RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 NPYP01303 97 aa9.4□□□□□ -0.9
CCNA1-201ENST00000255465 DRAM1Q8N682 238 aa9.4□□□□□ -0.9
CCNA1-201ENST00000255465 LINC00526Q96FQ7 95 aa9.4□□□□□ -0.9
CCNA1-201ENST00000255465 OBP2BQ9NPH6 170 aa9.4□□□□□ -0.9
CCNA1-201ENST00000255465 AMMECR1Q9Y4X0 333 aaPredicted RBP9.4□□□□□ -0.9
CCNA1-201ENST00000255465 NBPF19A0A087WUL8 3843 aa9.4□□□□□ -0.9
CCNA1-201ENST00000255465 PRR14LQ5THK1 2151 aa9.4□□□□□ -0.9
CCNA1-201ENST00000255465 FAM240AA0A1B0GVK7 77 aa9.4□□□□□ -0.91
CCNA1-201ENST00000255465 PEX7O00628 323 aa9.4□□□□□ -0.91
CCNA1-201ENST00000255465 LTAP01374 205 aa9.4□□□□□ -0.91
CCNA1-201ENST00000255465 COX6B1P14854 86 aa9.4□□□□□ -0.91
CCNA1-201ENST00000255465 FAM27E3Q08E93 113 aa9.4□□□□□ -0.91
CCNA1-201ENST00000255465 C19orf71A6NCJ1 209 aa9.39□□□□□ -0.91
CCNA1-201ENST00000255465 ATP5LO75964 103 aa9.39□□□□□ -0.91
CCNA1-201ENST00000255465 ACTL6BO94805 426 aa9.39□□□□□ -0.91
CCNA1-201ENST00000255465 CDAP32320 146 aa9.39□□□□□ -0.91
CCNA1-201ENST00000255465 RPL13AP40429 203 aaKnown RBP9.39□□□□□ -0.91
CCNA1-201ENST00000255465 RSPO1Q2MKA7 263 aaPredicted RBP9.39□□□□□ -0.91
CCNA1-201ENST00000255465 C9orf153Q5TBE3 101 aa9.39□□□□□ -0.91
CCNA1-201ENST00000255465 ANKRD29Q8N6D5 301 aa9.39□□□□□ -0.91
CCNA1-201ENST00000255465 HHLA3Q9XRX5 114 aa9.39□□□□□ -0.91
CCNA1-201ENST00000255465 U3KQK5 164 aa9.39□□□□□ -0.91
CCNA1-201ENST00000255465 CRYGSP22914 178 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 EIF4EBP1Q13541 118 aaPredicted RBP9.38□□□□□ -0.91
CCNA1-201ENST00000255465 TWIST1Q15672 202 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 KRTAP27-1Q3LI81 207 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 MIR17HGQ75NE6 70 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 MKXQ8IYA7 352 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 HIST1H4GQ99525 98 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 EMC6Q9BV81 110 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 FZR1Q9UM11 496 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 ANKHD1Q8IWZ3 2542 aaKnown RBP9.38□□□□□ -0.91
CCNA1-201ENST00000255465 TRAV8-2A0A0B4J237 113 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 LINC01546A6NGU7 62 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 MRPL33O75394 65 aaKnown RBP9.38□□□□□ -0.91
CCNA1-201ENST00000255465 P01737 135 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 CECR9P0C854 216 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 PSMB2P49721 201 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 TEX36Q5VZQ5 186 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 OR4C13Q8NGP0 309 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 CELSR2Q9HCU4 2923 aa9.38□□□□□ -0.91
CCNA1-201ENST00000255465 IGKCP01834 107 aa9.37□□□□□ -0.91
CCNA1-201ENST00000255465 GATA4P43694 442 aa9.37□□□□□ -0.91
CCNA1-201ENST00000255465 HERVK_113P63121 156 aa9.37□□□□□ -0.91
CCNA1-201ENST00000255465 PAX8Q06710 450 aa9.37□□□□□ -0.91
CCNA1-201ENST00000255465 C15orf53Q8NAA6 179 aa9.37□□□□□ -0.91
CCNA1-201ENST00000255465 LINC01560Q8TB33 94 aa9.37□□□□□ -0.91
CCNA1-201ENST00000255465 NPIPB3Q92617 1050 aa9.37□□□□□ -0.91
CCNA1-201ENST00000255465 ZNF503Q96F45 646 aa9.37□□□□□ -0.91
CCNA1-201ENST00000255465 MLST8Q9BVC4 326 aa9.37□□□□□ -0.91
CCNA1-201ENST00000255465 TRAV8-4A0A0B4J246 113 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 DPM2O94777 84 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 IGHV3-9P01782 118 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 IGLC6P0CF74 106 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 ZNF138P52744 262 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 ZNF493Q6ZR52 646 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 Q6ZT83 130 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 AAED1Q7RTV5 226 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 C10orf126Q8N4M7 172 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 PGLYRP4Q96LB8 373 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 NABP2Q9BQ15 211 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 CENPEQ02224 2701 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 A0A1B0GUT8 65 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 UBE2D1P51668 147 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 CXorf67Q86X51 503 aaPredicted RBP9.36□□□□□ -0.91
CCNA1-201ENST00000255465 ODF3Q96PU9 254 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 TRGV9Q99603 122 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 ABCA4P78363 2273 aa9.36□□□□□ -0.91
CCNA1-201ENST00000255465 HEATR1Q9H583 2144 aaKnown RBP9.35□□□□□ -0.91
CCNA1-201ENST00000255465 TRAV2A0A0B4J234 112 aa9.35□□□□□ -0.91
CCNA1-201ENST00000255465 DUTP33316 252 aaKnown RBP9.35□□□□□ -0.91
CCNA1-201ENST00000255465 C22orf34Q6ZV56 151 aa9.35□□□□□ -0.91
CCNA1-201ENST00000255465 ZNF329Q86UD4 541 aa9.35□□□□□ -0.91
CCNA1-201ENST00000255465 SSMEM1Q8WWF3 244 aa9.35□□□□□ -0.91
CCNA1-201ENST00000255465 C1orf159Q96HA4 380 aa9.35□□□□□ -0.91
CCNA1-201ENST00000255465 FMC1Q96HJ9 113 aa9.35□□□□□ -0.91
CCNA1-201ENST00000255465 DCHS2Q6V1P9 2916 aa9.35□□□□□ -0.91
CCNA1-201ENST00000255465 IGKV2D-26A0A0A0MRZ7 120 aa9.34□□□□□ -0.91
CCNA1-201ENST00000255465 LOC107984640A0A0U1RRK4 108 aa9.34□□□□□ -0.91
CCNA1-201ENST00000255465 WI2-2373I1.2A0A1W2PRP0 233 aa9.34□□□□□ -0.91
CCNA1-201ENST00000255465 LGALS1P09382 135 aaKnown RBP9.34□□□□□ -0.91
CCNA1-201ENST00000255465 IGHV1-2P23083 117 aa9.34□□□□□ -0.91
CCNA1-201ENST00000255465 HSPE1P61604 102 aaKnown RBP9.34□□□□□ -0.91
CCNA1-201ENST00000255465 TIMD4Q96H15 378 aa9.34□□□□□ -0.91
CCNA1-201ENST00000255465 ASCL2Q99929 193 aa9.34□□□□□ -0.91
CCNA1-201ENST00000255465 LYZL6O75951 148 aa9.34□□□□□ -0.91
CCNA1-201ENST00000255465 RFESDQ8TAC1 157 aa9.34□□□□□ -0.91
CCNA1-201ENST00000255465 NABP1Q96AH0 204 aa9.34□□□□□ -0.91
CCNA1-201ENST00000255465 PRO0628Q9UI54 55 aa9.34□□□□□ -0.91
CCNA1-201ENST00000255465 CRYGAP11844 174 aa9.33□□□□□ -0.92
CCNA1-201ENST00000255465 MALP21145 153 aa9.33□□□□□ -0.92
CCNA1-201ENST00000255465 FAM27BQ5VT28 67 aa9.33□□□□□ -0.92
CCNA1-201ENST00000255465 EPDR1Q9UM22 224 aa9.33□□□□□ -0.92
CCNA1-201ENST00000255465 TIMM8BQ9Y5J9 83 aaPredicted RBP9.33□□□□□ -0.92
CCNA1-201ENST00000255465 TRBV6-1A0A0K0K1D8 114 aa9.32□□□□□ -0.92
CCNA1-201ENST00000255465 NCBP2LA6PVI3 153 aaKnown RBP9.32□□□□□ -0.92
CCNA1-201ENST00000255465 TNFRSF6BO95407 300 aa9.32□□□□□ -0.92
CCNA1-201ENST00000255465 IFI27P40305 119 aaPredicted RBP9.32□□□□□ -0.92
CCNA1-201ENST00000255465 TMEM258P61165 79 aa9.32□□□□□ -0.92
CCNA1-201ENST00000255465 DKK2Q9UBU2 259 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms