RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 CRIP1P50238 77 aa11.28□□□□□ -0.6
GDF9-201ENST00000296875 Q8N976 141 aa11.28□□□□□ -0.6
GDF9-201ENST00000296875 FER1L6-AS1Q8NA97 138 aa11.28□□□□□ -0.6
GDF9-201ENST00000296875 TPPP3Q9BW30 176 aa11.28□□□□□ -0.6
GDF9-201ENST00000296875 TMEM191AQ9H0A3 160 aa11.28□□□□□ -0.6
GDF9-201ENST00000296875 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
GDF9-201ENST00000296875 SMAD5-AS1Q9Y6J3 95 aa11.28□□□□□ -0.6
GDF9-201ENST00000296875 ARHGAP32A7KAX9 2087 aa11.27□□□□□ -0.6
GDF9-201ENST00000296875 TRAV9-2A0A087WT02 112 aa11.27□□□□□ -0.61
GDF9-201ENST00000296875 B4DSR2 109 aa11.27□□□□□ -0.61
GDF9-201ENST00000296875 HSBP1L1C9JCN9 74 aa11.27□□□□□ -0.61
GDF9-201ENST00000296875 TRGV3P03979 118 aa11.27□□□□□ -0.61
GDF9-201ENST00000296875 HIST1H1AQ02539 215 aaPredicted RBP11.27□□□□□ -0.61
GDF9-201ENST00000296875 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.61
GDF9-201ENST00000296875 LINC00469Q8N7U9 141 aa11.27□□□□□ -0.61
GDF9-201ENST00000296875 PRSS3P2Q8NHM4 247 aa11.27□□□□□ -0.61
GDF9-201ENST00000296875 IGHV1-24A0A0C4DH33 117 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 IGHV4-61A0A0C4DH41 118 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 A0A0G2JLM5 398 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 G3V318 75 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 PPBPP02775 128 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 SLC25A16P16260 332 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 C19orf54Q5BKX5 351 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 LYZL1Q6UWQ5 148 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 PET117Q6UWS5 81 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 ORMDL3Q8N138 153 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 BCL6BQ8N143 479 aaPredicted RBP11.26□□□□□ -0.61
GDF9-201ENST00000296875 PPP1R14DQ9NXH3 145 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 LENEPQ9Y5L5 61 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 NDUFA4O00483 81 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 ARL3P36405 182 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 C9orf139Q6ZV77 190 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 OR10AG1Q8NH19 301 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 NRGNQ92686 78 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 ZNF580Q9UK33 172 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 LAMTOR2Q9Y2Q5 125 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 U3KQE9 123 aa11.26□□□□□ -0.61
GDF9-201ENST00000296875 ITPR2Q14571 2701 aa11.25□□□□□ -0.61
GDF9-201ENST00000296875 C2orf70A6NJV1 201 aa11.25□□□□□ -0.61
GDF9-201ENST00000296875 IGHG2P01859 326 aa11.25□□□□□ -0.61
GDF9-201ENST00000296875 KRTAP10-9P60411 292 aa11.25□□□□□ -0.61
GDF9-201ENST00000296875 SAMD13Q5VXD3 122 aa11.25□□□□□ -0.61
GDF9-201ENST00000296875 FAM104BQ5XKR9 115 aa11.25□□□□□ -0.61
GDF9-201ENST00000296875 CSMD2Q7Z408 3487 aa11.24□□□□□ -0.61
GDF9-201ENST00000296875 ORM1P02763 201 aa11.24□□□□□ -0.61
GDF9-201ENST00000296875 ZNF138P52744 262 aa11.24□□□□□ -0.61
GDF9-201ENST00000296875 LINC01559Q495D7 138 aa11.24□□□□□ -0.61
GDF9-201ENST00000296875 SMIM15Q7Z3B0 74 aa11.24□□□□□ -0.61
GDF9-201ENST00000296875 TMEM219Q86XT9 240 aa11.24□□□□□ -0.61
GDF9-201ENST00000296875 SNHG12Q9BXW3 62 aa11.24□□□□□ -0.61
GDF9-201ENST00000296875 U3KQK5 164 aa11.24□□□□□ -0.61
GDF9-201ENST00000296875 A0A1B0GV90 55 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 CLPSL1A2RUU4 121 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 SYS1-DBNDD2H3BUS1 97 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 HNRNPA3P51991 378 aaKnown RBP11.23□□□□□ -0.61
GDF9-201ENST00000296875 NUTF2P61970 127 aaKnown RBP11.23□□□□□ -0.61
GDF9-201ENST00000296875 EBLN2Q6P2I7 272 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 VGLL1Q99990 258 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 CNFNQ9BYD5 112 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 ST20Q9HBF5 79 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 VPS13CQ709C8 3753 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 IGHV3-35A0A0C4DH35 117 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 A6NDX4 124 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 RPLP1P05386 114 aaKnown RBP11.23□□□□□ -0.61
GDF9-201ENST00000296875 IGLC6P0CF74 106 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 IGLC3P0DOY3 106 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 TWIST1Q15672 202 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 TDRG1Q3Y452 100 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 C8orf86Q6ZUL3 223 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 PIFOQ8TCI5 191 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 PRELID3AQ96N28 172 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 RNF114Q9Y508 228 aa11.23□□□□□ -0.61
GDF9-201ENST00000296875 ABCA2Q9BZC7 2435 aa11.22□□□□□ -0.61
GDF9-201ENST00000296875 J3QLI3 93 aa11.22□□□□□ -0.61
GDF9-201ENST00000296875 Q6ZN92 141 aa11.22□□□□□ -0.61
GDF9-201ENST00000296875 C9orf47Q6ZRZ4 202 aa11.22□□□□□ -0.61
GDF9-201ENST00000296875 URB1-AS1Q96HZ7 61 aa11.22□□□□□ -0.61
GDF9-201ENST00000296875 C16orf92Q96LL3 132 aa11.22□□□□□ -0.61
GDF9-201ENST00000296875 WNK2Q9Y3S1 2297 aa11.22□□□□□ -0.61
GDF9-201ENST00000296875 TMSB15BA0A087X1C1 80 aa11.21□□□□□ -0.61
GDF9-201ENST00000296875 H3BUX3 64 aa11.21□□□□□ -0.61
GDF9-201ENST00000296875 EREGO14944 169 aa11.21□□□□□ -0.61
GDF9-201ENST00000296875 IGHG4P01861 327 aa11.21□□□□□ -0.61
GDF9-201ENST00000296875 BRD3OSQ6XYD6 125 aa11.21□□□□□ -0.61
GDF9-201ENST00000296875 Q8TAT8 98 aa11.21□□□□□ -0.61
GDF9-201ENST00000296875 MRPS16Q9Y3D3 137 aaKnown RBP11.21□□□□□ -0.61
GDF9-201ENST00000296875 OR4C46A6NHA9 309 aa11.21□□□□□ -0.62
GDF9-201ENST00000296875 LINC01548A6NM66 108 aa11.21□□□□□ -0.62
GDF9-201ENST00000296875 OVOL1O14753 267 aa11.21□□□□□ -0.62
GDF9-201ENST00000296875 CKS2P33552 79 aa11.21□□□□□ -0.62
GDF9-201ENST00000296875 COL5A1-AS1Q5SY13 56 aa11.21□□□□□ -0.62
GDF9-201ENST00000296875 SPATA12Q7Z6I5 190 aa11.21□□□□□ -0.62
GDF9-201ENST00000296875 LINC00477Q96M19 166 aa11.21□□□□□ -0.62
GDF9-201ENST00000296875 MS4A6AQ9H2W1 248 aa11.21□□□□□ -0.62
GDF9-201ENST00000296875 NOTCH2Q04721 2471 aa11.2□□□□□ -0.62
GDF9-201ENST00000296875 IGHV3OR16-10A0A075B7F0 116 aa11.2□□□□□ -0.62
GDF9-201ENST00000296875 IGHV4-30-2A0A087WSY4 118 aa11.2□□□□□ -0.62
GDF9-201ENST00000296875 D6R8Y8 96 aa11.2□□□□□ -0.62
GDF9-201ENST00000296875 GLMPQ8WWB7 406 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms