RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 EFNA4P52798 201 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 SCRT2Q9NQ03 307 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 RPUSD1Q9UJJ7 312 aaKnown RBP9.06□□□□□ -0.96
MSH6-201ENST00000234420 RNASE8Q8TDE3 154 aaKnown RBP9.06□□□□□ -0.96
MSH6-201ENST00000234420 COL8A2P25067 703 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 LMO1P25800 156 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 TMEM30BQ3MIR4 351 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 PVRIGQ6DKI7 326 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 CNOT1A5YKK6 2376 aaKnown RBP9.06□□□□□ -0.96
MSH6-201ENST00000234420 C14orf132Q9NPU4 83 aa9.05□□□□□ -0.96
MSH6-201ENST00000234420 A0A1B0GW64 132 aa9.05□□□□□ -0.96
MSH6-201ENST00000234420 C20orf204Q6ZNR8 217 aa9.05□□□□□ -0.96
MSH6-201ENST00000234420 RPL36AP83881 106 aaKnown RBP9.05□□□□□ -0.96
MSH6-201ENST00000234420 GTSF1Q8WW33 167 aa9.05□□□□□ -0.96
MSH6-201ENST00000234420 RPL36ALQ969Q0 106 aaKnown RBP9.05□□□□□ -0.96
MSH6-201ENST00000234420 IGHV2-26A0A0B4J1V2 119 aa9.05□□□□□ -0.96
MSH6-201ENST00000234420 SPINK13Q1W4C9 94 aa9.05□□□□□ -0.96
MSH6-201ENST00000234420 VWC2Q2TAL6 325 aa9.05□□□□□ -0.96
MSH6-201ENST00000234420 RPP25LQ8N5L8 163 aaKnown RBP9.05□□□□□ -0.96
MSH6-201ENST00000234420 TMEM133Q9H2Q1 129 aa9.05□□□□□ -0.96
MSH6-201ENST00000234420 TREML4Q6UXN2 200 aa9.05□□□□□ -0.96
MSH6-201ENST00000234420 FNDC1Q4ZHG4 1894 aaPredicted RBP9.04□□□□□ -0.96
MSH6-201ENST00000234420 RNASE2P10153 161 aaKnown RBP9.04□□□□□ -0.96
MSH6-201ENST00000234420 SAA4P35542 130 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 PRR14LQ5THK1 2151 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 PINLYPA6NC86 204 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 HLA-DRB4P13762 266 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 DEFB136Q30KP8 78 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 C8orf31Q8N9H6 132 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 HLA-DRB4X5D2U9 266 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 IGKV1-8A0A0C4DH67 115 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 IGKV1-39P01597 117 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 IGKV1D-39P04432 117 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 ZNF837Q96EG3 531 aaPredicted RBP9.04□□□□□ -0.96
MSH6-201ENST00000234420 IGLL5B9A064 214 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 GAS1P54826 345 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 FAM90A1Q86YD7 464 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 SPATA25Q9BR10 227 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 ANAPC1Q9H1A4 1944 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 DEFB4AO15263 64 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 CFHR2P36980 270 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 ID3Q02535 119 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 Q0VG73 95 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 NMSQ5H8A3 153 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 C18orf32Q8TCD1 76 aa9.04□□□□□ -0.96
MSH6-201ENST00000234420 TM4SF5O14894 197 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 TMEM200BQ69YZ2 307 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 WDR83OSQ9Y284 106 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 EXPH5Q8NEV8 1989 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 IGHV1-24A0A0C4DH33 117 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 F6UB75 175 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 DTX1Q86Y01 620 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 TNRC6BQ9UPQ9 1833 aaKnown RBP9.03□□□□□ -0.96
MSH6-201ENST00000234420 LINC01619G3V211 115 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 C12orf74Q32Q52 190 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 ATOX1O00244 68 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 TP53TG1Q9Y2A0 90 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 HLA-DMBP28068 263 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 MUSTN1Q8IVN3 82 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 ZNF106Q9H2Y7 1883 aaKnown RBP9.03□□□□□ -0.96
MSH6-201ENST00000234420 NRXN3Q9Y4C0 1643 aa9.03□□□□□ -0.96
MSH6-201ENST00000234420 TRAV1-1A0A0B4J248 108 aa9.02□□□□□ -0.96
MSH6-201ENST00000234420 IGHV3-30P01768 117 aa9.02□□□□□ -0.97
MSH6-201ENST00000234420 IGHV3-33P01772 117 aa9.02□□□□□ -0.97
MSH6-201ENST00000234420 BAALC-AS2P0C853 105 aa9.02□□□□□ -0.97
MSH6-201ENST00000234420 IGHV3-30-3P0DP02 117 aa9.02□□□□□ -0.97
MSH6-201ENST00000234420 IGHV3-30-5P0DP03 117 aa9.02□□□□□ -0.97
MSH6-201ENST00000234420 LIME1Q9H400 295 aa9.02□□□□□ -0.97
MSH6-201ENST00000234420 CD59P13987 128 aa9.02□□□□□ -0.97
MSH6-201ENST00000234420 LINC00479Q96M42 142 aa9.02□□□□□ -0.97
MSH6-201ENST00000234420 WIPF3A6NGB9 483 aa9.02□□□□□ -0.97
MSH6-201ENST00000234420 ARMS2P0C7Q2 107 aa9.02□□□□□ -0.97
MSH6-201ENST00000234420 MST1P26927 711 aa9.02□□□□□ -0.97
MSH6-201ENST00000234420 TRPM3Q9HCF6 1732 aaPredicted RBP9.02□□□□□ -0.97
MSH6-201ENST00000234420 OVOL1O14753 267 aa9.02□□□□□ -0.97
MSH6-201ENST00000234420 PSMB8P28062 276 aa9.02□□□□□ -0.97
MSH6-201ENST00000234420 MSMBP08118 114 aa9.01□□□□□ -0.97
MSH6-201ENST00000234420 CDPF1Q6NVV7 123 aa9.01□□□□□ -0.97
MSH6-201ENST00000234420 TRBV6-7A0A0A0MS04 114 aa9.01□□□□□ -0.97
MSH6-201ENST00000234420 IGKV1-5P01602 117 aa9.01□□□□□ -0.97
MSH6-201ENST00000234420 SMIM2Q9BVW6 85 aa9.01□□□□□ -0.97
MSH6-201ENST00000234420 RNASE13Q5GAN3 156 aaKnown RBP9.01□□□□□ -0.97
MSH6-201ENST00000234420 IGFBPL1Q8WX77 278 aa9.01□□□□□ -0.97
MSH6-201ENST00000234420 TMEM213A2RRL7 107 aa9□□□□□ -0.97
MSH6-201ENST00000234420 PRCDQ00LT1 54 aa9□□□□□ -0.97
MSH6-201ENST00000234420 KLF5Q13887 457 aaPredicted RBP9□□□□□ -0.97
MSH6-201ENST00000234420 IGHV1-46P01743 117 aa9□□□□□ -0.97
MSH6-201ENST00000234420 CRYGCP07315 174 aa9□□□□□ -0.97
MSH6-201ENST00000234420 CMC4P56277 68 aaPredicted RBP9□□□□□ -0.97
MSH6-201ENST00000234420 M0R2N4 97 aa9□□□□□ -0.97
MSH6-201ENST00000234420 KLF2Q9Y5W3 355 aaPredicted RBP9□□□□□ -0.97
MSH6-201ENST00000234420 LYPD2Q6UXB3 125 aa9□□□□□ -0.97
MSH6-201ENST00000234420 LINC00312Q9Y6C7 94 aa9□□□□□ -0.97
MSH6-201ENST00000234420 COL18A1P39060 1754 aa9□□□□□ -0.97
MSH6-201ENST00000234420 A0A087WV48 116 aa8.99□□□□□ -0.97
MSH6-201ENST00000234420 IGKV1D-43A0A0B4J1Z2 117 aa8.99□□□□□ -0.97
MSH6-201ENST00000234420 C9JQL5 133 aa8.99□□□□□ -0.97
MSH6-201ENST00000234420 M0R1W7 72 aa8.99□□□□□ -0.97
MSH6-201ENST00000234420 C8orf86Q6ZUL3 223 aa8.99□□□□□ -0.97
MSH6-201ENST00000234420 CHCHD2Q9Y6H1 151 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms