TAS2R45P59539 299 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 CT83Q5H943 113 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 ZNF562Q6V9R5 426 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 BRD3OSQ6XYD6 125 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 GPR82Q96P67 336 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 MTORP42345 2549 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 ABCA1O95477 2261 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 IGHV7-81A0A0B4J1V7 117 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 TRAV40A0A0B4J280 105 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 IGHV1-69DA0A0B4J2H0 117 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 IGHV1-69P01742 117 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 KLF17Q5JT82 389 aaPredicted RBP10.19□□□□□ -0.78
CPNE1-201ENST00000317677 TMEM116Q8NCL8 245 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 RAB37Q96AX2 223 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 C7orf69Q9H7B7 122 aa10.19□□□□□ -0.78
CPNE1-201ENST00000317677 K7EIM0 57 aa10.18□□□□□ -0.78
CPNE1-201ENST00000317677 SNAI2O43623 268 aa10.18□□□□□ -0.78
CPNE1-201ENST00000317677 LGALS9BQ3B8N2 356 aa10.18□□□□□ -0.78
CPNE1-201ENST00000317677 LGALS9CQ6DKI2 356 aa10.18□□□□□ -0.78
CPNE1-201ENST00000317677 PIFOQ8TCI5 191 aa10.18□□□□□ -0.78
CPNE1-201ENST00000317677 ARPC1AQ92747 370 aa10.18□□□□□ -0.78
CPNE1-201ENST00000317677 FAM167A-AS1Q96KT0 104 aa10.18□□□□□ -0.78
CPNE1-201ENST00000317677 GFRA4Q9GZZ7 299 aa10.18□□□□□ -0.78
CPNE1-201ENST00000317677 HIGD1BQ9P298 99 aa10.18□□□□□ -0.78
CPNE1-201ENST00000317677 ERG28Q9UKR5 140 aa10.18□□□□□ -0.78
CPNE1-201ENST00000317677 SELENOKQ9Y6D0 94 aa10.18□□□□□ -0.78
CPNE1-201ENST00000317677 C2CD3Q4AC94 2353 aa10.18□□□□□ -0.78
CPNE1-201ENST00000317677 TRAV5A0A0B4J249 113 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 AVPP01185 164 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 MSMBP08118 114 aa10.17□□□□□ -0.78
CPNE1-201ENST00000317677 ZNF502Q8TBZ5 544 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms