RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TMEM95Q3KNT9 176 aa11.43□□□□□ -0.58
TRAFD1-201ENST00000257604 MINOS1Q5TGZ0 78 aa11.43□□□□□ -0.58
TRAFD1-201ENST00000257604 MINOS1-NBL1R4GNA1 71 aa11.43□□□□□ -0.58
TRAFD1-201ENST00000257604 TGFAP01135 160 aa11.42□□□□□ -0.58
TRAFD1-201ENST00000257604 P01737 135 aa11.42□□□□□ -0.58
TRAFD1-201ENST00000257604 PAX2Q02962 417 aa11.42□□□□□ -0.58
TRAFD1-201ENST00000257604 Q6ZS46 218 aa11.42□□□□□ -0.58
TRAFD1-201ENST00000257604 C5orf17Q8NAS9 161 aa11.42□□□□□ -0.58
TRAFD1-201ENST00000257604 IGLV11-55A0A075B6I3 123 aa11.42□□□□□ -0.58
TRAFD1-201ENST00000257604 HIST1H1EP10412 219 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-201ENST00000257604 EGR2P11161 476 aaPredicted RBP11.42□□□□□ -0.58
TRAFD1-201ENST00000257604 RNF182Q8N6D2 247 aa11.42□□□□□ -0.58
TRAFD1-201ENST00000257604 ITPR2Q14571 2701 aa11.42□□□□□ -0.58
TRAFD1-201ENST00000257604 AVPP01185 164 aa11.41□□□□□ -0.58
TRAFD1-201ENST00000257604 KRTAP10-9P60411 292 aa11.41□□□□□ -0.58
TRAFD1-201ENST00000257604 SVIPQ8NHG7 77 aa11.41□□□□□ -0.58
TRAFD1-201ENST00000257604 GTSF1Q8WW33 167 aa11.41□□□□□ -0.58
TRAFD1-201ENST00000257604 GPR82Q96P67 336 aa11.41□□□□□ -0.58
TRAFD1-201ENST00000257604 IGHV1-24A0A0C4DH33 117 aa11.41□□□□□ -0.58
TRAFD1-201ENST00000257604 OVOL3O00110 214 aa11.41□□□□□ -0.58
TRAFD1-201ENST00000257604 LEPROTL1O95214 131 aa11.41□□□□□ -0.58
TRAFD1-201ENST00000257604 TOMM40O96008 361 aa11.41□□□□□ -0.58
TRAFD1-201ENST00000257604 PF4V1P10720 104 aa11.41□□□□□ -0.58
TRAFD1-201ENST00000257604 TM4SF20Q53R12 229 aa11.41□□□□□ -0.58
TRAFD1-201ENST00000257604 HIST2H2BDQ6DRA6 164 aa11.41□□□□□ -0.58
TRAFD1-201ENST00000257604 CTSGP08311 255 aa11.4□□□□□ -0.58
TRAFD1-201ENST00000257604 SHANK2-AS3Q9BTD1 123 aa11.4□□□□□ -0.58
TRAFD1-201ENST00000257604 NBPF19A0A087WUL8 3843 aa11.4□□□□□ -0.58
TRAFD1-201ENST00000257604 ITPR3Q14573 2671 aa11.4□□□□□ -0.58
TRAFD1-201ENST00000257604 TRGV3P03979 118 aa11.4□□□□□ -0.58
TRAFD1-201ENST00000257604 C1orf122Q6ZSJ8 110 aa11.4□□□□□ -0.58
TRAFD1-201ENST00000257604 C10orf105Q8TEF2 133 aa11.4□□□□□ -0.58
TRAFD1-201ENST00000257604 C8orf49Q96NF6 230 aa11.4□□□□□ -0.58
TRAFD1-201ENST00000257604 AAMDCQ9H7C9 122 aa11.4□□□□□ -0.58
TRAFD1-201ENST00000257604 RNF223E7ERA6 249 aa11.4□□□□□ -0.59
TRAFD1-201ENST00000257604 CHEK1O14757 476 aa11.4□□□□□ -0.59
TRAFD1-201ENST00000257604 COX6B1P14854 86 aa11.4□□□□□ -0.59
TRAFD1-201ENST00000257604 APCP25054 2843 aa11.4□□□□□ -0.59
TRAFD1-201ENST00000257604 IGHV1-69DA0A0B4J2H0 117 aa11.39□□□□□ -0.59
TRAFD1-201ENST00000257604 SYS1-DBNDD2H3BUS1 97 aa11.39□□□□□ -0.59
TRAFD1-201ENST00000257604 IGHV1-69P01742 117 aa11.39□□□□□ -0.59
TRAFD1-201ENST00000257604 APOHP02749 345 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-201ENST00000257604 HBBP68871 147 aa11.39□□□□□ -0.59
TRAFD1-201ENST00000257604 WIPF2Q8TF74 440 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-201ENST00000257604 RAB37Q96AX2 223 aa11.39□□□□□ -0.59
TRAFD1-201ENST00000257604 SRD5A1P18405 259 aa11.39□□□□□ -0.59
TRAFD1-201ENST00000257604 AJUBAQ96IF1 538 aa11.39□□□□□ -0.59
TRAFD1-201ENST00000257604 TRBV19A0A075B6N1 114 aa11.38□□□□□ -0.59
TRAFD1-201ENST00000257604 F8W735 103 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-201ENST00000257604 KLF5Q13887 457 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-201ENST00000257604 RABAC1Q9UI14 185 aa11.38□□□□□ -0.59
TRAFD1-201ENST00000257604 TRBV12-3P01733 135 aa11.38□□□□□ -0.59
TRAFD1-201ENST00000257604 FAM106AQ4KMX7 169 aa11.38□□□□□ -0.59
TRAFD1-201ENST00000257604 TTC9CQ8N5M4 171 aa11.38□□□□□ -0.59
TRAFD1-201ENST00000257604 OR8A1Q8NGG7 326 aa11.38□□□□□ -0.59
TRAFD1-201ENST00000257604 SERTM2A0A1B0GWG4 89 aa11.38□□□□□ -0.59
TRAFD1-201ENST00000257604 TAX1BP3O14907 124 aa11.38□□□□□ -0.59
TRAFD1-201ENST00000257604 MSMBP08118 114 aa11.38□□□□□ -0.59
TRAFD1-201ENST00000257604 DEFB1P60022 68 aa11.38□□□□□ -0.59
TRAFD1-201ENST00000257604 PVRIGQ6DKI7 326 aa11.38□□□□□ -0.59
TRAFD1-201ENST00000257604 HSBP1L1C9JCN9 74 aa11.37□□□□□ -0.59
TRAFD1-201ENST00000257604 ERCC8Q13216 396 aa11.37□□□□□ -0.59
TRAFD1-201ENST00000257604 FAM231DQ6ZW35 169 aa11.37□□□□□ -0.59
TRAFD1-201ENST00000257604 Q8N6K4 173 aa11.37□□□□□ -0.59
TRAFD1-201ENST00000257604 RPP21Q9H633 154 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-201ENST00000257604 NPIPB5A8MRT5 1133 aa11.37□□□□□ -0.59
TRAFD1-201ENST00000257604 H3BRN7 92 aa11.37□□□□□ -0.59
TRAFD1-201ENST00000257604 CSN1S1P47710 185 aa11.37□□□□□ -0.59
TRAFD1-201ENST00000257604 SLC25A34Q6PIV7 304 aa11.37□□□□□ -0.59
TRAFD1-201ENST00000257604 KLK15Q9H2R5 256 aa11.37□□□□□ -0.59
TRAFD1-201ENST00000257604 A0A1B0GXF2 115 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 SAP30O75446 220 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 NCR2O95944 276 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 PPIFP30405 207 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 BVES-AS1Q5T3Y7 98 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 PRSS57Q6UWY2 283 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 TMEM75Q8N9X5 138 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 CSTL1Q9H114 145 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 OTORQ9NRC9 128 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 TRAV41A0A0B4J266 112 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 K7EMI3 77 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 DEFB104AQ8WTQ1 72 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 ZNF414Q96IQ9 312 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 PSG8Q9UQ74 426 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 TRAV8-6A0A0B4J262 113 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 ZNF843Q8N446 348 aa11.36□□□□□ -0.59
TRAFD1-201ENST00000257604 TRAV30A0A087WSZ9 112 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 OOSP1A8MZH6 123 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 K7EP13 123 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 K7EQM0 130 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 RASL11AQ6T310 242 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 Q86TA4 180 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 C5orf56Q8N8D9 126 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 MEGF9Q9H1U4 602 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 MYCNOSP40205 109 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 ATP5G2Q06055 141 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 C10orf99Q6UWK7 81 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 SIGLEC15Q6ZMC9 328 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 IL17RELQ6ZVW7 336 aa11.35□□□□□ -0.59
TRAFD1-201ENST00000257604 WFDC12Q8WWY7 111 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms