RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 RPEQ96AT9 228 aa8.17□□□□□ -1.1
ARHGEF3-201ENST00000296315 SLC25A15Q9Y619 301 aa8.17□□□□□ -1.1
ARHGEF3-201ENST00000296315 OTOGLQ3ZCN5 2332 aa8.17□□□□□ -1.1
ARHGEF3-201ENST00000296315 ZNF785A8K8V0 405 aa8.17□□□□□ -1.1
ARHGEF3-201ENST00000296315 PRR33A8MZF0 331 aa8.17□□□□□ -1.1
ARHGEF3-201ENST00000296315 SCGB1C2P0DMR2 95 aa8.17□□□□□ -1.1
ARHGEF3-201ENST00000296315 DEFB109BQ30KR1 87 aa8.17□□□□□ -1.1
ARHGEF3-201ENST00000296315 C12orf74Q32Q52 190 aa8.17□□□□□ -1.1
ARHGEF3-201ENST00000296315 ZNF833PQ6ZTB9 187 aa8.17□□□□□ -1.1
ARHGEF3-201ENST00000296315 TRBV19A0A075B6N1 114 aa8.16□□□□□ -1.1
ARHGEF3-201ENST00000296315 DPM2O94777 84 aa8.16□□□□□ -1.1
ARHGEF3-201ENST00000296315 CEND1Q8N111 149 aa8.16□□□□□ -1.1
ARHGEF3-201ENST00000296315 MYOZ3Q8TDC0 251 aa8.16□□□□□ -1.1
ARHGEF3-201ENST00000296315 RNF125Q96EQ8 232 aa8.16□□□□□ -1.1
ARHGEF3-201ENST00000296315 VKORC1Q9BQB6 163 aa8.16□□□□□ -1.1
ARHGEF3-201ENST00000296315 PGPEP1Q9NXJ5 209 aa8.16□□□□□ -1.1
ARHGEF3-201ENST00000296315 SMIM17P0DL12 118 aa8.16□□□□□ -1.1
ARHGEF3-201ENST00000296315 RALYQ9UKM9 306 aaKnown RBP8.16□□□□□ -1.1
ARHGEF3-201ENST00000296315 CD40P25942 277 aa8.16□□□□□ -1.1
ARHGEF3-201ENST00000296315 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.16□□□□□ -1.12e-7■■■□□ 14.6
ARHGEF3-201ENST00000296315 NCBP2LA6PVI3 153 aaKnown RBP8.15□□□□□ -1.1
ARHGEF3-201ENST00000296315 C16orf97H3BN30 126 aa8.15□□□□□ -1.1
ARHGEF3-201ENST00000296315 TNFRSF6BO95407 300 aa8.15□□□□□ -1.1
ARHGEF3-201ENST00000296315 GATA3P23771 443 aa8.15□□□□□ -1.1
ARHGEF3-201ENST00000296315 PPP1R27Q86WC6 154 aa8.15□□□□□ -1.1
ARHGEF3-201ENST00000296315 MT-ATP8P03928 68 aa8.15□□□□□ -1.1
ARHGEF3-201ENST00000296315 ZNF474Q6S9Z5 364 aaPredicted RBP8.15□□□□□ -1.1
ARHGEF3-201ENST00000296315 ZNF562Q6V9R5 426 aa8.15□□□□□ -1.1
ARHGEF3-201ENST00000296315 FOXI2Q6ZQN5 318 aa8.15□□□□□ -1.1
ARHGEF3-201ENST00000296315 LHBP01229 141 aa8.15□□□□□ -1.11
ARHGEF3-201ENST00000296315 IGKV1-17P01599 117 aa8.15□□□□□ -1.11
ARHGEF3-201ENST00000296315 ZNF80P51504 273 aaPredicted RBP8.15□□□□□ -1.11
ARHGEF3-201ENST00000296315 ODF1Q14990 250 aa8.15□□□□□ -1.11
ARHGEF3-201ENST00000296315 C1orf122Q6ZSJ8 110 aa8.15□□□□□ -1.11
ARHGEF3-201ENST00000296315 ZZEF1O43149 2961 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 MUC6Q6W4X9 2439 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 IGLV2-23P01705 113 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 CR1LQ2VPA4 569 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 MAP1AP78559 2803 aaPredicted RBP8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 IGKV3-7A0A075B6H7 116 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 OR11H12B2RN74 326 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 TM4SF5O14894 197 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 HLA-DRB4P13762 266 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 SIGLEC15Q6ZMC9 328 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 RNF182Q8N6D2 247 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 OR11H1Q8NG94 326 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 OR11H2Q8NH07 326 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 SIGLEC9Q9Y336 463 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 HLA-DRB4X5D2U9 266 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 C2CD3Q4AC94 2353 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 ATRXP46100 2492 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 LINC01549A6NIU2 74 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 IGLV1-44P01699 117 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 ONECUT1Q9UBC0 465 aa8.14□□□□□ -1.11
ARHGEF3-201ENST00000296315 SORL1Q92673 2214 aa8.13□□□□□ -1.11
ARHGEF3-201ENST00000296315 ANKHD1Q8IWZ3 2542 aaKnown RBP8.13□□□□□ -1.11
ARHGEF3-201ENST00000296315 TLN1Q9Y490 2541 aaKnown RBP8.13□□□□□ -1.11
ARHGEF3-201ENST00000296315 PRTN3P24158 256 aa8.13□□□□□ -1.11
ARHGEF3-201ENST00000296315 SPG11Q96JI7 2443 aa8.13□□□□□ -1.11
ARHGEF3-201ENST00000296315 MC5RP33032 325 aa8.13□□□□□ -1.11
ARHGEF3-201ENST00000296315 SPANXN1Q5VSR9 72 aa8.13□□□□□ -1.11
ARHGEF3-201ENST00000296315 WI2-2373I1.2A0A1W2PRP0 233 aa8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 F8W1H4 67 aa8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 Q6AWC8 147 aa8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 LINC01548A6NM66 108 aa8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 TRGV3P03979 118 aa8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 PRSS33Q8NF86 280 aa8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 RNF183Q96D59 192 aa8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 SHANK2-AS3Q9BTD1 123 aa8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 BEX4Q9NWD9 120 aaPredicted RBP8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 A0A1B0GW15 77 aa8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 SIVA1O15304 175 aa8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 HOXA3O43365 443 aaPredicted RBP8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 RPL7P18124 248 aaKnown RBP8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 ZFP2Q6ZN57 461 aa8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 C1orf162Q8NEQ5 155 aaPredicted RBP8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 COL12A1Q99715 3063 aa8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 RELNP78509 3460 aa8.12□□□□□ -1.11
ARHGEF3-201ENST00000296315 TRAV17A0A0B4J275 112 aa8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 M0R381 172 aa8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 MGPP08493 103 aa8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 MRAP2Q96G30 205 aa8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 ANAPC13Q9BS18 74 aa8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 PLSCR4Q9NRQ2 329 aa8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 CTSZQ9UBR2 303 aa8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 SVEP1Q4LDE5 3571 aa8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 B5MCH6 92 aa8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 KLHL30-AS1Q8NEE0 82 aa8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 CDX4O14627 284 aaPredicted RBP8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 Q6ZQT7 251 aa8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 KIR2DL4Q99706 377 aa8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 HHLA3Q9XRX5 114 aa8.11□□□□□ -1.11
ARHGEF3-201ENST00000296315 IGF2RP11717 2491 aa8.1□□□□□ -1.11
ARHGEF3-201ENST00000296315 ANKRD11Q6UB99 2663 aaPredicted RBP8.1□□□□□ -1.11
ARHGEF3-201ENST00000296315 TRBV20-1A0A075B6N2 111 aa8.1□□□□□ -1.11
ARHGEF3-201ENST00000296315 E9PLD3 99 aa8.1□□□□□ -1.11
ARHGEF3-201ENST00000296315 CD59P13987 128 aa8.1□□□□□ -1.11
ARHGEF3-201ENST00000296315 RRN3P1Q2M238 152 aa8.1□□□□□ -1.11
ARHGEF3-201ENST00000296315 ZNF491Q8N8L2 437 aa8.1□□□□□ -1.11
ARHGEF3-201ENST00000296315 PRR25Q96S07 402 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 255.8 ms