RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Ppp1r3cQ7TMB3 317 aa12.66□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Il22ra2Q80XF5 230 aa12.66□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Foxn4Q8K3Q3 521 aa12.66□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Slc37a1Q8R070 531 aa12.66□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Olfr1370Q8VFG4 316 aa12.66□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Ms4a3Q920C4 213 aa12.66□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Zfp958Q99LG7 467 aa12.66□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Xrcc3Q9CXE6 349 aa12.66□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Mrpl30Q9D7N6 160 aa12.66□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Ptpn13Q64512 2453 aa12.66□□□□□ -0.38
Ubp1-206ENSMUST00000216558 DysfQ9ESD7 2090 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 SonQ9QX47 2444 aaKnown RBP12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Olfr284A0A0U1RP76 321 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Olfr465-ps1A0A0U1RPZ4 315 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 F2rl2O08675 369 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Hmgb3O54879 200 aaKnown RBP12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Hist1h1aP43275 213 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Dnajc30P59041 219 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Sap30lQ5SQF8 182 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Hoxc12Q8K5B8 280 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Ptrh2Q8R2Y8 181 aaKnown RBP12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 0610009B22RikQ8R3W2 140 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Olfr877Q8VF62 311 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Olfr830Q8VFJ5 315 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Olfr1444Q8VFX2 319 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Elovl6Q920L5 267 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Cds2Q99L43 444 aa12.65□□□□□ -0.38
Ubp1-206ENSMUST00000216558 Gm7697A0A0J9YUH2 350 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Gm9495A0A0J9YUZ3 350 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 D930048N14RikA2AA67 225 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Cdc20bD3Z3I0 519 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 SftpcP21841 193 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 PmchP56942 165 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Defb18Q30KP5 85 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Sft2d1Q5SSN7 159 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Asphd2Q80VP9 343 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Igfbpl1Q80W15 270 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Sft2d2Q8VD57 159 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Tmem205Q91XE8 189 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 SvbpQ99LQ4 66 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Ms4a6cQ99N08 217 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 H2al3Q9D4U4 128 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Srp19Q9D7A6 144 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Ammecr1Q9JHT5 344 aaKnown RBP12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Csmd2V9GX34 3611 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Nav2E9Q842 2432 aa12.64□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Ighv5-17A0A075B5R1 117 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Ighv3-4A0A0A6YXF1 117 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 E430018J23RikE9PZQ8 461 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Vmn1r60G3UY47 300 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Spint5J3KMK8 105 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Hoxa1P09022 331 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Cpne2P59108 548 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Arf6P62331 175 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Dhrs2Q149L0 282 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Q504N7 393 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Dnd1Q6VY05 352 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Q8BN57 294 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Olfr1183Q8VFF8 303 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Sval2Q99N75 144 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Cox20Q9D7J4 117 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Trex2Q9R1A9 236 aa12.63□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Ighv14-4A0A0A6YVR1 117 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Inafm1E9PV59 130 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Olfr231E9Q0M4 307 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Klk1b22P15948 259 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Rnase11Q5GAM9 192 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Tgfbr1Q64729 503 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Srsf1Q6PDM2 248 aaKnown RBP12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Calm5Q6W3E0 140 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Cd200r4Q6XJV4 270 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Olfr1290Q7TQX8 312 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Scnm1Q8K136 229 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Olfr1368Q8VFG3 314 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Rab27bQ99P58 218 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Tmem147Q9CQG6 224 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 FibinQ9CQS3 217 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Gng13Q9JMF3 67 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Tusc2Q9WVF8 110 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Trbv19A0A0B4J1H4 117 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Cdc34bA0A140T8I4 237 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Olfr466E9Q2B9 308 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Gm21974F6W3F3 119 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 P04212 136 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Cd79bP15530 228 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 GbaP17439 515 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 KncnQ307W7 124 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Slc35e3Q6PGC7 313 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Ociad1Q9CRD0 247 aaKnown RBP12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Fkbp11Q9D1M7 201 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Osr1Q9WVG7 266 aa12.62□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Cacna1iE9Q7P2 2199 aa12.61□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Olfr1458A0A1L1SSD5 307 aa12.61□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Fcrl6A1YIY0 268 aa12.61□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Gm10665K7N6B7 321 aa12.61□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Rps16P14131 146 aaKnown RBP12.61□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Tpsb2P21845 276 aa12.61□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Sssca1P56873 199 aa12.61□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Lmo4P61969 165 aa12.61□□□□□ -0.39
Ubp1-206ENSMUST00000216558 Serf2P84102 59 aa12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 100.2 ms