RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Prr23a3Q9CWP9 254 aa15.11■□□□□ 0.01
Pcf11-201ENSMUST00000119954 5530401A14RikQ9D3H9 131 aa15.11■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Tcf23Q9JLR5 209 aa15.11■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Urb1Q571H0 2274 aaKnown RBP15.11■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Irf2bp2E9Q1P8 570 aa15.11■□□□□ 0.01
Pcf11-201ENSMUST00000119954 H2-Ab1P01921 265 aa15.11■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Foxa3P35584 353 aa15.11■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Tspan13Q9D8C2 204 aa15.11■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Tmem126aQ9D8Y1 196 aa15.11■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Tex38A2A8T7 201 aa15.1■□□□□ 0.01
Pcf11-201ENSMUST00000119954 TbpP29037 316 aa15.1■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Sox15P43267 231 aa15.1■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Defa16P50714 93 aa15.1■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Immp2lQ8BPT6 175 aa15.1■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Gm39566A0A1B0GT45 1251 aa15.1■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Zfp764E9QAP1 431 aa15.1■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Crispld2Q8BZQ2 495 aa15.1■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Insig2Q91WG1 225 aa15.1■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Olfr968Q8VFN4 314 aa15.1■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Znf385aQ8VD12 386 aaKnown RBP15.1■□□□□ 0.01
Pcf11-201ENSMUST00000119954 4930447A16RikQ9D5F6 132 aa15.1■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Gm21394Q497R7 227 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Pef1Q8BFY6 275 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Lhfpl6Q8BM86 200 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Tlcd2Q8VC26 310 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Rtn4rQ99PI8 473 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Trbv17A0A140T8P8 114 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Hoxb3P09026 433 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Olfr1380Q7TQT5 311 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Olfr498Q8VEW2 330 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Ndufb3Q9CQZ6 104 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Fmc1Q9CR13 113 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Zfp2P08043 459 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Cxcl1P12850 96 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Negr1Q80Z24 348 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Gm10190Q8BSD7 107 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Nup35Q8R4R6 325 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Defb8Q91V82 60 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Lims1Q99JW4 325 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Chd5A2A8L1 1946 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Gm45717A0A1B0GT68 152 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Igsf23B2RTN2 239 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Zfp936Q3ULA8 456 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Tmem189Q99LQ7 271 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Trem3Q9JKE1 183 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Dlg5E9Q9R9 1921 aa15.09■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Rpl36-ps4A0A140T8U4 117 aa15.08■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Gm21900J3QP38 180 aa15.08■□□□□ 0.01
Pcf11-201ENSMUST00000119954 A630076J17RikJ3QQ32 107 aa15.08■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Olfr322Q5NCC8 327 aa15.08■□□□□ 0.01
Pcf11-201ENSMUST00000119954 Ighv14-3A0A075B5R9 117 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 Rpl27aP14115 148 aaKnown RBP15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 HhexP43120 271 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 Sumo2P61957 95 aaKnown RBP15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 C1saQ8CG14 688 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 Trdv2-1A0A0G2JGB9 116 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 Olfr92L7N475 312 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 CortP56469 109 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 Q8BG31 207 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 Pcp4P63054 62 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 Tcrg-C2A0A075B5Z2 167 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 Vmn1r232A2RTT5 351 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 P01635 115 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 P01853 167 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 Rnase9P60154 184 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 Mrps18cQ8R2L5 143 aaKnown RBP15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 Tmem101Q91VP7 257 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 Siglec12Q91Y57 467 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 RprmQ9JJ72 109 aa15.08■□□□□ 0
Pcf11-201ENSMUST00000119954 Cd81P35762 236 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Rnf151Q9CQ29 239 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Shisal2bQ9D1Y9 158 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Psg18B2RSG7 476 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 PspnO70300 156 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 P18530 117 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Apobec4Q497M3 374 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Lipt2Q9D009 231 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Alpk3Q924C5 1678 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Olfr810Q8VFH9 312 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Olfr559Q8VH14 318 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 D430041D05RikF6ZGR6 1678 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Trav7-5A0A0G2JFX6 112 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Tmem54Q9D7S1 219 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Olfr1192-ps1A0A1L1SRD7 309 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 1700015F17RikD3YUK8 150 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Ifitm5O88728 134 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Spint3Q3UW09 88 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Elovl5Q8BHI7 299 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 D630044L22RikQ8C701 164 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 BC106179Q8C9L1 186 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Ormdl3Q9CPZ6 153 aa15.07■□□□□ 0
Pcf11-201ENSMUST00000119954 Rnf182Q8C432 247 aa15.06■□□□□ 0
Pcf11-201ENSMUST00000119954 C2cd4aE9Q861 334 aa15.06■□□□□ 0
Pcf11-201ENSMUST00000119954 P04212 136 aa15.06■□□□□ 0
Pcf11-201ENSMUST00000119954 Hmga2P52927 108 aa15.06■□□□□ 0
Pcf11-201ENSMUST00000119954 Trav15-1-dv6-1Q5R1D2 117 aa15.06■□□□□ 0
Pcf11-201ENSMUST00000119954 Ly6g6eQ8K1T6 166 aa15.06■□□□□ 0
Pcf11-201ENSMUST00000119954 Egr4Q9WUF2 478 aa15.06■□□□□ 0
Pcf11-201ENSMUST00000119954 TinagQ9WUR0 475 aa15.06■□□□□ 0
Pcf11-201ENSMUST00000119954 Slc17a3G3UWD9 498 aa15.06■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms