RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 IGHV7-81A0A0B4J1V7 117 aa19.34■□□□□ 0.69
RUNDC3A-201ENST00000225441 NPSP0C0P6 89 aa19.34■□□□□ 0.69
RUNDC3A-201ENST00000225441 EGR2P11161 476 aaPredicted RBP19.34■□□□□ 0.69
RUNDC3A-201ENST00000225441 PAX8Q06710 450 aa19.34■□□□□ 0.69
RUNDC3A-201ENST00000225441 LOXL1Q08397 574 aaPredicted RBP19.34■□□□□ 0.69
RUNDC3A-201ENST00000225441 SLC25A34Q6PIV7 304 aa19.34■□□□□ 0.69
RUNDC3A-201ENST00000225441 LINC00173Q6ZV60 143 aa19.34■□□□□ 0.69
RUNDC3A-201ENST00000225441 KRTAP1-3Q8IUG1 177 aa19.34■□□□□ 0.69
RUNDC3A-201ENST00000225441 B4DSR2 109 aa19.33■□□□□ 0.69
RUNDC3A-201ENST00000225441 RELQ04864 619 aaPredicted RBP19.33■□□□□ 0.69
RUNDC3A-201ENST00000225441 LYZL1Q6UWQ5 148 aa19.33■□□□□ 0.69
RUNDC3A-201ENST00000225441 Q71RC1 249 aaPredicted RBP19.33■□□□□ 0.69
RUNDC3A-201ENST00000225441 DYNAPQ8N1N2 210 aa19.33■□□□□ 0.69
RUNDC3A-201ENST00000225441 ZNF747Q9BV97 191 aa19.33■□□□□ 0.69
RUNDC3A-201ENST00000225441 UBE2E1P51965 193 aa19.32■□□□□ 0.68
RUNDC3A-201ENST00000225441 ORMDL3Q8N138 153 aa19.32■□□□□ 0.68
RUNDC3A-201ENST00000225441 Q8N9W7 124 aa19.32■□□□□ 0.68
RUNDC3A-201ENST00000225441 NPFFR1Q9GZQ6 430 aa19.32■□□□□ 0.68
RUNDC3A-201ENST00000225441 CSMD2Q7Z408 3487 aa19.32■□□□□ 0.68
RUNDC3A-201ENST00000225441 RNF223E7ERA6 249 aa19.32■□□□□ 0.68
RUNDC3A-201ENST00000225441 HINT1P49773 126 aaPredicted RBP19.32■□□□□ 0.68
RUNDC3A-201ENST00000225441 ZNF738Q8NE65 137 aa19.32■□□□□ 0.68
RUNDC3A-201ENST00000225441 Q96MF0 132 aa19.32■□□□□ 0.68
RUNDC3A-201ENST00000225441 MED13LQ71F56 2210 aa19.31■□□□□ 0.68
RUNDC3A-201ENST00000225441 RBAKDNA6NC62 111 aa19.31■□□□□ 0.68
RUNDC3A-201ENST00000225441 SCRT2Q9NQ03 307 aa19.31■□□□□ 0.68
RUNDC3A-201ENST00000225441 S4R3C0 116 aa19.31■□□□□ 0.68
RUNDC3A-201ENST00000225441 A0A1W2PRD5 423 aa19.3■□□□□ 0.68
RUNDC3A-201ENST00000225441 A0A1W2PRF3 423 aa19.3■□□□□ 0.68
RUNDC3A-201ENST00000225441 A0A1W2PRM7 423 aa19.3■□□□□ 0.68
RUNDC3A-201ENST00000225441 FBLN7Q53RD9 439 aa19.3■□□□□ 0.68
RUNDC3A-201ENST00000225441 BCL6BQ8N143 479 aaPredicted RBP19.3■□□□□ 0.68
RUNDC3A-201ENST00000225441 COX11Q9Y6N1 276 aa19.3■□□□□ 0.68
RUNDC3A-201ENST00000225441 OR2T8A6NH00 312 aa19.3■□□□□ 0.68
RUNDC3A-201ENST00000225441 CSN3P07498 182 aa19.3■□□□□ 0.68
RUNDC3A-201ENST00000225441 ZNF138P52744 262 aa19.3■□□□□ 0.68
RUNDC3A-201ENST00000225441 C12orf54Q6X4T0 127 aa19.3■□□□□ 0.68
RUNDC3A-201ENST00000225441 ZNF502Q8TBZ5 544 aa19.3■□□□□ 0.68
RUNDC3A-201ENST00000225441 PRR31Q5SQ13 230 aa19.29■□□□□ 0.68
RUNDC3A-201ENST00000225441 LINC01356Q8N9X3 169 aa19.29■□□□□ 0.68
RUNDC3A-201ENST00000225441 PRELID3AQ96N28 172 aa19.29■□□□□ 0.68
RUNDC3A-201ENST00000225441 ATP6V0BQ99437 205 aa19.29■□□□□ 0.68
RUNDC3A-201ENST00000225441 SMAD5-AS1Q9Y6J3 95 aa19.29■□□□□ 0.68
RUNDC3A-201ENST00000225441 NBPF19A0A087WUL8 3843 aa19.28■□□□□ 0.68
RUNDC3A-201ENST00000225441 IGLC6P0CF74 106 aa19.28■□□□□ 0.68
RUNDC3A-201ENST00000225441 CNFNQ9BYD5 112 aa19.28■□□□□ 0.68
RUNDC3A-201ENST00000225441 UNC79Q9P2D8 2635 aa19.28■□□□□ 0.68
RUNDC3A-201ENST00000225441 FER1L6-AS1Q8NA97 138 aa19.28■□□□□ 0.68
RUNDC3A-201ENST00000225441 MAPK1IP1LQ8NDC0 245 aa19.28■□□□□ 0.68
RUNDC3A-201ENST00000225441 SLC50A1Q9BRV3 221 aa19.28■□□□□ 0.68
RUNDC3A-201ENST00000225441 TPPP3Q9BW30 176 aa19.28■□□□□ 0.68
RUNDC3A-201ENST00000225441 IGKV2-40A0A087WW87 121 aaPredicted RBP19.27■□□□□ 0.68
RUNDC3A-201ENST00000225441 hDV102S1A0JD36 115 aa19.27■□□□□ 0.68
RUNDC3A-201ENST00000225441 IGKV2D-40P01614 121 aaPredicted RBP19.27■□□□□ 0.68
RUNDC3A-201ENST00000225441 PPBPP02775 128 aa19.27■□□□□ 0.68
RUNDC3A-201ENST00000225441 HIF1ANQ9NWT6 349 aa19.27■□□□□ 0.68
RUNDC3A-201ENST00000225441 ABCA1O95477 2261 aa19.27■□□□□ 0.67
RUNDC3A-201ENST00000225441 D6R8Y8 96 aa19.26■□□□□ 0.67
RUNDC3A-201ENST00000225441 SIGLEC8Q9NYZ4 499 aa19.26■□□□□ 0.67
RUNDC3A-201ENST00000225441 VPS13CQ709C8 3753 aa19.25■□□□□ 0.67
RUNDC3A-201ENST00000225441 FABP5P3A8MUU1 101 aa19.25■□□□□ 0.67
RUNDC3A-201ENST00000225441 IGHG4P01861 327 aa19.25■□□□□ 0.67
RUNDC3A-201ENST00000225441 GATA3P23771 443 aa19.25■□□□□ 0.67
RUNDC3A-201ENST00000225441 MRPL51Q4U2R6 128 aaKnown RBP19.25■□□□□ 0.67
RUNDC3A-201ENST00000225441 MRPL53Q96EL3 112 aaKnown RBP19.25■□□□□ 0.67
RUNDC3A-201ENST00000225441 CENPVL3A0A0U1RRI6 287 aa19.24■□□□□ 0.67
RUNDC3A-201ENST00000225441 IFI27P40305 119 aaPredicted RBP19.24■□□□□ 0.67
RUNDC3A-201ENST00000225441 LGALS9BQ3B8N2 356 aa19.24■□□□□ 0.67
RUNDC3A-201ENST00000225441 PSMG4Q5JS54 123 aa19.24■□□□□ 0.67
RUNDC3A-201ENST00000225441 LGALS9CQ6DKI2 356 aa19.24■□□□□ 0.67
RUNDC3A-201ENST00000225441 UNQ5815/PRO19632Q6UWF5 114 aa19.24■□□□□ 0.67
RUNDC3A-201ENST00000225441 OR1N2Q8NGR9 330 aa19.24■□□□□ 0.67
RUNDC3A-201ENST00000225441 ZFAND3Q9H8U3 227 aa19.24■□□□□ 0.67
RUNDC3A-201ENST00000225441 WNK2Q9Y3S1 2297 aa19.24■□□□□ 0.67
RUNDC3A-201ENST00000225441 TMEM213A2RRL7 107 aa19.23■□□□□ 0.67
RUNDC3A-201ENST00000225441 HIST1H1AQ02539 215 aaPredicted RBP19.23■□□□□ 0.67
RUNDC3A-201ENST00000225441 ASCL2Q99929 193 aa19.23■□□□□ 0.67
RUNDC3A-201ENST00000225441 FOXC2Q99958 501 aa19.23■□□□□ 0.67
RUNDC3A-201ENST00000225441 BUB3O43684 328 aa19.23■□□□□ 0.67
RUNDC3A-201ENST00000225441 IGHV4-31P0DP07 118 aa19.23■□□□□ 0.67
RUNDC3A-201ENST00000225441 COX8AP10176 69 aa19.23■□□□□ 0.67
RUNDC3A-201ENST00000225441 UBE2V1Q13404 147 aa19.23■□□□□ 0.67
RUNDC3A-201ENST00000225441 C15orf32Q32M92 178 aa19.23■□□□□ 0.67
RUNDC3A-201ENST00000225441 WFDC11Q8NEX6 87 aa19.23■□□□□ 0.67
RUNDC3A-201ENST00000225441 LINC01546A6NGU7 62 aa19.22■□□□□ 0.67
RUNDC3A-201ENST00000225441 NPFFO15130 113 aa19.22■□□□□ 0.67
RUNDC3A-201ENST00000225441 IGHV3-23P01764 117 aa19.22■□□□□ 0.67
RUNDC3A-201ENST00000225441 LINC01559Q495D7 138 aa19.22■□□□□ 0.67
RUNDC3A-201ENST00000225441 AMN1Q8IY45 258 aa19.22■□□□□ 0.67
RUNDC3A-201ENST00000225441 AJUBAQ96IF1 538 aa19.22■□□□□ 0.67
RUNDC3A-201ENST00000225441 VGLL1Q99990 258 aa19.22■□□□□ 0.67
RUNDC3A-201ENST00000225441 PDZD2O15018 2839 aa19.22■□□□□ 0.67
RUNDC3A-201ENST00000225441 TRBV7-1A0A0A6YYK4 115 aa19.21■□□□□ 0.67
RUNDC3A-201ENST00000225441 HBDP02042 147 aa19.21■□□□□ 0.67
RUNDC3A-201ENST00000225441 SAA4P35542 130 aa19.21■□□□□ 0.67
RUNDC3A-201ENST00000225441 RHOGP84095 191 aa19.21■□□□□ 0.67
RUNDC3A-201ENST00000225441 MAP1AP78559 2803 aaPredicted RBP19.21■□□□□ 0.67
RUNDC3A-201ENST00000225441 HECTD1Q9ULT8 2610 aa19.21■□□□□ 0.67
RUNDC3A-201ENST00000225441 EEF1AKMT3Q96AZ1 226 aa19.21■□□□□ 0.67
RUNDC3A-201ENST00000225441 TMSB15BA0A087X1C1 80 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms